diff options
Diffstat (limited to 'sourcecodes/data')
87 files changed, 7301 insertions, 3110 deletions
diff --git a/sourcecodes/data/example1/Bqxmap.txt b/sourcecodes/data/example1/Bqxmap.txt index 032b8928..dc9ba9be 100644 --- a/sourcecodes/data/example1/Bqxmap.txt +++ b/sourcecodes/data/example1/Bqxmap.txt @@ -1,8 +1,8 @@ -Geno1 1 0.473175 1.335000 -Geno2 2 0.496318 1.570000 -Trait1 1 0.668009 -0.023903 -Trait2 1 0.796873 0.038552 -Trait3 2 1.036694 0.068708 -Trait4 1 0.984008 -0.010125 -Trait5 1 0.316471 0.008911 -Trait6 1 0.904542 -0.114267 +Geno1 0.473175 1.335000 +Geno2 0.496318 1.570000 +Trait1 0.668009 -0.023903 +Trait2 0.796873 0.038552 +Trait3 1.036694 0.068708 +Trait4 0.984008 -0.010125 +Trait5 0.316471 0.008911 +Trait6 0.904542 -0.114267 diff --git a/sourcecodes/data/example1/Bqxparameters.txt b/sourcecodes/data/example1/Bqxparameters.txt new file mode 100644 index 00000000..d1345709 --- /dev/null +++ b/sourcecodes/data/example1/Bqxparameters.txt @@ -0,0 +1,34 @@ +Geno1 +Discrete node with 2 states +1 0.6650 +2 0.3350 + +Geno2 +Discrete node with 2 states +1 0.4300 +2 0.5700 + +Trait1 +Continuous node +-0.0239 0.6720 + +Trait2 +Continuous node +0.0386 0.8009 + +Trait3 +Continuous node +0.0687 1.0420 + +Trait4 +Continuous node +-0.0081 1.0133 + +Trait5 +Continuous node +0.0089 0.3181 + +Trait6 +Continuous node +-0.1143 0.9091 + diff --git a/sourcecodes/data/example2/hQGmap.txt b/sourcecodes/data/example2/hQGmap.txt index 032b8928..dc9ba9be 100644 --- a/sourcecodes/data/example2/hQGmap.txt +++ b/sourcecodes/data/example2/hQGmap.txt @@ -1,8 +1,8 @@ -Geno1 1 0.473175 1.335000 -Geno2 2 0.496318 1.570000 -Trait1 1 0.668009 -0.023903 -Trait2 1 0.796873 0.038552 -Trait3 2 1.036694 0.068708 -Trait4 1 0.984008 -0.010125 -Trait5 1 0.316471 0.008911 -Trait6 1 0.904542 -0.114267 +Geno1 0.473175 1.335000 +Geno2 0.496318 1.570000 +Trait1 0.668009 -0.023903 +Trait2 0.796873 0.038552 +Trait3 1.036694 0.068708 +Trait4 0.984008 -0.010125 +Trait5 0.316471 0.008911 +Trait6 0.904542 -0.114267 diff --git a/sourcecodes/data/example2/hQGparameters.txt b/sourcecodes/data/example2/hQGparameters.txt new file mode 100644 index 00000000..4cffac4a --- /dev/null +++ b/sourcecodes/data/example2/hQGparameters.txt @@ -0,0 +1,34 @@ +Geno1 +Discrete node with 2 states +1 0.6650 +2 0.3350 + +Geno2 +Discrete node with 2 states +1 0.4300 +2 0.5700 + +Trait1 +Continuous node +-0.0239 0.6720 + +Trait2 +Continuous node +0.0386 0.8009 + +Trait3 +Continuous node +0.0687 1.0419 + +Trait4 +Continuous node +-0.0081 1.0133 + +Trait5 +Continuous node +0.0089 0.3181 + +Trait6 +Continuous node +-0.1143 0.9091 + diff --git a/sourcecodes/data/example_chl/bWRmap.txt b/sourcecodes/data/example_chl/bWRmap.txt index b872d2f0..b24eae2f 100644 --- a/sourcecodes/data/example_chl/bWRmap.txt +++ b/sourcecodes/data/example_chl/bWRmap.txt @@ -1,5 +1,5 @@ -Ctrq3 2 0.487652 1.365854 -MAS 1 0.355012 0.479560 -Neutrophil 1 10.929756 15.048780 -Load 1 0.825354 4.077143 -Weight 1 0.088036 0.877077 +Ctrq3 0.487652 1.365854 +MAS 0.355012 0.479560 +Neutrophil 10.929756 15.048780 +Load 0.825354 4.077143 +Weight 0.088036 0.877077 diff --git a/sourcecodes/data/example_chl/bWRnet_figure.txt b/sourcecodes/data/example_chl/bWRnet_figure.txt index 1798da4f..6a3a1dbc 100644 --- a/sourcecodes/data/example_chl/bWRnet_figure.txt +++ b/sourcecodes/data/example_chl/bWRnet_figure.txt @@ -15,419 +15,419 @@ MAS 1 250 150 1 1 2 3 4 --2.2595 0.0292 --2.2129 0.0326 --2.1662 0.0362 --2.1196 0.0401 --2.0729 0.0443 --2.0263 0.0489 --1.9796 0.0539 --1.9330 0.0592 --1.8863 0.0648 --1.8397 0.0709 --1.7930 0.0774 --1.7464 0.0842 --1.6997 0.0915 --1.6531 0.0992 --1.6064 0.1072 --1.5598 0.1157 --1.5131 0.1246 --1.4665 0.1338 --1.4199 0.1434 --1.3732 0.1534 --1.3266 0.1636 --1.2799 0.1742 --1.2333 0.1850 --1.1866 0.1961 --1.1400 0.2074 --1.0933 0.2188 --1.0467 0.2303 --1.0000 0.2419 --0.9534 0.2535 --0.9067 0.2651 --0.8601 0.2766 --0.8134 0.2879 --0.7668 0.2991 --0.7201 0.3099 --0.6735 0.3205 --0.6268 0.3307 --0.5802 0.3404 --0.5335 0.3496 --0.4869 0.3583 --0.4402 0.3663 --0.3936 0.3737 --0.3470 0.3804 --0.3003 0.3864 --0.2537 0.3916 --0.2070 0.3959 --0.1604 0.3994 --0.1137 0.4021 --0.0671 0.4038 --0.0204 0.4047 -0.0262 0.4046 -0.0729 0.4037 -0.1195 0.4018 -0.1662 0.3991 -0.2128 0.3954 -0.2595 0.3910 -0.3061 0.3857 -0.3528 0.3797 -0.3994 0.3729 -0.4461 0.3654 -0.4927 0.3572 -0.5394 0.3485 -0.5860 0.3392 -0.6327 0.3294 -0.6793 0.3192 -0.7259 0.3086 -0.7726 0.2977 -0.8192 0.2865 -0.8659 0.2752 -0.9125 0.2637 -0.9592 0.2521 -1.0058 0.2405 -1.0525 0.2289 -1.0991 0.2173 -1.1458 0.2059 -1.1924 0.1947 -1.2391 0.1837 -1.2857 0.1729 -1.3324 0.1623 -1.3790 0.1521 -1.4257 0.1422 -1.4723 0.1326 -1.5190 0.1234 -1.5656 0.1146 -1.6123 0.1062 -1.6589 0.0982 -1.7056 0.0906 -1.7522 0.0834 -1.7989 0.0765 -1.8455 0.0701 -1.8921 0.0641 -1.9388 0.0585 -1.9854 0.0532 -2.0321 0.0483 -2.0787 0.0438 -2.1254 0.0396 -2.1720 0.0357 -2.2187 0.0321 -2.2653 0.0288 -2.3120 0.0258 -2.3586 0.0231 -2.4053 0.0206 +-0.3226 0.0292 +-0.3060 0.0326 +-0.2895 0.0362 +-0.2729 0.0401 +-0.2564 0.0443 +-0.2398 0.0489 +-0.2232 0.0539 +-0.2067 0.0592 +-0.1901 0.0648 +-0.1735 0.0709 +-0.1570 0.0774 +-0.1404 0.0842 +-0.1239 0.0915 +-0.1073 0.0992 +-0.0907 0.1072 +-0.0742 0.1157 +-0.0576 0.1246 +-0.0411 0.1338 +-0.0245 0.1434 +-0.0079 0.1534 +0.0086 0.1636 +0.0252 0.1742 +0.0417 0.1850 +0.0583 0.1961 +0.0749 0.2074 +0.0914 0.2188 +0.1080 0.2303 +0.1245 0.2419 +0.1411 0.2535 +0.1577 0.2651 +0.1742 0.2766 +0.1908 0.2879 +0.2073 0.2991 +0.2239 0.3099 +0.2405 0.3205 +0.2570 0.3307 +0.2736 0.3404 +0.2901 0.3496 +0.3067 0.3583 +0.3233 0.3663 +0.3398 0.3737 +0.3564 0.3804 +0.3729 0.3864 +0.3895 0.3916 +0.4061 0.3959 +0.4226 0.3994 +0.4392 0.4021 +0.4558 0.4038 +0.4723 0.4047 +0.4889 0.4046 +0.5054 0.4037 +0.5220 0.4018 +0.5386 0.3991 +0.5551 0.3954 +0.5717 0.3910 +0.5882 0.3857 +0.6048 0.3797 +0.6214 0.3729 +0.6379 0.3654 +0.6545 0.3572 +0.6710 0.3485 +0.6876 0.3392 +0.7042 0.3294 +0.7207 0.3192 +0.7373 0.3086 +0.7538 0.2977 +0.7704 0.2865 +0.7870 0.2752 +0.8035 0.2637 +0.8201 0.2521 +0.8366 0.2405 +0.8532 0.2289 +0.8698 0.2173 +0.8863 0.2059 +0.9029 0.1947 +0.9194 0.1837 +0.9360 0.1729 +0.9526 0.1623 +0.9691 0.1521 +0.9857 0.1422 +1.0022 0.1326 +1.0188 0.1234 +1.0354 0.1146 +1.0519 0.1062 +1.0685 0.0982 +1.0851 0.0906 +1.1016 0.0834 +1.1182 0.0765 +1.1347 0.0701 +1.1513 0.0641 +1.1679 0.0585 +1.1844 0.0532 +1.2010 0.0483 +1.2175 0.0438 +1.2341 0.0396 +1.2507 0.0357 +1.2672 0.0321 +1.2838 0.0288 +1.3003 0.0258 +1.3169 0.0231 +1.3335 0.0206 Load 1 250 150 2 1 2 0 --3.0935 0.0030 --3.0388 0.0036 --2.9842 0.0043 --2.9295 0.0050 --2.8748 0.0059 --2.8202 0.0069 --2.7655 0.0081 --2.7108 0.0094 --2.6562 0.0110 --2.6015 0.0127 --2.5469 0.0147 --2.4922 0.0169 --2.4375 0.0194 --2.3829 0.0222 --2.3282 0.0253 --2.2735 0.0287 --2.2189 0.0326 --2.1642 0.0368 --2.1095 0.0415 --2.0549 0.0466 --2.0002 0.0522 --1.9456 0.0583 --1.8909 0.0649 --1.8362 0.0720 --1.7816 0.0797 --1.7269 0.0879 --1.6722 0.0966 --1.6176 0.1059 --1.5629 0.1158 --1.5083 0.1261 --1.4536 0.1370 --1.3989 0.1484 --1.3443 0.1602 --1.2896 0.1724 --1.2349 0.1850 --1.1803 0.1979 --1.1256 0.2111 --1.0709 0.2244 --1.0163 0.2379 --0.9616 0.2514 --0.9070 0.2649 --0.8523 0.2782 --0.7976 0.2914 --0.7430 0.3042 --0.6883 0.3166 --0.6336 0.3285 --0.5790 0.3398 --0.5243 0.3504 --0.4697 0.3603 --0.4150 0.3693 --0.3603 0.3774 --0.3057 0.3845 --0.2510 0.3905 --0.1963 0.3954 --0.1417 0.3992 --0.0870 0.4017 --0.0323 0.4031 -0.0223 0.4032 -0.0770 0.4021 -0.1316 0.3997 -0.1863 0.3962 -0.2410 0.3915 -0.2956 0.3857 -0.3503 0.3788 -0.4050 0.3709 -0.4596 0.3620 -0.5143 0.3523 -0.5689 0.3418 -0.6236 0.3306 -0.6783 0.3188 -0.7329 0.3065 -0.7876 0.2937 -0.8423 0.2807 -0.8969 0.2674 -0.9516 0.2539 -1.0063 0.2404 -1.0609 0.2269 -1.1156 0.2135 -1.1702 0.2003 -1.2249 0.1874 -1.2796 0.1747 -1.3342 0.1624 -1.3889 0.1505 -1.4436 0.1391 -1.4982 0.1281 -1.5529 0.1176 -1.6075 0.1077 -1.6622 0.0983 -1.7169 0.0894 -1.7715 0.0811 -1.8262 0.0734 -1.8809 0.0662 -1.9355 0.0595 -1.9902 0.0533 -2.0449 0.0476 -2.0995 0.0424 -2.1542 0.0377 -2.2088 0.0333 -2.2635 0.0294 -2.3182 0.0259 -2.3728 0.0227 +1.5239 0.0030 +1.5690 0.0036 +1.6142 0.0043 +1.6593 0.0050 +1.7044 0.0059 +1.7495 0.0069 +1.7946 0.0081 +1.8397 0.0094 +1.8849 0.0110 +1.9300 0.0127 +1.9751 0.0147 +2.0202 0.0169 +2.0653 0.0194 +2.1104 0.0222 +2.1556 0.0253 +2.2007 0.0287 +2.2458 0.0326 +2.2909 0.0368 +2.3360 0.0415 +2.3811 0.0466 +2.4263 0.0522 +2.4714 0.0583 +2.5165 0.0649 +2.5616 0.0720 +2.6067 0.0797 +2.6518 0.0879 +2.6970 0.0966 +2.7421 0.1059 +2.7872 0.1158 +2.8323 0.1261 +2.8774 0.1370 +2.9225 0.1484 +2.9676 0.1602 +3.0128 0.1724 +3.0579 0.1850 +3.1030 0.1979 +3.1481 0.2111 +3.1932 0.2244 +3.2383 0.2379 +3.2835 0.2514 +3.3286 0.2649 +3.3737 0.2782 +3.4188 0.2914 +3.4639 0.3042 +3.5090 0.3166 +3.5542 0.3285 +3.5993 0.3398 +3.6444 0.3504 +3.6895 0.3603 +3.7346 0.3693 +3.7797 0.3774 +3.8249 0.3845 +3.8700 0.3905 +3.9151 0.3954 +3.9602 0.3992 +4.0053 0.4017 +4.0504 0.4031 +4.0956 0.4032 +4.1407 0.4021 +4.1858 0.3997 +4.2309 0.3962 +4.2760 0.3915 +4.3211 0.3857 +4.3663 0.3788 +4.4114 0.3709 +4.4565 0.3620 +4.5016 0.3523 +4.5467 0.3418 +4.5918 0.3306 +4.6370 0.3188 +4.6821 0.3065 +4.7272 0.2937 +4.7723 0.2807 +4.8174 0.2674 +4.8625 0.2539 +4.9077 0.2404 +4.9528 0.2269 +4.9979 0.2135 +5.0430 0.2003 +5.0881 0.1874 +5.1332 0.1747 +5.1784 0.1624 +5.2235 0.1505 +5.2686 0.1391 +5.3137 0.1281 +5.3588 0.1176 +5.4039 0.1077 +5.4491 0.0983 +5.4942 0.0894 +5.5393 0.0811 +5.5844 0.0734 +5.6295 0.0662 +5.6746 0.0595 +5.7198 0.0533 +5.7649 0.0476 +5.8100 0.0424 +5.8551 0.0377 +5.9002 0.0333 +5.9453 0.0294 +5.9905 0.0259 +6.0356 0.0227 Neutrophil 1 250 150 2 1 2 1 5 --2.3403 0.0245 --2.2876 0.0277 --2.2349 0.0313 --2.1823 0.0353 --2.1296 0.0396 --2.0770 0.0444 --2.0243 0.0496 --1.9716 0.0552 --1.9190 0.0613 --1.8663 0.0679 --1.8136 0.0750 --1.7610 0.0825 --1.7083 0.0906 --1.6556 0.0992 --1.6030 0.1083 --1.5503 0.1180 --1.4977 0.1281 --1.4450 0.1386 --1.3923 0.1496 --1.3397 0.1611 --1.2870 0.1729 --1.2343 0.1851 --1.1817 0.1975 --1.1290 0.2102 --1.0764 0.2231 --1.0237 0.2361 --0.9710 0.2491 --0.9184 0.2621 --0.8657 0.2750 --0.8130 0.2878 --0.7604 0.3002 --0.7077 0.3124 --0.6550 0.3240 --0.6024 0.3352 --0.5497 0.3458 --0.4971 0.3557 --0.4444 0.3648 --0.3917 0.3731 --0.3391 0.3806 --0.2864 0.3870 --0.2337 0.3925 --0.1811 0.3969 --0.1284 0.4002 --0.0758 0.4025 --0.0231 0.4035 -0.0296 0.4035 -0.0822 0.4022 -0.1349 0.3999 -0.1876 0.3964 -0.2402 0.3919 -0.2929 0.3863 -0.3456 0.3797 -0.3982 0.3722 -0.4509 0.3637 -0.5035 0.3545 -0.5562 0.3445 -0.6089 0.3339 -0.6615 0.3226 -0.7142 0.3109 -0.7669 0.2987 -0.8195 0.2862 -0.8722 0.2735 -0.9248 0.2605 -0.9775 0.2475 -1.0302 0.2345 -1.0828 0.2215 -1.1355 0.2086 -1.1882 0.1960 -1.2408 0.1835 -1.2935 0.1714 -1.3462 0.1597 -1.3988 0.1483 -1.4515 0.1373 -1.5041 0.1268 -1.5568 0.1167 -1.6095 0.1072 -1.6621 0.0981 -1.7148 0.0896 -1.7675 0.0816 -1.8201 0.0741 -1.8728 0.0670 -1.9254 0.0605 -1.9781 0.0545 -2.0308 0.0489 -2.0834 0.0438 -2.1361 0.0391 -2.1888 0.0348 -2.2414 0.0308 -2.2941 0.0273 -2.3468 0.0241 -2.3994 0.0212 -2.4521 0.0186 -2.5047 0.0163 -2.5574 0.0142 -2.6101 0.0123 -2.6627 0.0107 -2.7154 0.0093 -2.7681 0.0080 -2.8207 0.0069 -2.8734 0.0059 -2.9260 0.0050 +-10.5298 0.0245 +-9.9542 0.0277 +-9.3786 0.0313 +-8.8030 0.0353 +-8.2274 0.0396 +-7.6518 0.0444 +-7.0762 0.0496 +-6.5006 0.0552 +-5.9250 0.0613 +-5.3494 0.0679 +-4.7738 0.0750 +-4.1982 0.0825 +-3.6226 0.0906 +-3.0470 0.0992 +-2.4714 0.1083 +-1.8958 0.1180 +-1.3202 0.1281 +-0.7446 0.1386 +-0.1690 0.1496 +0.4066 0.1611 +0.9821 0.1729 +1.5577 0.1851 +2.1333 0.1975 +2.7089 0.2102 +3.2845 0.2231 +3.8601 0.2361 +4.4357 0.2491 +5.0113 0.2621 +5.5869 0.2750 +6.1625 0.2878 +6.7381 0.3002 +7.3137 0.3124 +7.8893 0.3240 +8.4649 0.3352 +9.0405 0.3458 +9.6161 0.3557 +10.1917 0.3648 +10.7673 0.3731 +11.3429 0.3806 +11.9185 0.3870 +12.4940 0.3925 +13.0696 0.3969 +13.6452 0.4002 +14.2208 0.4025 +14.7964 0.4035 +15.3720 0.4035 +15.9476 0.4022 +16.5232 0.3999 +17.0988 0.3964 +17.6744 0.3919 +18.2500 0.3863 +18.8256 0.3797 +19.4012 0.3722 +19.9768 0.3637 +20.5524 0.3545 +21.1280 0.3445 +21.7036 0.3339 +22.2792 0.3226 +22.8548 0.3109 +23.4304 0.2987 +24.0060 0.2862 +24.5815 0.2735 +25.1571 0.2605 +25.7327 0.2475 +26.3083 0.2345 +26.8839 0.2215 +27.4595 0.2086 +28.0351 0.1960 +28.6107 0.1835 +29.1863 0.1714 +29.7619 0.1597 +30.3375 0.1483 +30.9131 0.1373 +31.4887 0.1268 +32.0643 0.1167 +32.6399 0.1072 +33.2155 0.0981 +33.7911 0.0896 +34.3667 0.0816 +34.9423 0.0741 +35.5179 0.0670 +36.0934 0.0605 +36.6690 0.0545 +37.2446 0.0489 +37.8202 0.0438 +38.3958 0.0391 +38.9714 0.0348 +39.5470 0.0308 +40.1226 0.0273 +40.6982 0.0241 +41.2738 0.0212 +41.8494 0.0186 +42.4250 0.0163 +43.0006 0.0142 +43.5762 0.0123 +44.1518 0.0107 +44.7274 0.0093 +45.3030 0.0080 +45.8786 0.0069 +46.4542 0.0059 +47.0298 0.0050 Weight 1 250 150 2 1 4 0 --2.7996 0.0076 --2.7425 0.0089 --2.6853 0.0105 --2.6281 0.0122 --2.5709 0.0142 --2.5137 0.0164 --2.4565 0.0190 --2.3993 0.0218 --2.3421 0.0250 --2.2850 0.0286 --2.2278 0.0326 --2.1706 0.0370 --2.1134 0.0419 --2.0562 0.0473 --1.9990 0.0531 --1.9418 0.0596 --1.8846 0.0665 --1.8275 0.0741 --1.7703 0.0822 --1.7131 0.0909 --1.6559 0.1002 --1.5987 0.1101 --1.5415 0.1206 --1.4843 0.1316 --1.4271 0.1432 --1.3700 0.1553 --1.3128 0.1678 --1.2556 0.1808 --1.1984 0.1941 --1.1412 0.2076 --1.0840 0.2215 --1.0268 0.2354 --0.9696 0.2494 --0.9125 0.2633 --0.8553 0.2772 --0.7981 0.2907 --0.7409 0.3040 --0.6837 0.3168 --0.6265 0.3290 --0.5693 0.3406 --0.5121 