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Diffstat (limited to 'templates/index.html')
| -rw-r--r-- | templates/index.html | 27 |
1 files changed, 16 insertions, 11 deletions
diff --git a/templates/index.html b/templates/index.html index 5849be9..501cdef 100644 --- a/templates/index.html +++ b/templates/index.html @@ -2,7 +2,7 @@ {% block content %} {{ message | safe }} -<h3> Mining Gene Relationships from PubMed using Custom Ontologies </h3> +<h3> Mining PubMed for Gene Relationships using Custom Ontologies </h3> <div class="row"> <div class="col-md-9"> @@ -14,11 +14,12 @@ <!--Gene alias often include non-specific words and are thus not included in the initial search. However, a list of alias can be found by clicking on the gene symbol in the results section. These alias then can be searched with a single click. --> - As an example, we present a curated ontology for drug addiction with over <a href="/ontology"> 300 keywords organized into seven categories. - </a> A user account (free) is needed to create custom ontologies and save the search results. + As an example, we present a curated ontology for drug addiction with over <a href="/ontology"> 300 keywords organized into seven categories.</a> + Furthermore, <b>deep learning </b> is used to distinguish automatically the sentences describing systemic stress from those describing cellular stress. + A user account (free) is needed to create custom ontologies and save the search results. </p> - <p>Example: </b><a href=/progress?type=GWAS&type=addiction&type=drug&type=brain&type=stress&type=psychiatric&type=cell&type=function&query=Rgma+Nrxn3>Rgma Nrxn3</a>.</p> + <p>Example: </b><a href=/progress?type=GWAS&type=addiction&type=drug&type=brain&type=stress&type=psychiatric&type=cell&type=function&query=Rgma+Penk>Rgma Penk</a>.</p> {%if ("name" not in session) %} By default, the <a href="/ontology">addiction</a> ontology is used. Custom ontologies can be created in user accounts. @@ -34,14 +35,18 @@ {% else %} Welcome back, <b> {{session['name']}}</b>. Your <a href="/userarchive"> previous searches </a> and <a href="/ontoarchive"> custom ontologies </a> are available from the links. - + <br> + Please select an ontology to use for the new search <form action="/index_ontology"> - <div id="onto_selection">Please select an ontology to use for the new search</div> - <button type="submit" class="btn btn-secondary btn-sm">Select</button> + <table><td> + <div id="onto_selection"></div> + </td><td> + <button type="submit" class="btn btn-secondary btn-sm">Select</button> + </td></table> </form> - - The <font color="tomato"> <strong>{{ontol}}</strong> </font> ontology is selected. Please choose categories to be included in the search. - Expect a longer wait time when you include <b>Human GWAS</b> category. + <br> + The <font size="5em" color="tomato"> <strong>{{ontol}}</strong> </font> ontology is selected. Please choose categories to be included in the search. + Expect a longer wait time when you include <b>GWAS</b> category. <form action="/progress"> <div id="check_selection"></div> @@ -69,7 +74,7 @@ {%for ky in dict_onto.keys()%} checkbox += '<strong><input type="checkbox" name="type" value="{{ky}}" checked> {{ky}}    </strong>'; {% endfor %} - checkbox += ' <strong><input type="checkbox" name="type" value="GWAS" checked> Human GWAS    </strong><strong><input type="checkbox" onClick="toggle(this)"/> (Un)select all' + checkbox += '<strong><input type="checkbox" onClick="toggle(this)"/> (Un)select all' newdiv.innerHTML = "<inout name='type' id='onto'> "+checkbox + " </input> "; document.getElementById('check_selection').appendChild(newdiv); </script> |