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| author | zsloan | 2021-04-29 21:38:07 +0000 |
|---|---|---|
| committer | zsloan | 2021-04-29 21:38:07 +0000 |
| commit | 97663c7d0aa4b457948301849a46e6d9b42664c9 (patch) | |
| tree | 01f1510bd5ee519b11513adaf1f614ac2d2554cb | |
| parent | 1a7bb988ee360b3ef48e22e25b419c375dccb9fa (diff) | |
| download | genenetwork2-97663c7d0aa4b457948301849a46e6d9b42664c9.tar.gz | |
Changed the way sample data is fetched for network graph to include parents/f1s
| -rw-r--r-- | wqflask/wqflask/network_graph/network_graph.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/wqflask/wqflask/network_graph/network_graph.py b/wqflask/wqflask/network_graph/network_graph.py index 132e1884..ca3d5bb3 100644 --- a/wqflask/wqflask/network_graph/network_graph.py +++ b/wqflask/wqflask/network_graph/network_graph.py @@ -27,7 +27,6 @@ from utility import helper_functions from utility import corr_result_helpers from utility.tools import GN2_BRANCH_URL - class NetworkGraph(object): def __init__(self, start_vars): @@ -69,7 +68,7 @@ class NetworkGraph(object): this_trait = trait_db[0] this_db = trait_db[1] - this_db_samples = this_db.group.samplelist + this_db_samples = this_db.group.all_samples_ordered() this_sample_data = this_trait.data corr_result_row = [] @@ -80,7 +79,8 @@ class NetworkGraph(object): for target in self.trait_list: target_trait = target[0] target_db = target[1] - target_samples = target_db.group.samplelist + + target_samples = target_db.group.all_samples_ordered() target_sample_data = target_trait.data |