0.3514 --0.4550 0.3614 --0.3978 0.3704 --0.3406 0.3784 --0.2834 0.3853 --0.2262 0.3910 --0.1690 0.3955 --0.1118 0.3988 --0.0546 0.4007 -0.0025 0.4013 -0.0597 0.4006 -0.1169 0.3985 -0.1741 0.3952 -0.2313 0.3906 -0.2885 0.3847 -0.3457 0.3778 -0.4029 0.3697 -0.4600 0.3605 -0.5172 0.3505 -0.5744 0.3396 -0.6316 0.3280 -0.6888 0.3157 -0.7460 0.3028 -0.8032 0.2896 -0.8603 0.2759 -0.9175 0.2621 -0.9747 0.2481 -1.0319 0.2342 -1.0891 0.2202 -1.1463 0.2064 -1.2035 0.1929 -1.2607 0.1796 -1.3178 0.1667 -1.3750 0.1542 -1.4322 0.1422 -1.4894 0.1306 -1.5466 0.1197 -1.6038 0.1092 -1.6610 0.0994 -1.7182 0.0901 -1.7753 0.0815 -1.8325 0.0734 -1.8897 0.0659 -1.9469 0.0590 -2.0041 0.0526 -2.0613 0.0468 -2.1185 0.0414 -2.1757 0.0366 -2.2328 0.0322 -2.2900 0.0283 -2.3472 0.0247 -2.4044 0.0215 -2.4616 0.0187 -2.5188 0.0162 -2.5760 0.0140 -2.6332 0.0120 -2.6903 0.0103 -2.7475 0.0088 -2.8047 0.0075 -2.8619 0.0064 -2.9191 0.0054 +0.6306 0.0076 +0.6356 0.0089 +0.6407 0.0105 +0.6457 0.0122 +0.6507 0.0142 +0.6558 0.0164 +0.6608 0.0190 +0.6659 0.0218 +0.6709 0.0250 +0.6759 0.0286 +0.6810 0.0326 +0.6860 0.0370 +0.6910 0.0419 +0.6961 0.0473 +0.7011 0.0531 +0.7061 0.0596 +0.7112 0.0665 +0.7162 0.0741 +0.7212 0.0822 +0.7263 0.0909 +0.7313 0.1002 +0.7363 0.1101 +0.7414 0.1206 +0.7464 0.1316 +0.7514 0.1432 +0.7565 0.1553 +0.7615 0.1678 +0.7665 0.1808 +0.7716 0.1941 +0.7766 0.2076 +0.7816 0.2215 +0.7867 0.2354 +0.7917 0.2494 +0.7967 0.2633 +0.8018 0.2772 +0.8068 0.2907 +0.8119 0.3040 +0.8169 0.3168 +0.8219 0.3290 +0.8270 0.3406 +0.8320 0.3514 +0.8370 0.3614 +0.8421 0.3704 +0.8471 0.3784 +0.8521 0.3853 +0.8572 0.3910 +0.8622 0.3955 +0.8672 0.3988 +0.8723 0.4007 +0.8773 0.4013 +0.8823 0.4006 +0.8874 0.3985 +0.8924 0.3952 +0.8974 0.3906 +0.9025 0.3847 +0.9075 0.3778 +0.9125 0.3697 +0.9176 0.3605 +0.9226 0.3505 +0.9276 0.3396 +0.9327 0.3280 +0.9377 0.3157 +0.9427 0.3028 +0.9478 0.2896 +0.9528 0.2759 +0.9579 0.2621 +0.9629 0.2481 +0.9679 0.2342 +0.9730 0.2202 +0.9780 0.2064 +0.9830 0.1929 +0.9881 0.1796 +0.9931 0.1667 +0.9981 0.1542 +1.0032 0.1422 +1.0082 0.1306 +1.0132 0.1197 +1.0183 0.1092 +1.0233 0.0994 +1.0283 0.0901 +1.0334 0.0815 +1.0384 0.0734 +1.0434 0.0659 +1.0485 0.0590 +1.0535 0.0526 +1.0585 0.0468 +1.0636 0.0414 +1.0686 0.0366 +1.0736 0.0322 +1.0787 0.0283 +1.0837 0.0247 +1.0888 0.0215 +1.0938 0.0187 +1.0988 0.0162 +1.1039 0.0140 +1.1089 0.0120 +1.1139 0.0103 +1.1190 0.0088 +1.1240 0.0075 +1.1290 0.0064 +1.1341 0.0054 diff --git a/sourcecodes/data/example_chl/bWRparameters.txt b/sourcecodes/data/example_chl/bWRparameters.txt new file mode 100644 index 00000000..6d6eabf6 --- /dev/null +++ b/sourcecodes/data/example_chl/bWRparameters.txt @@ -0,0 +1,21 @@ +Ctrq3 +Discrete node with 2 states +1 0.6341 +2 0.3659 + +MAS +Continuous node +0.4796 0.3499 + +Neutrophil +Continuous node +15.0488 10.8026 + +Load +Continuous node +4.0771 0.8165 + +Weight +Continuous node +0.8771 0.0875 + diff --git a/sourcecodes/data/example_chr2_spleen/cuLmap.txt b/sourcecodes/data/example_chr2_spleen/cuLmap.txt index 325f9a8d..9ca8e641 100644 --- a/sourcecodes/data/example_chr2_spleen/cuLmap.txt +++ b/sourcecodes/data/example_chr2_spleen/cuLmap.txt @@ -1,14 +1,14 @@ -rs3664317 2 0.501140 1.452055 -Oas1a 1 0.347301 8.281466 -Parp9 1 0.216211 9.804164 -Dhx58 1 0.302026 8.891247 -Cd1d1 1 0.268738 9.643644 -Irf7 1 0.548579 10.009315 -Oas3 1 0.548788 8.957397 -Pml 1 0.190985 11.075425 -Mx1 1 0.336795 7.483137 -Ifit1 1 0.569192 8.828521 -Trim25 1 0.176657 10.255192 -Oas1g 1 0.458134 8.632151 -Pglyrp3 1 0.123345 6.070877 -Ifih1 1 0.387383 9.298137 +rs3664317 0.501140 1.452055 +Oas1a 0.347301 8.281466 +Parp9 0.216211 9.804164 +Dhx58 0.302026 8.891247 +Cd1d1 0.268738 9.643644 +Irf7 0.548579 10.009315 +Oas3 0.548788 8.957397 +Pml 0.190985 11.075425 +Mx1 0.336795 7.483137 +Ifit1 0.569192 8.828521 +Trim25 0.176657 10.255192 +Oas1g 0.458134 8.632151 +Pglyrp3 0.123345 6.070877 +Ifih1 0.387383 9.298137 diff --git a/sourcecodes/data/example_chr2_spleen/cuLnet_figure.txt b/sourcecodes/data/example_chr2_spleen/cuLnet_figure.txt index 79f052a0..db0c7cf0 100644 --- a/sourcecodes/data/example_chr2_spleen/cuLnet_figure.txt +++ b/sourcecodes/data/example_chr2_spleen/cuLnet_figure.txt @@ -24,1364 +24,1364 @@ Ifih1 1 250 150 1 1 6 3 4 6 8 10 12 --3.1997 0.0023 --3.1378 0.0028 --3.0758 0.0034 --3.0138 0.0041 --2.9518 0.0050 --2.8899 0.0060 --2.8279 0.0071 --2.7659 0.0085 --2.7039 0.0101 --2.6420 0.0119 --2.5800 0.0140 --2.5180 0.0164 --2.4560 0.0192 --2.3941 0.0223 --2.3321 0.0259 --2.2701 0.0299 --2.2081 0.0343 --2.1462 0.0393 --2.0842 0.0449 --2.0222 0.0510 --1.9602 0.0578 --1.8983 0.0652 --1.8363 0.0733 --1.7743 0.0820 --1.7124 0.0914 --1.6504 0.1015 --1.5884 0.1124 --1.5264 0.1238 --1.4645 0.1359 --1.4025 0.1487 --1.3405 0.1620 --1.2785 0.1758 --1.2166 0.1900 --1.1546 0.2046 --1.0926 0.2195 --1.0306 0.2345 --0.9687 0.2496 --0.9067 0.2647 --0.8447 0.2795 --0.7827 0.2941 --0.7208 0.3082 --0.6588 0.3218 --0.5968 0.3347 --0.5348 0.3467 --0.4729 0.3578 --0.4109 0.3678 --0.3489 0.3766 --0.2870 0.3842 --0.2250 0.3903 --0.1630 0.3951 --0.1010 0.3984 --0.0391 0.4001 -0.0229 0.4003 -0.0849 0.3990 -0.1469 0.3961 -0.2088 0.3917 -0.2708 0.3859 -0.3328 0.3787 -0.3948 0.3702 -0.4567 0.3605 -0.5187 0.3497 -0.5807 0.3379 -0.6427 0.3252 -0.7046 0.3118 -0.7666 0.2978 -0.8286 0.2834 -0.8906 0.2685 -0.9525 0.2535 -1.0145 0.2384 -1.0765 0.2234 -1.1385 0.2084 -1.2004 0.1938 -1.2624 0.1794 -1.3244 0.1655 -1.3863 0.1521 -1.4483 0.1392 -1.5103 0.1269 -1.5723 0.1153 -1.6342 0.1043 -1.6962 0.0940 -1.7582 0.0844 -1.8202 0.0755 -1.8821 0.0672 -1.9441 0.0597 -2.0061 0.0527 -2.0681 0.0464 -2.1300 0.0407 -2.1920 0.0356 -2.2540 0.0310 -2.3160 0.0269 -2.3779 0.0232 -2.4399 0.0200 -2.5019 0.0171 -2.5639 0.0146 -2.6258 0.0124 -2.6878 0.0105 -2.7498 0.0089 -2.8117 0.0075 -2.8737 0.0063 -2.9357 0.0052 -2.9977 0.0043 +8.0586 0.0023 +8.0826 0.0028 +8.1066 0.0034 +8.1306 0.0041 +8.1546 0.0050 +8.1787 0.0060 +8.2027 0.0071 +8.2267 0.0085 +8.2507 0.0101 +8.2747 0.0119 +8.2987 0.0140 +8.3227 0.0164 +8.3467 0.0192 +8.3707 0.0223 +8.3947 0.0259 +8.4187 0.0299 +8.4427 0.0343 +8.4667 0.0393 +8.4908 0.0449 +8.5148 0.0510 +8.5388 0.0578 +8.5628 0.0652 +8.5868 0.0733 +8.6108 0.0820 +8.6348 0.0914 +8.6588 0.1015 +8.6828 0.1124 +8.7068 0.1238 +8.7308 0.1359 +8.7548 0.1487 +8.7788 0.1620 +8.8029 0.1758 +8.8269 0.1900 +8.8509 0.2046 +8.8749 0.2195 +8.8989 0.2345 +8.9229 0.2496 +8.9469 0.2647 +8.9709 0.2795 +8.9949 0.2941 +9.0189 0.3082 +9.0429 0.3218 +9.0669 0.3347 +9.0909 0.3467 +9.1150 0.3578 +9.1390 0.3678 +9.1630 0.3766 +9.1870 0.3842 +9.2110 0.3903 +9.2350 0.3951 +9.2590 0.3984 +9.2830 0.4001 +9.3070 0.4003 +9.3310 0.3990 +9.3550 0.3961 +9.3790 0.3917 +9.4030 0.3859 +9.4271 0.3787 +9.4511 0.3702 +9.4751 0.3605 +9.4991 0.3497 +9.5231 0.3379 +9.5471 