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authorzsloan2019-08-16 16:27:13 -0500
committerzsloan2019-08-16 16:27:13 -0500
commit8ba8aae772f24589968ee8d9a034ac46ed7d591e (patch)
tree351176fb1b9bd229c0edd7a4b47b24559492f61e
parentf7204a2ddc3a8115651b9bca2c29e735034cfa21 (diff)
downloadgenenetwork2-8ba8aae772f24589968ee8d9a034ac46ed7d591e.tar.gz
Added text for LOD searches back to index page
-rwxr-xr-xwqflask/wqflask/templates/index_page_orig.html6
1 files changed, 3 insertions, 3 deletions
diff --git a/wqflask/wqflask/templates/index_page_orig.html b/wqflask/wqflask/templates/index_page_orig.html
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--- a/wqflask/wqflask/templates/index_page_orig.html
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@@ -150,14 +150,14 @@
<li><b>RANGE=(1.5 2.5)</b> in the <b>Any</b> field finds traits with values with a specified fold-range (minimum = 1).
Useful for finding "housekeeping genes" <b>(1.0 1.2)</b> or highly variable molecular assays <b>(10 100)</b>.</li>
- <li><b>LRS=(15 1000)</b> finds all traits with peak LRS scores between lower and upper limits.</li>
+ <li><b>LRS=(15 1000)</b> or <b>LOD=(2 8)</b> finds all traits with peak LRS or LOD scores between lower and upper limits.</li>
<li><b>LRS=(9 999 Chr4 122 155)</b> finds all traits on Chr 4 from 122 and 155 Mb with LRS scores between 9 and 999.</li>
- <li><b>cisLRS=(15 1000 5)</b> finds all cis eQTLs with peak LRS scores between lower and upper limits,
+ <li><b>cisLRS=(15 1000 5)</b> or <b>cisLOD=(2 8 5)</b> finds all cis eQTLs with peak LRS or LOD scores between lower and upper limits,
with an <b>inclusion</b> zone of 5 Mb around the parent gene.</li>
- <li><b>transLRS=(15 1000 5)</b> finds all trans eQTLs with peak LRS scores between lower and upper limits,
+ <li><b>transLRS=(15 1000 5)</b> or <b>transLOD=(2 8 5)</b> finds all trans eQTLs with peak LRS or LOD scores between lower and upper limits,
with an <b>exclusion</b> zone of 5 Mb around the parent gene.</li>
<li><b>POSITION=(Chr4 122 130) cisLRS=(9 999 10)</b>