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| author | zsloan | 2021-05-27 20:08:14 +0000 |
|---|---|---|
| committer | zsloan | 2021-05-27 20:08:14 +0000 |
| commit | 6a54fa84542458fe8cfd288bf4c507214a1ddd04 (patch) | |
| tree | a7e07746a8055f462531772bbf75a9346aa48c37 | |
| parent | 92f84ab7c544ac9d7ffdbf302cf35b8b67ef7819 (diff) | |
| download | genenetwork2-6a54fa84542458fe8cfd288bf4c507214a1ddd04.tar.gz | |
Make all attribute names lowercase to deal with situations where sometimes they're lower-case and other times not
| -rw-r--r-- | wqflask/wqflask/marker_regression/run_mapping.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/wqflask/wqflask/marker_regression/run_mapping.py b/wqflask/wqflask/marker_regression/run_mapping.py index d727e3ff..c5b980a7 100644 --- a/wqflask/wqflask/marker_regression/run_mapping.py +++ b/wqflask/wqflask/marker_regression/run_mapping.py @@ -765,9 +765,9 @@ def get_perm_strata(this_trait, sample_list, categorical_vars, used_samples): if sample in list(sample_list.sample_attribute_values.keys()): combined_string = "" for var in categorical_vars: - if var in list(sample_list.sample_attribute_values[sample].keys()): + if var.lower() in sample_list.sample_attribute_values[sample]: combined_string += str( - sample_list.sample_attribute_values[sample][var]) + sample_list.sample_attribute_values[sample][var.lower()]) else: combined_string += "NA" else: |