0.3252 +9.5711 0.3118 +9.5951 0.2978 +9.6191 0.2834 +9.6431 0.2685 +9.6671 0.2535 +9.6911 0.2384 +9.7151 0.2234 +9.7392 0.2084 +9.7632 0.1938 +9.7872 0.1794 +9.8112 0.1655 +9.8352 0.1521 +9.8592 0.1392 +9.8832 0.1269 +9.9072 0.1153 +9.9312 0.1043 +9.9552 0.0940 +9.9792 0.0844 +10.0032 0.0755 +10.0272 0.0672 +10.0513 0.0597 +10.0753 0.0527 +10.0993 0.0464 +10.1233 0.0407 +10.1473 0.0356 +10.1713 0.0310 +10.1953 0.0269 +10.2193 0.0232 +10.2433 0.0200 +10.2673 0.0171 +10.2913 0.0146 +10.3153 0.0124 +10.3393 0.0105 +10.3634 0.0089 +10.3874 0.0075 +10.4114 0.0063 +10.4354 0.0052 +10.4594 0.0043 Cd1d1 1 250 150 2 1 2 3 6 8 9 --3.4620 0.0010 --3.3962 0.0012 --3.3304 0.0015 --3.2645 0.0019 --3.1987 0.0023 --3.1328 0.0029 --3.0670 0.0035 --3.0011 0.0043 --2.9353 0.0052 --2.8694 0.0064 --2.8036 0.0077 --2.7378 0.0092 --2.6719 0.0110 --2.6061 0.0131 --2.5402 0.0156 --2.4744 0.0184 --2.4085 0.0216 --2.3427 0.0253 --2.2768 0.0295 --2.2110 0.0342 --2.1452 0.0395 --2.0793 0.0455 --2.0135 0.0521 --1.9476 0.0594 --1.8818 0.0674 --1.8159 0.0762 --1.7501 0.0857 --1.6843 0.0960 --1.6184 0.1072 --1.5526 0.1190 --1.4867 0.1316 --1.4209 0.1449 --1.3550 0.1589 --1.2892 0.1734 --1.2233 0.1885 --1.1575 0.2039 --1.0917 0.2197 --1.0258 0.2357 --0.9600 0.2517 --0.8941 0.2677 --0.8283 0.2834 --0.7624 0.2987 --0.6966 0.3135 --0.6308 0.3276 --0.5649 0.3408 --0.4991 0.3530 --0.4332 0.3641 --0.3674 0.3739 --0.3015 0.3823 --0.2357 0.3891 --0.1698 0.3944 --0.1040 0.3980 --0.0382 0.3999 -0.0277 0.4000 -0.0935 0.3984 -0.1594 0.3951 -0.2252 0.3901 -0.2911 0.3835 -0.3569 0.3753 -0.4227 0.3658 -0.4886 0.3549 -0.5544 0.3428 -0.6203 0.3297 -0.6861 0.3158 -0.7520 0.3011 -0.8178 0.2858 -0.8837 0.2702 -0.9495 0.2543 -1.0153 0.2382 -1.0812 0.2223 -1.1470 0.2064 -1.2129 0.1909 -1.2787 0.1758 -1.3446 0.1612 -1.4104 0.1471 -1.4763 0.1337 -1.5421 0.1210 -1.6079 0.1090 -1.6738 0.0978 -1.7396 0.0873 -1.8055 0.0776 -1.8713 0.0687 -1.9372 0.0606 -2.0030 0.0532 -2.0688 0.0465 -2.1347 0.0404 -2.2005 0.0350 -2.2664 0.0302 -2.3322 0.0259 -2.3981 0.0222 -2.4639 0.0189 -2.5298 0.0160 -2.5956 0.0135 -2.6614 0.0113 -2.7273 0.0095 -2.7931 0.0079 -2.8590 0.0066 -2.9248 0.0054 -2.9907 0.0044 -3.0565 0.0036 -3.1223 0.0030 +8.7133 0.0010 +8.7310 0.0012 +8.7487 0.0015 +8.7663 0.0019 +8.7840 0.0023 +8.8017 0.0029 +8.8194 0.0035 +8.8371 0.0043 +8.8548 0.0052 +8.8725 0.0064 +8.8902 0.0077 +8.9079 0.0092 +8.9256 0.0110 +8.9433 0.0131 +8.9610 0.0156 +8.9787 0.0184 +8.9964 0.0216 +9.0141 0.0253 +9.0318 0.0295 +9.0495 0.0342 +9.0672 0.0395 +9.0849 0.0455 +9.1025 0.0521 +9.1202 0.0594 +9.1379 0.0674 +9.1556 0.0762 +9.1733 0.0857 +9.1910 0.0960 +9.2087 0.1072 +9.2264 0.1190 +9.2441 0.1316 +9.2618 0.1449 +9.2795 0.1589 +9.2972 0.1734 +9.3149 0.1885 +9.3326 0.2039 +9.3503 0.2197 +9.3680 0.2357 +9.3857 0.2517 +9.4034 0.2677 +9.4211 0.2834 +9.4387 0.2987 +9.4564 0.3135 +9.4741 0.3276 +9.4918 0.3408 +9.5095 0.3530 +9.5272 0.3641 +9.5449 0.3739 +9.5626 0.3823 +9.5803 0.3891 +9.5980 0.3944 +9.6157 0.3980 +9.6334 0.3999 +9.6511 0.4000 +9.6688 0.3984 +9.6865 0.3951 +9.7042 0.3901 +9.7219 0.3835 +9.7396 0.3753 +9.7573 0.3658 +9.7749 0.3549 +9.7926 0.3428 +9.8103 0.3297 +9.8280 0.3158 +9.8457 0.3011 +9.8634 0.2858 +9.8811 0.2702 +9.8988 0.2543 +9.9165 0.2382 +9.9342 0.2223 +9.9519 0.2064 +9.9696 0.1909 +9.9873 0.1758 +10.0050 0.1612 +10.0227 0.1471 +10.0404 0.1337 +10.0581 0.1210 +10.0758 0.1090 +10.0935 0.0978 +10.1111 0.0873 +10.1288 0.0776 +10.1465 0.0687 +10.1642 0.0606 +10.1819 0.0532 +10.1996 0.0465 +10.2173 0.0404 +10.2350 0.0350 +10.2527 0.0302 +10.2704 0.0259 +10.2881 0.0222 +10.3058 0.0189 +10.3235 0.0160 +10.3412 0.0135 +10.3589 0.0113 +10.3766 0.0095 +10.3943 0.0079 +10.4120 0.0066 +10.4297 0.0054 +10.4473 0.0044 +10.4650 0.0036 +10.4827 0.0030 Dhx58 1 250 150 2 1 2 5 5 6 12 13 14 --3.2125 0.0024 --3.1470 0.0029 --3.0814 0.0035 --3.0159 0.0043 --2.9503 0.0053 --2.8848 0.0064 --2.8192 0.0076 --2.7536 0.0092 --2.6881 0.0110 --2.6225 0.0130 --2.5570 0.0154 --2.4914 0.0182 --2.4258 0.0213 --2.3603 0.0249 --2.2947 0.0290 --2.2292 0.0336 --2.1636 0.0388 --2.0980 0.0446 --2.0325 0.0510 --1.9669 0.0581 --1.9014 0.0659 --1.8358 0.0745 --1.7702 0.0838 --1.7047 0.0938 --1.6391 0.1046 --1.5736 0.1162 --1.5080 0.1284 --1.4425 0.1414 --1.3769 0.1550 --1.3113 0.1692 --1.2458 0.1839 --1.1802 0.1990 --1.1147 0.2145 --1.0491 0.2302 --0.9835 0.2459 --0.9180 0.2617 --0.8524 0.2772 --0.7869 0.2924 --0.7213 0.3071 --0.6557 0.3212 --0.5902 0.3346 --0.5246 0.3469 --0.4591 0.3582 --0.3935 0.3683 --0.3280 0.3771 --0.2624 0.3844 --0.1968 0.3902 --0.1313 0.3944 --0.0657 0.3970 --0.0002 0.3978 -0.0654 0.3970 -0.1310 0.3944 -0.1965 0.3902 -0.2621 0.3845 -0.3276 0.3771 -0.3932 0.3684 -0.4588 0.3583 -0.5243 0.3470 -0.5899 0.3346 -0.6554 0.3213 -0.7210 0.3072 -0.7866 0.2925 -0.8521 0.2773 -0.9177 0.2617 -0.9832 0.2460 -1.0488 0.2302 -1.1143 0.2146 -1.1799 0.1991 -1.2455 0.1840 -1.3110 0.1693 -1.3766 0.1551 -1.4421 0.1415 -1.5077 0.1285 -1.5733 0.1162 -1.6388 0.1047 -1.7044 0.0939 -1.7699 0.0838 -1.8355 0.0745 -1.9011 0.0660 -1.9666 0.0582 -2.0322 0.0510 -2.0977 0.0446 -2.1633 0.0388 -2.2288 0.0337 -2.2944 0.0290 -2.3600 0.0250 -2.4255 0.0213 -2.4911 0.0182 -2.5566 0.0154 -2.6222 0.0130 -2.6878 0.0110 -2.7533 0.0092 -2.8189 0.0077 -2.8844 0.0064 -2.9500 0.0053 -3.0156 0.0043 -3.0811 0.0035 -3.1467 0.0029 -3.2122 0.0024 -3.2778 0.0019 -3.3434 0.0015 +7.9210 0.0024 +7.9408 0.0029 +7.9606 0.0035 +7.9804 0.0043 +8.0002 0.0053 +8.0200 0.0064 +8.0398 0.0076 +8.0596 0.0092 +8.0794 0.0110 +8.0992 0.0130 +8.1190 0.0154 +8.1388 0.0182 +8.1586 0.0213 +8.1784 0.0249 +8.1982 0.0290 +8.2180 0.0336 +8.2378 0.0388 +8.2576 0.0446 +8.2774 0.0510 +8.2972 0.0581 +8.3170 0.0659 +8.3368 0.0745 +8.3566 0.0838 +8.3764 0.0938 +8.3962 0.1046 +8.4160 0.1162 +8.4358 0.1284 +8.4556 0.1414 +8.4754 0.1550 +8.4952 0.1692 +8.5150 0.1839 +8.5348 0.1990 +8.5546 0.2145 +8.5744 0.2302 +8.5942 0.2459 +8.6140 0.2617 +8.6338 0.2772 +8.6536 0.2924 +8.6734 0.3071 +8.6932 0.3212 +8.7130 0.3346 +8.7328 0.3469 +8.7526 0.3582 +8.7724 0.3683 +8.7922 0.3771 +8.8120 0.3844 +8.8318 0.3902 +8.8516 0.3944 +8.8714 0.3970 +8.8912 0.3978 +8.9110 0.3970 +8.9308 0.3944 +8.9506 0.3902 +8.9704 0.3845 +8.9902 0.3771 +9.0100 0.3684 +9.0298 0.3583 +9.0496 0.3470 +9.0694 0.3346 +9.0892 0.3213 +9.1090 0.3072 +9.1288 0.2925 +9.1486 0.2773 +9.1684 0.2617 +9.1882 0.2460 +9.2080 0.2302 +9.2278 0.2146 +9.2476 0.1991 +9.2674 0.1840 +9.2872 0.1693 +9.3070 0.1551 +9.3268 0.1415 +9.3466 0.1285 +9.3664 0.1162 +9.3862 0.1047 +9.4060 0.0939 +9.4258 0.0838 +9.4456 0.0745 +9.4654 0.0660 +9.4852 0.0582 +9.5050 0.0510 +9.5248 0.0446 +9.5446 0.0388 +9.5644 0.0337 +9.5842 0.0290 +9.6040 0.0250 +9.6238 0.0213 +9.6436 0.0182 +9.6634 0.0154 +9.6832 0.0130 +9.7030 0.0110 +9.7228 0.0092 +9.7426 0.0077 +9.7624 0.0064 +9.7822 0.0053 +9.8020 0.0043 +9.8218 0.0035 +9.8416 0.0029 +9.8614 0.0024 +9.8812 0.0019 +9.9010 0.0015 Oas1g 1 250 150 2 1 4 0 --3.5192 0.0009 --3.4507 0.0011 --3.3821 0.0014 --3.3135 0.0018 --3.2449 0.0022 --3.1763 0.0028 --3.1077 0.0034 --3.0391 0.0042 --2.9705 0.0052 --2.9019 0.0063 --2.8334 0.0076 --2.7648 0.0092 --2.6962 0.0111 --2.6276 0.0133 --2.5590 0.0158 --2.4904 0.0187 --2.4218 0.0221 --2.3532 0.0260 --2.2847 0.0304 --2.2161 0.0353 --2.1475 0.0409 --2.0789 0.0472 --2.0103 0.0542 --1.9417 0.0619 --1.8731 0.0704 --1.8045 0.0797 --1.7359 0.0899 --1.6674 0.1008 --1.5988 0.1125 --1.5302 0.1251 --1.4616 0.1383 --1.3930 0.1523 --1.3244 0.1670 --1.2558 0.1822 --1.1872 0.1978 --1.1186 0.2138 --1.0501 0.2300 --0.9815 0.2464 --0.9129 0.2626 --0.8443 0.2787 --0.7757 0.2943 --0.7071 0.3094 --0.6385 0.3238 --0.5699 0.3373 --0.5014 0.3497 --0.4328 0.3609 --0.3642 0.3707 --0.2956 0.3791 --0.2270 0.3858 --0.1584 0.3909 --0.0898 0.3942 --0.0212 0.3956 -0.0474 0.3953 -0.1159 0.3931 -0.1845 0.3891 -0.2531 0.3834 -0.3217 0.3761 -0.3903 0.3672 -0.4589 0.3568 -0.5275 0.3451 -0.5961 0.3323 -0.6646 0.3184 -0.7332 0.3038 -0.8018 0.2884 -0.8704 0.2726 -0.9390 0.2565 -1.0076 0.2401 -1.0762 0.2238 -1.1448 0.2077 -1.2134 0.1918 -1.2819 0.1763 -1.3505 0.1613 -1.4191 0.1469 -1.4877 0.1332 -1.5563 0.1202 -1.6249 0.1080 -1.6935 0.0965 -1.7621 0.0859 -1.8307 0.0761 -1.8992 0.0671 -1.9678 0.0589 -2.0364 0.0514 -2.1050 0.0447 -2.1736 0.0387 -2.2422 0.0334 -2.3108 0.0286 -2.3794 0.0244 -2.4479 0.0208 -2.5165 0.0176 -2.5851 0.0148 -2.6537 0.0124 -2.7223 0.0103 -2.7909 0.0086 -2.8595 0.0071 -2.9281 0.0058 -2.9967 0.0048 -3.0652 0.0039 -3.1338 0.0032 -3.2024 0.0025 -3.2710 0.0020 -3.3396 0.0016 +7.0199 0.0009 +7.0513 0.0011 +7.0827 0.0014 +7.1141 0.0018 +7.1456 0.0022 +7.1770 0.0028 +7.2084 0.0034 +7.2398 0.0042 +7.2712 0.0052 +7.3027 0.0063 +7.3341 0.0076 +7.3655 0.0092 +7.3969 0.0111 +7.4284 0.0133 +7.4598 0.0158 +7.4912 0.0187 +7.5226 0.0221 +7.5541 0.0260 +7.5855 0.0304 +7.6169 0.0353 +7.6483 0.0409 +7.6797 0.0472 +7.7112 0.0542 +7.7426 0.0619 +7.7740 0.0704 +7.8054 0.0797 +7.8369 0.0899 +7.8683 0.1008 +7.8997 0.1125 +7.9311 0.1251 +7.9625 0.1383 +7.9940 0.1523 +8.0254 0.1670 +8.0568 0.1822 +8.0882 0.1978 +8.1197 0.2138 +8.1511 0.2300 +8.1825 0.2464 +8.2139 0.2626 +8.2454 0.2787 +8.2768 0.2943 +8.3082 0.3094 +8.3396 0.3238 +8.3710 0.3373 +8.4025 0.3497 +8.4339 0.3609 +8.4653 0.3707 +8.4967 0.3791 +8.5282 0.3858 +8.5596 0.3909 +8.5910 0.3942 +8.6224 0.3956 +8.6538 0.3953 +8.6853 0.3931 +8.7167 0.3891 +8.7481 0.3834 +8.7795 0.3761 +8.8110 0.3672 +8.8424 0.3568 +8.8738 0.3451 +8.9052 0.3323 +8.9366 0.3184 +8.9681 0.3038 +8.9995 0.2884 +9.0309 0.2726 +9.0623 0.2565 +9.0938 0.2401 +9.1252 0.2238 +9.1566 0.2077 +9.1880 0.1918 +9.2195 0.1763 +9.2509 0.1613 +9.2823 0.1469 +9.3137 0.1332 +9.3451 0.1202 +9.3766 0.1080 +9.4080 0.0965 +9.4394 0.0859 +9.4708 0.0761 +9.5023 0.0671 +9.5337 0.0589 +9.5651 0.0514 +9.5965 0.0447 +9.6279 0.0387 +9.6594 0.0334 +9.6908 0.0286 +9.7222 0.0244 +9.7536 0.0208 +9.7851 0.0176 +9.8165 0.0148 +9.8479 0.0124 +9.8793 0.0103 +9.9108 0.0086 +9.9422 0.0071 +9.9736 0.0058 +10.0050 0.0048 +10.0364 0.0039 +10.0679 0.0032 +10.0993 0.0025 +10.1307 0.0020 +10.1621 0.0016 Trim25 1 250 150 3 2 3 4 3 7 9 10 --3.4748 0.0009 --3.4127 0.0012 --3.3506 0.0014 --3.2885 0.0018 --3.2263 0.0022 --3.1642 0.0026 --3.1021 0.0032 --3.0400 0.0039 --2.9779 0.0047 --2.9158 0.0056 --2.8536 0.0068 --2.7915 0.0081 --2.7294 0.0096 --2.6673 0.0113 --2.6052 0.0133 --2.5431 0.0156 --2.4810 0.0183 --2.4188 0.0213 --2.3567 0.0247 --2.2946 0.0286 --2.2325 0.0329 --2.1704 0.0377 --2.1083 0.0431 --2.0461 0.0490 --1.9840 0.0556 --1.9219 0.0628 --1.8598 0.0706 --1.7977 0.0791 --1.7356 0.0883 --1.6735 0.0982 --1.6113 0.1087 --1.5492 0.1200 --1.4871 0.1319 --1.4250 0.1444 --1.3629 0.1575 --1.3008 0.1711 --1.2386 0.1851 --1.1765 0.1996 --1.1144 0.2144 --1.0523 0.2293 --0.9902 0.2444 --0.9281 0.2594 --0.8660 0.2743 --0.8038 0.2889 --0.7417 0.3031 --0.6796 0.3168 --0.6175 0.3299 --0.5554 0.3422 --0.4933 0.3535 --0.4311 0.3638 --0.3690 0.3730 --0.3069 0.3809 --0.2448 0.3875 --0.1827 0.3927 --0.1206 0.3964 --0.0585 0.3987 -0.0037 0.3993 -0.0658 0.3985 -0.1279 0.3961 -0.1900 0.3922 -0.2521 0.3868 -0.3142 0.3801 -0.3764 0.3720 -0.4385 0.3627 -0.5006 0.3522 -0.5627 0.3408 -0.6248 0.3284 -0.6869 0.3153 -0.7490 0.3015 -0.8112 0.2872 -0.8733 0.2725 -0.9354 0.2576 -0.9975 0.2426 -1.0596 0.2275 -1.1217 0.2126 -1.1839 0.1979 -1.2460 0.1835 -1.3081 0.1695 -1.3702 0.1559 -1.4323 0.1429 -1.4944 0.1304 -1.5565 0.1186 -1.6187 0.1075 -1.6808 0.0970 -1.7429 0.0872 -1.8050 0.0781 -1.8671 0.0696 -1.9292 0.0619 -1.9914 0.0548 -2.0535 0.0483 -2.1156 0.0424 -2.1777 0.0371 -2.2398 0.0323 -2.3019 0.0281 -2.3640 0.0243 -2.4262 0.0209 -2.4883 0.0180 -2.5504 0.0153 -2.6125 0.0131 -2.6746 0.0111 -2.7367 0.0094 +9.6413 0.0009 +9.6523 0.0012 +9.6633 0.0014 +9.6743 0.0018 +9.6852 0.0022 +9.6962 0.0026 +9.7072 0.0032 +9.7182 0.0039 +9.7291 0.0047 +9.7401 0.0056 +9.7511 0.0068 +9.7620 0.0081 +9.7730 0.0096 +9.7840 0.0113 +9.7950 0.0133 +9.8059 0.0156 +9.8169 0.0183 +9.8279 0.0213 +9.8389 0.0247 +9.8498 0.0286 +9.8608 0.0329 +9.8718 0.0377 +9.8828 0.0431 +9.8937 0.0490 +9.9047 0.0556 +9.9157 0.0628 +9.9266 0.0706 +9.9376 0.0791 +9.9486 0.0883 +9.9596 0.0982 +9.9705 0.1087 +9.9815 0.1200 +9.9925 0.1319 +10.0035 0.1444 +10.0144 0.1575 +10.0254 0.1711 +10.0364 0.1851 +10.0473 0.1996 +10.0583 0.2144 +10.0693 0.2293 +10.0803 0.2444 +10.0912 0.2594 +10.1022 0.2743 +10.1132 0.2889 +10.1242 0.3031 +10.1351 0.3168 +10.1461 0.3299 +10.1571 0.3422 +10.1681 0.3535 +10.1790 0.3638 +10.1900 0.3730 +10.2010 0.3809 +10.2119 0.3875 +10.2229 0.3927 +10.2339 0.3964 +10.2449 0.3987 +10.2558 0.3993 +10.2668 0.3985 +10.2778 0.3961 +10.2888 0.3922 +10.2997 0.3868 +10.3107 0.3801 +10.3217 0.3720 +10.3327 0.3627 +10.3436 0.3522 +10.3546 0.3408 +10.3656 0.3284 +10.3765 0.3153 +10.3875 0.3015 +10.3985 0.2872 +10.4095 0.2725 +10.4204 0.2576 +10.4314 0.2426 +10.4424 0.2275 +10.4534 0.2126 +10.4643 0.1979 +10.4753 0.1835 +10.4863 0.1695 +10.4972 0.1559 +10.5082 0.1429 +10.5192 0.1304 +10.5302 0.1186 +10.5411 0.1075 +10.5521 0.0970 +10.5631 0.0872 +10.5741 0.0781 +10.5850 0.0696 +10.5960 0.0619 +10.6070 0.0548 +10.6180 0.0483 +10.6289 0.0424 +10.6399 0.0371 +10.6509 0.0323 +10.6618 0.0281 +10.6728 0.0243 +10.6838 0.0209 +10.6948 0.0180 +10.7057 0.0153 +10.7167 0.0131 +10.7277 0.0111 +10.7387 0.0094 Pml 1 250 150 1 6 2 8 9 --4.0862 0.0001 --4.0165 0.0001 --3.9468 0.0002 --3.8770 0.0002 --3.8073 0.0003 --3.7375 0.0004 --3.6678 0.0005 --3.5980 0.0006 --3.5283 0.0008 --3.4586 0.0010 --3.3888 0.0013 --3.3191 0.0016 --3.2493 0.0020 --3.1796 0.0026 --3.1098 0.0032 --3.0401 0.0040 --2.9704 0.0049 --2.9006 0.0060 --2.8309 0.0073 --2.7611 