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authorFrederick Muriuki Muriithi2022-12-02 07:29:31 +0300
committerFrederick Muriuki Muriithi2022-12-02 07:29:31 +0300
commit585208eca2764e33e70da05875c8e08ccbf91bf1 (patch)
tree559773fb3536b5bff41925752e0973c5e0bb34c2
parentc02d027dbd6476d375821e7dcbe3a719252ca092 (diff)
downloadgenenetwork2-585208eca2764e33e70da05875c8e08ccbf91bf1.tar.gz
correlations: display "--" whenever "lit_corr" is None
* wqflask/wqflask/correlation/show_corr_results.py: Check for `None` and display "--" in its place.
-rw-r--r--wqflask/wqflask/correlation/show_corr_results.py4
1 files changed, 3 insertions, 1 deletions
diff --git a/wqflask/wqflask/correlation/show_corr_results.py b/wqflask/wqflask/correlation/show_corr_results.py
index 95952d33..8b1f557a 100644
--- a/wqflask/wqflask/correlation/show_corr_results.py
+++ b/wqflask/wqflask/correlation/show_corr_results.py
@@ -218,7 +218,9 @@ def populate_table(dataset_metadata, target_dataset, this_dataset, corr_results,
results_dict['tissue_pvalue'] = "--"
if this_dataset['type'] == "ProbeSet":
if 'lit_corr' in trait:
- results_dict['lit_corr'] = f"{float(trait['lit_corr']):.3f}"
+ results_dict['lit_corr'] = (
+ f"{float(trait['lit_corr']):.3f}"
+ if trait["lit_corr"] else "--")
if 'tissue_corr' in trait:
results_dict['tissue_corr'] = f"{float(trait['tissue_corr']):.3f}"
results_dict['tissue_pvalue'] = f"{float(trait['tissue_p_val']):.3e}"