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| author | Pjotr Prins | 2016-04-26 11:29:42 +0000 |
|---|---|---|
| committer | Pjotr Prins | 2016-04-26 11:29:42 +0000 |
| commit | 95a797509caae727ae204861e5aa9402fdd9ecc4 (patch) | |
| tree | 8b364487e21d73088df570c5eb2ed6ff7c2a6834 | |
| parent | 9001d7575cef0dcb0aaecfa15e8c242873fae01e (diff) | |
| download | genenetwork2-95a797509caae727ae204861e5aa9402fdd9ecc4.tar.gz | |
Interval mapping: fix font and image path
| -rw-r--r-- | wqflask/wqflask/marker_regression/marker_regression_gn1.py | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/wqflask/wqflask/marker_regression/marker_regression_gn1.py b/wqflask/wqflask/marker_regression/marker_regression_gn1.py index 11e312b2..97e4b934 100644 --- a/wqflask/wqflask/marker_regression/marker_regression_gn1.py +++ b/wqflask/wqflask/marker_regression/marker_regression_gn1.py @@ -42,6 +42,7 @@ from utility import webqtlUtil from utility import helper_functions from utility import Plot from wqflask.interval_analyst import GeneUtil +from base.webqtlConfig import TMPDIR, GENERATED_TEXT_DIR, GENERATED_IMAGE_DIR ######################################### # Inteval Mapping Plot Page @@ -930,7 +931,7 @@ class MarkerRegression(object): bootScale = bootScale[:-1] + [highestPercent] bootOffset = 50*fontZoom - bootScaleFont=Font(ttf="verdana",size=13*fontZoom,bold=0) + bootScaleFont=pid.Font(ttf="verdana",size=13*fontZoom,bold=0) canvas.drawRect(canvas.size[0]-bootOffset,yZero-bootHeightThresh,canvas.size[0]-bootOffset-15*zoom,yZero,fillColor = pid.yellow) canvas.drawLine(canvas.size[0]-bootOffset+4, yZero, canvas.size[0]-bootOffset, yZero, color=pid.black) canvas.drawString('0%' ,canvas.size[0]-bootOffset+10,yZero+5,font=bootScaleFont,color=pid.black) @@ -2581,7 +2582,7 @@ class MarkerRegression(object): Plot.plotBar(myCanvas, perm_output, XLabel=self.LRS_LOD, YLabel='Frequency', title=' Histogram of Permutation Test') filename= webqtlUtil.genRandStr("Reg_") - myCanvas.save(webqtlConfig.IMGDIR+filename, format='gif') + myCanvas.save(GENERATED_IMAGE_DIR+filename, format='gif') return filename |