0.0089 --2.6914 0.0107 --2.6217 0.0129 --2.5519 0.0154 --2.4822 0.0184 --2.4124 0.0218 --2.3427 0.0257 --2.2729 0.0302 --2.2032 0.0353 --2.1335 0.0411 --2.0637 0.0476 --1.9940 0.0548 --1.9242 0.0628 --1.8545 0.0716 --1.7847 0.0813 --1.7150 0.0918 --1.6453 0.1032 --1.5755 0.1155 --1.5058 0.1285 --1.4360 0.1424 --1.3663 0.1570 --1.2966 0.1722 --1.2268 0.1880 --1.1571 0.2043 --1.0873 0.2209 --1.0176 0.2377 --0.9478 0.2546 --0.8781 0.2713 --0.8084 0.2877 --0.7386 0.3036 --0.6689 0.3188 --0.5991 0.3332 --0.5294 0.3466 --0.4596 0.3587 --0.3899 0.3695 --0.3202 0.3787 --0.2504 0.3863 --0.1807 0.3922 --0.1109 0.3962 --0.0412 0.3983 -0.0286 0.3985 -0.0983 0.3967 -0.1680 0.3930 -0.2378 0.3875 -0.3075 0.3802 -0.3773 0.3713 -0.4470 0.3608 -0.5167 0.3489 -0.5865 0.3357 -0.6562 0.3215 -0.7260 0.3064 -0.7957 0.2906 -0.8655 0.2743 -0.9352 0.2576 -1.0049 0.2408 -1.0747 0.2240 -1.1444 0.2073 -1.2142 0.1910 -1.2839 0.1751 -1.3537 0.1597 -1.4234 0.1450 -1.4931 0.1310 -1.5629 0.1178 -1.6326 0.1054 -1.7024 0.0938 -1.7721 0.0831 -1.8418 0.0733 -1.9116 0.0643 -1.9813 0.0562 -2.0511 0.0488 -2.1208 0.0422 -2.1906 0.0363 -2.2603 0.0311 -2.3300 0.0265 -2.3998 0.0225 -2.4695 0.0190 -2.5393 0.0159 -2.6090 0.0133 -2.6788 0.0111 -2.7485 0.0092 -2.8182 0.0076 -2.8880 0.0062 +10.2950 0.0001 +10.3083 0.0001 +10.3217 0.0002 +10.3350 0.0002 +10.3483 0.0003 +10.3616 0.0004 +10.3749 0.0005 +10.3883 0.0006 +10.4016 0.0008 +10.4149 0.0010 +10.4282 0.0013 +10.4415 0.0016 +10.4549 0.0020 +10.4682 0.0026 +10.4815 0.0032 +10.4948 0.0040 +10.5081 0.0049 +10.5214 0.0060 +10.5348 0.0073 +10.5481 0.0089 +10.5614 0.0107 +10.5747 0.0129 +10.5880 0.0154 +10.6014 0.0184 +10.6147 0.0218 +10.6280 0.0257 +10.6413 0.0302 +10.6546 0.0353 +10.6680 0.0411 +10.6813 0.0476 +10.6946 0.0548 +10.7079 0.0628 +10.7212 0.0716 +10.7346 0.0813 +10.7479 0.0918 +10.7612 0.1032 +10.7745 0.1155 +10.7878 0.1285 +10.8012 0.1424 +10.8145 0.1570 +10.8278 0.1722 +10.8411 0.1880 +10.8544 0.2043 +10.8678 0.2209 +10.8811 0.2377 +10.8944 0.2546 +10.9077 0.2713 +10.9210 0.2877 +10.9344 0.3036 +10.9477 0.3188 +10.9610 0.3332 +10.9743 0.3466 +10.9876 0.3587 +11.0010 0.3695 +11.0143 0.3787 +11.0276 0.3863 +11.0409 0.3922 +11.0542 0.3962 +11.0676 0.3983 +11.0809 0.3985 +11.0942 0.3967 +11.1075 0.3930 +11.1208 0.3875 +11.1342 0.3802 +11.1475 0.3713 +11.1608 0.3608 +11.1741 0.3489 +11.1874 0.3357 +11.2008 0.3215 +11.2141 0.3064 +11.2274 0.2906 +11.2407 0.2743 +11.2540 0.2576 +11.2674 0.2408 +11.2807 0.2240 +11.2940 0.2073 +11.3073 0.1910 +11.3206 0.1751 +11.3340 0.1597 +11.3473 0.1450 +11.3606 0.1310 +11.3739 0.1178 +11.3872 0.1054 +11.4006 0.0938 +11.4139 0.0831 +11.4272 0.0733 +11.4405 0.0643 +11.4538 0.0562 +11.4671 0.0488 +11.4805 0.0422 +11.4938 0.0363 +11.5071 0.0311 +11.5204 0.0265 +11.5337 0.0225 +11.5471 0.0190 +11.5604 0.0159 +11.5737 0.0133 +11.5870 0.0111 +11.6003 0.0092 +11.6137 0.0076 +11.6270 0.0062 Oas3 1 250 150 3 2 3 7 1 9 --3.0744 0.0017 --3.0125 0.0021 --2.9506 0.0026 --2.8888 0.0032 --2.8269 0.0039 --2.7650 0.0048 --2.7031 0.0059 --2.6413 0.0072 --2.5794 0.0087 --2.5175 0.0104 --2.4556 0.0125 --2.3938 0.0149 --2.3319 0.0177 --2.2700 0.0209 --2.2081 0.0246 --2.1463 0.0289 --2.0844 0.0337 --2.0225 0.0391 --1.9606 0.0452 --1.8988 0.0520 --1.8369 0.0595 --1.7750 0.0679 --1.7132 0.0771 --1.6513 0.0871 --1.5894 0.0980 --1.5275 0.1098 --1.4657 0.1224 --1.4038 0.1358 --1.3419 0.1501 --1.2800 0.1651 --1.2182 0.1808 --1.1563 0.1971 --1.0944 0.2139 --1.0325 0.2311 --0.9707 0.2486 --0.9088 0.2662 --0.8469 0.2837 --0.7850 0.3011 --0.7232 0.3181 --0.6613 0.3345 --0.5994 0.3502 --0.5375 0.3650 --0.4757 0.3787 --0.4138 0.3911 --0.3519 0.4021 --0.2901 0.4116 --0.2282 0.4195 --0.1663 0.4255 --0.1044 0.4297 --0.0426 0.4320 -0.0193 0.4324 -0.0812 0.4308 -0.1431 0.4273 -0.2049 0.4220 -0.2668 0.4148 -0.3287 0.4059 -0.3906 0.3954 -0.4524 0.3835 -0.5143 0.3702 -0.5762 0.3558 -0.6381 0.3405 -0.6999 0.3243 -0.7618 0.3075 -0.8237 0.2903 -0.8856 0.2728 -0.9474 0.2552 -1.0093 0.2377 -1.0712 0.2204 -1.1331 0.2034 -1.1949 0.1869 -1.2568 0.1709 -1.3187 0.1557 -1.3805 0.1411 -1.4424 0.1273 -1.5043 0.1144 -1.5662 0.1023 -1.6280 0.0911 -1.6899 0.0807 -1.7518 0.0712 -1.8137 0.0626 -1.8755 0.0547 -1.9374 0.0476 -1.9993 0.0413 -2.0612 0.0356 -2.1230 0.0306 -2.1849 0.0262 -2.2468 0.0223 -2.3087 0.0189 -2.3705 0.0159 -2.4324 0.0134 -2.4943 0.0112 -2.5562 0.0093 -2.6180 0.0077 -2.6799 0.0064 -2.7418 0.0052 -2.8037 0.0043 -2.8655 0.0035 -2.9274 0.0028 -2.9893 0.0023 -3.0511 0.0018 -3.1130 0.0015 +7.2702 0.0017 +7.3042 0.0021 +7.3381 0.0026 +7.3721 0.0032 +7.4060 0.0039 +7.4400 0.0048 +7.4739 0.0059 +7.5079 0.0072 +7.5419 0.0087 +7.5758 0.0104 +7.6098 0.0125 +7.6437 0.0149 +7.6777 0.0177 +7.7116 0.0209 +7.7456 0.0246 +7.7795 0.0289 +7.8135 0.0337 +7.8475 0.0391 +7.8814 0.0452 +7.9154 0.0520 +7.9493 0.0595 +7.9833 0.0679 +8.0172 0.0771 +8.0512 0.0871 +8.0852 0.0980 +8.1191 0.1098 +8.1531 0.1224 +8.1870 0.1358 +8.2210 0.1501 +8.2549 0.1651 +8.2889 0.1808 +8.3228 0.1971 +8.3568 0.2139 +8.3908 0.2311 +8.4247 0.2486 +8.4587 0.2662 +8.4926 0.2837 +8.5266 0.3011 +8.5605 0.3181 +8.5945 0.3345 +8.6284 0.3502 +8.6624 0.3650 +8.6964 0.3787 +8.7303 0.3911 +8.7643 0.4021 +8.7982 0.4116 +8.8322 0.4195 +8.8661 0.4255 +8.9001 0.4297 +8.9340 0.4320 +8.9680 0.4324 +9.0020 0.4308 +9.0359 0.4273 +9.0699 0.4220 +9.1038 0.4148 +9.1378 0.4059 +9.1717 0.3954 +9.2057 0.3835 +9.2396 0.3702 +9.2736 0.3558 +9.3076 0.3405 +9.3415 0.3243 +9.3755 0.3075 +9.4094 0.2903 +9.4434 0.2728 +9.4773 0.2552 +9.5113 0.2377 +9.5452 0.2204 +9.5792 0.2034 +9.6132 0.1869 +9.6471 0.1709 +9.6811 0.1557 +9.7150 0.1411 +9.7490 0.1273 +9.7829 0.1144 +9.8169 0.1023 +9.8508 0.0911 +9.8848 0.0807 +9.9188 0.0712 +9.9527 0.0626 +9.9867 0.0547 +10.0206 0.0476 +10.0546 0.0413 +10.0885 0.0356 +10.1225 0.0306 +10.1565 0.0262 +10.1904 0.0223 +10.2244 0.0189 +10.2583 0.0159 +10.2923 0.0134 +10.3262 0.0112 +10.3602 0.0093 +10.3941 0.0077 +10.4281 0.0064 +10.4621 0.0052 +10.4960 0.0043 +10.5300 0.0035 +10.5639 0.0028 +10.5979 0.0023 +10.6318 0.0018 +10.6658 0.0015 Pglyrp3 1 250 150 4 3 6 7 8 0 --3.5690 0.0011 --3.5005 0.0014 --3.4321 0.0017 --3.3636 0.0021 --3.2951 0.0026 --3.2266 0.0032 --3.1581 0.0039 --3.0897 0.0047 --3.0212 0.0057 --2.9527 0.0069 --2.8842 0.0083 --2.8157 0.0100 --2.7472 0.0119 --2.6788 0.0141 --2.6103 0.0166 --2.5418 0.0196 --2.4733 0.0229 --2.4048 0.0267 --2.3364 0.0310 --2.2679 0.0359 --2.1994 0.0413 --2.1309 0.0474 --2.0624 0.0541 --1.9939 0.0614 --1.9255 0.0695 --1.8570 0.0783 --1.7885 0.0878 --1.7200 0.0981 --1.6515 0.1091 --1.5831 0.1208 --1.5146 0.1332 --1.4461 0.1462 --1.3776 0.1598 --1.3091 0.1739 --1.2406 0.1885 --1.1722 0.2034 --1.1037 0.2185 --1.0352 0.2337 --0.9667 0.2490 --0.8982 0.2640 --0.8298 0.2788 --0.7613 0.2931 --0.6928 0.3069 --0.6243 0.3199 --0.5558 