From 8ba8aae772f24589968ee8d9a034ac46ed7d591e Mon Sep 17 00:00:00 2001 From: zsloan Date: Fri, 16 Aug 2019 16:27:13 -0500 Subject: Added text for LOD searches back to index page --- wqflask/wqflask/templates/index_page_orig.html | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/wqflask/wqflask/templates/index_page_orig.html b/wqflask/wqflask/templates/index_page_orig.html index 3b008d83..bdf51bf8 100755 --- a/wqflask/wqflask/templates/index_page_orig.html +++ b/wqflask/wqflask/templates/index_page_orig.html @@ -150,14 +150,14 @@
  • RANGE=(1.5 2.5) in the Any field finds traits with values with a specified fold-range (minimum = 1). Useful for finding "housekeeping genes" (1.0 1.2) or highly variable molecular assays (10 100).
    • -
  • LRS=(15 1000) finds all traits with peak LRS scores between lower and upper limits.
    • +
  • LRS=(15 1000) or LOD=(2 8) finds all traits with peak LRS or LOD scores between lower and upper limits.
  • LRS=(9 999 Chr4 122 155) finds all traits on Chr 4 from 122 and 155 Mb with LRS scores between 9 and 999.
    • -
  • cisLRS=(15 1000 5) finds all cis eQTLs with peak LRS scores between lower and upper limits, +
  • cisLRS=(15 1000 5) or cisLOD=(2 8 5) finds all cis eQTLs with peak LRS or LOD scores between lower and upper limits, with an inclusion zone of 5 Mb around the parent gene.
    • -
  • transLRS=(15 1000 5) finds all trans eQTLs with peak LRS scores between lower and upper limits, +
  • transLRS=(15 1000 5) or transLOD=(2 8 5) finds all trans eQTLs with peak LRS or LOD scores between lower and upper limits, with an exclusion zone of 5 Mb around the parent gene.
  • POSITION=(Chr4 122 130) cisLRS=(9 999 10) -- cgit v1.2.3