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author | Pjotr Prins | 2020-04-27 17:14:37 -0500 |
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committer | Pjotr Prins | 2020-04-27 17:14:37 -0500 |
commit | 13942f9229ff623ddde98ae9d328fc8492f210fa (patch) | |
tree | 70034917d552d4f8994d32f308522824f36d2ae6 /README.md | |
parent | e05b70e1a9aaea5e71d4f616ad86e5625a0cdb4c (diff) | |
parent | caa9966df61a9e4290d36af557adc3ede1a3674b (diff) | |
download | genenetwork2-gn-master.tar.gz |
Mergedgn-master
Diffstat (limited to 'README.md')
-rw-r--r-- | README.md | 11 |
1 files changed, 5 insertions, 6 deletions
@@ -25,16 +25,15 @@ Once installed GN2 can be run online through a browser interface genenetwork2 ``` -(default is http://localhost:5003/). For full examples (you'll need to -set a number of environment variables), including running scripts and -a Python REPL, for example +(default is http://localhost:5003/). A quick example is ```sh -env GN2_PROFILE=~/opt/gn-latest GENENETWORK_FILES=~/data/gn2_data ./bin/genenetwork2 +env GN2_PROFILE=~/opt/gn-latest SERVER_PORT=5300 GENENETWORK_FILES=~/data/gn2_data/ ./bin/genenetwork2 ./etc/default_settings.py -gunicorn-dev ``` -see the startup script -[./bin/genenetwork2](https://github.com/genenetwork/genenetwork2/blob/testing/bin/genenetwork2). +For full examples (you may need to set a number of environment +variables), including running scripts and a Python REPL, also see the +startup script [./bin/genenetwork2](https://github.com/genenetwork/genenetwork2/blob/testing/bin/genenetwork2). Also Mysql and Elasticsearch need to be running, see [INSTALL](./doc/README.org). |