0.3320 --0.4873 0.3431 --0.4189 0.3530 --0.3504 0.3617 --0.2819 0.3690 --0.2134 0.3748 --0.1449 0.3790 --0.0765 0.3817 --0.0080 0.3827 -0.0605 0.3821 -0.1290 0.3798 -0.1975 0.3759 -0.2660 0.3705 -0.3344 0.3635 -0.4029 0.3552 -0.4714 0.3455 -0.5399 0.3347 -0.6084 0.3228 -0.6769 0.3100 -0.7453 0.2964 -0.8138 0.2822 -0.8823 0.2675 -0.9508 0.2525 -1.0193 0.2373 -1.0877 0.2220 -1.1562 0.2069 -1.2247 0.1919 -1.2932 0.1773 -1.3617 0.1631 -1.4302 0.1493 -1.4986 0.1362 -1.5671 0.1236 -1.6356 0.1118 -1.7041 0.1006 -1.7726 0.0902 -1.8410 0.0804 -1.9095 0.0715 -1.9780 0.0632 -2.0465 0.0557 -2.1150 0.0489 -2.1835 0.0427 -2.2519 0.0371 -2.3204 0.0321 -2.3889 0.0277 -2.4574 0.0238 -2.5259 0.0203 -2.5943 0.0173 -2.6628 0.0147 -2.7313 0.0124 -2.7998 0.0104 -2.8683 0.0087 -2.9368 0.0072 -3.0052 0.0060 -3.0737 0.0050 -3.1422 0.0041 -3.2107 0.0033 -3.2792 0.0027 +5.6307 0.0011 +5.6391 0.0014 +5.6475 0.0017 +5.6560 0.0021 +5.6644 0.0026 +5.6729 0.0032 +5.6813 0.0039 +5.6898 0.0047 +5.6982 0.0057 +5.7067 0.0069 +5.7151 0.0083 +5.7236 0.0100 +5.7320 0.0119 +5.7405 0.0141 +5.7489 0.0166 +5.7574 0.0196 +5.7658 0.0229 +5.7743 0.0267 +5.7827 0.0310 +5.7911 0.0359 +5.7996 0.0413 +5.8080 0.0474 +5.8165 0.0541 +5.8249 0.0614 +5.8334 0.0695 +5.8418 0.0783 +5.8503 0.0878 +5.8587 0.0981 +5.8672 0.1091 +5.8756 0.1208 +5.8841 0.1332 +5.8925 0.1462 +5.9010 0.1598 +5.9094 0.1739 +5.9178 0.1885 +5.9263 0.2034 +5.9347 0.2185 +5.9432 0.2337 +5.9516 0.2490 +5.9601 0.2640 +5.9685 0.2788 +5.9770 0.2931 +5.9854 0.3069 +5.9939 0.3199 +6.0023 0.3320 +6.0108 0.3431 +6.0192 0.3530 +6.0277 0.3617 +6.0361 0.3690 +6.0446 0.3748 +6.0530 0.3790 +6.0614 0.3817 +6.0699 0.3827 +6.0783 0.3821 +6.0868 0.3798 +6.0952 0.3759 +6.1037 0.3705 +6.1121 0.3635 +6.1206 0.3552 +6.1290 0.3455 +6.1375 0.3347 +6.1459 0.3228 +6.1544 0.3100 +6.1628 0.2964 +6.1713 0.2822 +6.1797 0.2675 +6.1882 0.2525 +6.1966 0.2373 +6.2050 0.2220 +6.2135 0.2069 +6.2219 0.1919 +6.2304 0.1773 +6.2388 0.1631 +6.2473 0.1493 +6.2557 0.1362 +6.2642 0.1236 +6.2726 0.1118 +6.2811 0.1006 +6.2895 0.0902 +6.2980 0.0804 +6.3064 0.0715 +6.3149 0.0632 +6.3233 0.0557 +6.3317 0.0489 +6.3402 0.0427 +6.3486 0.0371 +6.3571 0.0321 +6.3655 0.0277 +6.3740 0.0238 +6.3824 0.0203 +6.3909 0.0173 +6.3993 0.0147 +6.4078 0.0124 +6.4162 0.0104 +6.4247 0.0087 +6.4331 0.0072 +6.4416 0.0060 +6.4500 0.0050 +6.4585 0.0041 +6.4669 0.0033 +6.4753 0.0027 Parp9 1 250 150 2 2 6 1 11 --2.7999 0.0080 --2.7399 0.0094 --2.6799 0.0111 --2.6199 0.0130 --2.5599 0.0152 --2.4999 0.0177 --2.4399 0.0205 --2.3799 0.0237 --2.3199 0.0272 --2.2599 0.0312 --2.1999 0.0357 --2.1398 0.0406 --2.0798 0.0461 --2.0198 0.0521 --1.9598 0.0587 --1.8998 0.0659 --1.8398 0.0737 --1.7798 0.0821 --1.7198 0.0912 --1.6598 0.1009 --1.5998 0.1112 --1.5398 0.1222 --1.4798 0.1337 --1.4198 0.1458 --1.3598 0.1585 --1.2997 0.1716 --1.2397 0.1851 --1.1797 0.1990 --1.1197 0.2132 --1.0597 0.2276 --0.9997 0.2420 --0.9397 0.2565 --0.8797 0.2709 --0.8197 0.2850 --0.7597 0.2988 --0.6997 0.3121 --0.6397 0.3249 --0.5797 0.3369 --0.5197 0.3482 --0.4596 0.3586 --0.3996 0.3679 --0.3396 0.3761 --0.2796 0.3832 --0.2196 0.3889 --0.1596 0.3934 --0.0996 0.3964 --0.0396 0.3981 -0.0204 0.3983 -0.0804 0.3971 -0.1404 0.3945 -0.2004 0.3905 -0.2604 0.3851 -0.3204 0.3785 -0.3805 0.3706 -0.4405 0.3617 -0.5005 0.3516 -0.5605 0.3406 -0.6205 0.3288 -0.6805 0.3163 -0.7405 0.3031 -0.8005 0.2894 -0.8605 0.2754 -0.9205 0.2611 -0.9805 0.2467 -1.0405 0.2322 -1.1005 0.2178 -1.1605 0.2035 -1.2206 0.1895 -1.2806 0.1759 -1.3406 0.1626 -1.4006 0.1498 -1.4606 0.1375 -1.5206 0.1258 -1.5806 0.1146 -1.6406 0.1041 -1.7006 0.0942 -1.7606 0.0849 -1.8206 0.0763 -1.8806 0.0683 -1.9406 0.0609 -2.0006 0.0541 -2.0607 0.0480 -2.1207 0.0423 -2.1807 0.0372 -2.2407 0.0326 -2.3007 0.0285 -2.3607 0.0247 -2.4207 0.0214 -2.4807 0.0185 -2.5407 0.0159 -2.6007 0.0137 -2.6607 0.0117 -2.7207 0.0099 -2.7807 0.0084 -2.8407 0.0071 -2.9008 0.0060 -2.9608 0.0050 -3.0208 0.0042 -3.0808 0.0035 -3.1408 0.0029 -3.2008 0.0024 +9.1988 0.0080 +9.2118 0.0094 +9.2247 0.0111 +9.2377 0.0130 +9.2507 0.0152 +9.2637 0.0177 +9.2766 0.0205 +9.2896 0.0237 +9.3026 0.0272 +9.3156 0.0312 +9.3285 0.0357 +9.3415 0.0406 +9.3545 0.0461 +9.3675 0.0521 +9.3804 0.0587 +9.3934 0.0659 +9.4064 0.0737 +9.4194 0.0821 +9.4323 0.0912 +9.4453 0.1009 +9.4583 0.1112 +9.4712 0.1222 +9.4842 0.1337 +9.4972 0.1458 +9.5102 0.1585 +9.5231 0.1716 +9.5361 0.1851 +9.5491 0.1990 +9.5621 0.2132 +9.5750 0.2276 +9.5880 0.2420 +9.6010 0.2565 +9.6140 0.2709 +9.6269 0.2850 +9.6399 0.2988 +9.6529 0.3121 +9.6659 0.3249 +9.6788 0.3369 +9.6918 0.3482 +9.7048 0.3586 +9.7178 0.3679 +9.7307 0.3761 +9.7437 0.3832 +9.7567 0.3889 +9.7697 0.3934 +9.7826 0.3964 +9.7956 0.3981 +9.8086 0.3983 +9.8216 0.3971 +9.8345 0.3945 +9.8475 0.3905 +9.8605 0.3851 +9.8734 0.3785 +9.8864 0.3706 +9.8994 0.3617 +9.9124 0.3516 +9.9253 0.3406 +9.9383 0.3288 +9.9513 0.3163 +9.9643 0.3031 +9.9772 0.2894 +9.9902 0.2754 +10.0032 0.2611 +10.0162 0.2467 +10.0291 0.2322 +10.0421 0.2178 +10.0551 0.2035 +10.0681 0.1895 +10.0810 0.1759 +10.0940 0.1626 +10.1070 0.1498 +10.1200 0.1375 +10.1329 0.1258 +10.1459 0.1146 +10.1589 0.1041 +10.1719 0.0942 +10.1848 0.0849 +10.1978 0.0763 +10.2108 0.0683 +10.2238 0.0609 +10.2367 0.0541 +10.2497 0.0480 +10.2627 0.0423 +10.2756 0.0372 +10.2886 0.0326 +10.3016 0.0285 +10.3146 0.0247 +10.3275 0.0214 +10.3405 0.0185 +10.3535 0.0159 +10.3665 0.0137 +10.3794 0.0117 +10.3924 0.0099 +10.4054 0.0084 +10.4184 0.0071 +10.4313 0.0060 +10.4443 0.0050 +10.4573 0.0042 +10.4703 0.0035 +10.4832 0.0029 +10.4962 0.0024 Oas1a 1 250 150 1 10 0 --3.0946 0.0034 --3.0304 0.0042 --2.9662 0.0051 --2.9019 0.0061 --2.8377 0.0073 --2.7735 0.0087 --2.7093 0.0104 --2.6450 0.0124 --2.5808 0.0146 --2.5166 0.0172 --2.4524 0.0201 --2.3881 0.0235 --2.3239 0.0273 --2.2597 0.0316 --2.1955 0.0364 --2.1312 0.0417 --2.0670 0.0477 --2.0028 0.0543 --1.9385 0.0616 --1.8743 0.0695 --1.8101 0.0782 --1.7459 0.0876 --1.6816 0.0977 --1.6174 0.1085 --1.5532 0.1201 --1.4890 0.1323 --1.4247 0.1452 --1.3605 0.1586 --1.2963 0.1727 --1.2320 0.1871 --1.1678 0.2020 --1.1036 0.2172 --1.0394 0.2325 --0.9751 0.2479 --0.9109 0.2633 --0.8467 0.2785 --0.7825 0.2933 --0.7182 0.3077 --0.6540 0.3214 --0.5898 0.3344 --0.5256 0.3465 --0.4613 0.3576 --0.3971 0.3675 --0.3329 0.3761 --0.2686 0.3834 --0.2044 0.3892 --0.1402 0.3935 --0.0760 0.3963 --0.0117 0.3974 -0.0525 0.3969 -0.1167 0.3947 -0.1809 0.3910 -0.2452 0.3857 -0.3094 0.3790 -0.3736 0.3708 -0.4378 0.3613 -0.5021 0.3507 -0.5663 0.3389 -0.6305 0.3263 -0.6948 0.3128 -0.7590 0.2986 -0.8232 0.2839 -0.8874 0.2689 -0.9517 0.2536 -1.0159 0.2382 -1.0801 0.2228 -1.1443 0.2075 -1.2086 0.1925 -1.2728 0.1779 -1.3370 0.1637 -1.4012 0.1500 -1.4655 0.1369 -1.5297 0.1245 -1.5939 0.1127 -1.6582 0.1016 -1.7224 0.0912 -1.7866 0.0816 -1.8508 