diff options
| author | Alexander_Kabui | 2022-09-20 15:56:06 +0300 |
|---|---|---|
| committer | Alexander_Kabui | 2022-09-20 15:56:06 +0300 |
| commit | 628cbe8f4dae4e3f7f91e135943d17e8be427eb2 (patch) | |
| tree | 9c658c8106c3e70319c57388536e94d39d793185 | |
| parent | 37fa005a7561bc225c45a9ffc32d1c353d846e7e (diff) | |
| download | genenetwork2-628cbe8f4dae4e3f7f91e135943d17e8be427eb2.tar.gz | |
store text files in TMPDIR
| -rw-r--r-- | wqflask/wqflask/correlation/pre_computes.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/wqflask/wqflask/correlation/pre_computes.py b/wqflask/wqflask/correlation/pre_computes.py index 6d5e5f04..afcea88f 100644 --- a/wqflask/wqflask/correlation/pre_computes.py +++ b/wqflask/wqflask/correlation/pre_computes.py @@ -171,7 +171,7 @@ def get_datasets_data(base_dataset, target_dataset_data): return (target_results, base_results) -def fetch_text_file(dataset_name, conn, text_dir=TEXTDIR): +def fetch_text_file(dataset_name, conn, text_dir=TMPDIR): """fetch textfiles with strain vals if exists""" with conn.cursor() as cursor: @@ -207,7 +207,7 @@ def read_text_file(sample_dict, file_path): return (sample_vals, [",".join([line[i] for i in _posit]) for line in csv_reader]) -def write_db_to_textfile(db_name, conn, text_dir=TEXTDIR): +def write_db_to_textfile(db_name, conn, text_dir=TMPDIR): def __generate_file_name__(db_name): # todo add expiry time and checker |