0.0726 -1.9151 0.0644 -1.9793 0.0569 -2.0435 0.0501 -2.1077 0.0439 -2.1720 0.0383 -2.2362 0.0332 -2.3004 0.0288 -2.3646 0.0248 -2.4289 0.0213 -2.4931 0.0182 -2.5573 0.0155 -2.6216 0.0131 -2.6858 0.0111 -2.7500 0.0093 -2.8142 0.0078 -2.8785 0.0065 -2.9427 0.0054 -3.0069 0.0045 -3.0711 0.0037 -3.1354 0.0030 -3.1996 0.0025 -3.2638 0.0020 -3.3280 0.0016 +7.2067 0.0034 +7.2290 0.0042 +7.2513 0.0051 +7.2736 0.0061 +7.2959 0.0073 +7.3182 0.0087 +7.3405 0.0104 +7.3628 0.0124 +7.3851 0.0146 +7.4075 0.0172 +7.4298 0.0201 +7.4521 0.0235 +7.4744 0.0273 +7.4967 0.0316 +7.5190 0.0364 +7.5413 0.0417 +7.5636 0.0477 +7.5859 0.0543 +7.6082 0.0616 +7.6305 0.0695 +7.6528 0.0782 +7.6751 0.0876 +7.6974 0.0977 +7.7197 0.1085 +7.7420 0.1201 +7.7643 0.1323 +7.7867 0.1452 +7.8090 0.1586 +7.8313 0.1727 +7.8536 0.1871 +7.8759 0.2020 +7.8982 0.2172 +7.9205 0.2325 +7.9428 0.2479 +7.9651 0.2633 +7.9874 0.2785 +8.0097 0.2933 +8.0320 0.3077 +8.0543 0.3214 +8.0766 0.3344 +8.0989 0.3465 +8.1212 0.3576 +8.1436 0.3675 +8.1659 0.3761 +8.1882 0.3834 +8.2105 0.3892 +8.2328 0.3935 +8.2551 0.3963 +8.2774 0.3974 +8.2997 0.3969 +8.3220 0.3947 +8.3443 0.3910 +8.3666 0.3857 +8.3889 0.3790 +8.4112 0.3708 +8.4335 0.3613 +8.4558 0.3507 +8.4781 0.3389 +8.5004 0.3263 +8.5228 0.3128 +8.5451 0.2986 +8.5674 0.2839 +8.5897 0.2689 +8.6120 0.2536 +8.6343 0.2382 +8.6566 0.2228 +8.6789 0.2075 +8.7012 0.1925 +8.7235 0.1779 +8.7458 0.1637 +8.7681 0.1500 +8.7904 0.1369 +8.8127 0.1245 +8.8350 0.1127 +8.8573 0.1016 +8.8797 0.0912 +8.9020 0.0816 +8.9243 0.0726 +8.9466 0.0644 +8.9689 0.0569 +8.9912 0.0501 +9.0135 0.0439 +9.0358 0.0383 +9.0581 0.0332 +9.0804 0.0288 +9.1027 0.0248 +9.1250 0.0213 +9.1473 0.0182 +9.1696 0.0155 +9.1919 0.0131 +9.2142 0.0111 +9.2365 0.0093 +9.2589 0.0078 +9.2812 0.0065 +9.3035 0.0054 +9.3258 0.0045 +9.3481 0.0037 +9.3704 0.0030 +9.3927 0.0025 +9.4150 0.0020 +9.4373 0.0016 Ifit1 1 250 150 3 1 2 4 2 13 14 --2.8983 0.0063 --2.8370 0.0075 --2.7756 0.0089 --2.7142 0.0105 --2.6528 0.0124 --2.5915 0.0145 --2.5301 0.0169 --2.4687 0.0197 --2.4073 0.0228 --2.3460 0.0264 --2.2846 0.0303 --2.2232 0.0347 --2.1618 0.0397 --2.1005 0.0451 --2.0391 0.0511 --1.9777 0.0577 --1.9164 0.0649 --1.8550 0.0728 --1.7936 0.0812 --1.7322 0.0904 --1.6709 0.1002 --1.6095 0.1106 --1.5481 0.1217 --1.4867 0.1333 --1.4254 0.1456 --1.3640 0.1584 --1.3026 0.1717 --1.2412 0.1854 --1.1799 0.1995 --1.1185 0.2138 --1.0571 0.2284 --0.9957 0.2430 --0.9344 0.2576 --0.8730 0.2720 --0.8116 0.2862 --0.7502 0.3001 --0.6889 0.3134 --0.6275 0.3261 --0.5661 0.3381 --0.5047 0.3492 --0.4434 0.3593 --0.3820 0.3684 --0.3206 0.3763 --0.2592 0.3830 --0.1979 0.3883 --0.1365 0.3922 --0.0751 0.3948 --0.0137 0.3958 -0.0476 0.3954 -0.1090 0.3936 -0.1704 0.3902 -0.2318 0.3855 -0.2931 0.3795 -0.3545 0.3721 -0.4159 0.3635 -0.4773 0.3539 -0.5386 0.3432 -0.6000 0.3316 -0.6614 0.3192 -0.7228 0.3061 -0.7841 0.2925 -0.8455 0.2784 -0.9069 0.2641 -0.9682 0.2495 -1.0296 0.2349 -1.0910 0.2203 -1.1524 0.2059 -1.2137 0.1917 -1.2751 0.1778 -1.3365 0.1643 -1.3979 0.1513 -1.4592 0.1388 -1.5206 0.1268 -1.5820 0.1155 -1.6434 0.1047 -1.7047 0.0947 -1.7661 0.0852 -1.8275 0.0765 -1.8889 0.0683 -1.9502 0.0609 -2.0116 0.0540 -2.0730 0.0477 -2.1344 0.0420 -2.1957 0.0369 -2.2571 0.0322 -2.3185 0.0281 -2.3799 0.0244 -2.4412 0.0211 -2.5026 0.0181 -2.5640 0.0156 -2.6254 0.0133 -2.6867 0.0113 -2.7481 0.0096 -2.8095 0.0081 -2.8709 0.0068 -2.9322 0.0057 -2.9936 0.0048 -3.0550 0.0040 -3.1164 0.0033 -3.1777 0.0027 -3.2391 0.0023 +7.1788 0.0063 +7.2137 0.0075 +7.2487 0.0089 +7.2836 0.0105 +7.3185 0.0124 +7.3535 0.0145 +7.3884 0.0169 +7.4233 0.0197 +7.4583 0.0228 +7.4932 0.0264 +7.5281 0.0303 +7.5631 0.0347 +7.5980 0.0397 +7.6329 0.0451 +7.6679 0.0511 +7.7028 0.0577 +7.7377 0.0649 +7.7727 0.0728 +7.8076 0.0812 +7.8426 0.0904 +7.8775 0.1002 +7.9124 0.1106 +7.9474 0.1217 +7.9823 0.1333 +8.0172 0.1456 +8.0522 0.1584 +8.0871 0.1717 +8.1220 0.1854 +8.1570 0.1995 +8.1919 0.2138 +8.2268 0.2284 +8.2618 0.2430 +8.2967 0.2576 +8.3316 0.2720 +8.3666 0.2862 +8.4015 0.3001 +8.4364 0.3134 +8.4714 0.3261 +8.5063 0.3381 +8.5412 0.3492 +8.5762 0.3593 +8.6111 0.3684 +8.6460 0.3763 +8.6810 0.3830 +8.7159 0.3883 +8.7508 0.3922 +8.7858 0.3948 +8.8207 0.3958 +8.8556 0.3954 +8.8906 0.3936 +8.9255 0.3902 +8.9604 0.3855 +8.9954 0.3795 +9.0303 0.3721 +9.0652 0.3635 +9.1002 0.3539 +9.1351 0.3432 +9.1700 0.3316 +9.2050 0.3192 +9.2399 0.3061 +9.2748 0.2925 +9.3098 0.2784 +9.3447 0.2641 +9.3796 0.2495 +9.4146 0.2349 +9.4495 0.2203 +9.4844 0.2059 +9.5194 0.1917 +9.5543 0.1778 +9.5892 0.1643 +9.6242 0.1513 +9.6591 0.1388 +9.6940 0.1268 +9.7290 0.1155 +9.7639 0.1047 +9.7988 0.0947 +9.8338 0.0852 +9.8687 0.0765 +9.9036 0.0683 +9.9386 0.0609 +9.9735 0.0540 +10.0084 0.0477 +10.0434 0.0420 +10.0783 0.0369 +10.1133 0.0322 +10.1482 0.0281 +10.1831 0.0244 +10.2181 0.0211 +10.2530 0.0181 +10.2879 0.0156 +10.3229 0.0133 +10.3578 0.0113 +10.3927 0.0096 +10.4277 0.0081 +10.4626 0.0068 +10.4975 0.0057 +10.5325 0.0048 +10.5674 0.0040 +10.6023 0.0033 +10.6373 0.0027 +10.6722 0.0023 Mx1 1 250 150 2 4 12 0 --3.1709 0.0028 --3.0983 0.0035 --3.0258 0.0043 --2.9533 0.0053 --2.8808 0.0066 --2.8082 0.0081 --2.7357 0.0098 --2.6632 0.0119 --2.5907 0.0144 --2.5181 0.0173 --2.4456 0.0207 --2.3731 0.0246 --2.3006 0.0291 --2.2280 0.0342 --2.1555 0.0400 --2.0830 0.0465 --2.0105 0.0539 --1.9379 0.0621 --1.8654 0.0711 --1.7929 0.0811 --1.7204 0.0919 --1.6479 0.1037 --1.5753 0.1164 --1.5028 0.1300 --1.4303 0.1444 --1.3578 0.1595 --1.2852 0.1754 --1.2127 0.1918 --1.1402 0.2086 --1.0677 0.2258 --0.9951 0.2431 --0.9226 0.2604 --0.8501 0.2775 --0.7776 0.2941 --0.7050 0.3102 --0.6325 0.3254 --0.5600 0.3396 --0.4875 0.3526 --0.4149 0.3641 --0.3424 0.3742 --0.2699 0.3824 --0.1974 0.3889 --0.1248 0.3934 --0.0523 0.3959 -0.0202 0.3964 -0.0927 0.3948 -0.1653 0.3911 -0.2378 0.3855 -0.3103 0.3780 -0.3828 0.3688 -0.4554 0.3579 -0.5279 0.3455 -0.6004 0.3318 -0.6729 0.3170 -0.7455 0.3013 -0.8180 0.2849 -0.8905 0.2680 -0.9630 0.2508 -1.0356 0.2335 -1.1081 0.2162 -1.1806 0.1992 -1.2531 0.1826 -1.3257 0.1665 -1.3982 0.1510 -1.4707 0.1363 -1.5432 0.1223 -1.6158 0.1092 -1.6883 0.0970 -1.7608 0.0858 -1.8333 0.0754 -1.9059 0.0660 -1.9784 0.0574 -2.0509 0.0497 -2.1234 0.0428 -2.1959 0.0367 -2.2685 0.0312 -2.3410 0.0265 -2.4135 0.0223 -2.4860 0.0187 -2.5586 0.0156 -2.6311 0.0130 -2.7036 0.0107 -2.7761 0.0088 -2.8487 0.0072 -2.9212 0.0059 -2.9937 0.0047 -3.0662 0.0038 -3.1388 0.0031 -3.2113 0.0024 -3.2838 0.0019 -3.3563 0.0015 -3.4289 0.0012 -3.5014 0.0009 -3.5739 0.0007 -3.6464 0.0006 -3.7190 0.0004 -3.7915 0.0003 -3.8640 0.0002 -3.9365 0.0002 -4.0091 0.0001 -4.0816 0.0001 +6.4152 0.0028 +6.4396 0.0035 +6.4641 0.0043 +6.4885 0.0053 +6.5129 0.0066 +6.5373 0.0081 +6.5618 0.0098 +6.5862 0.0119 +6.6106 0.0144 +6.6350 0.0173 +6.6595 0.0207 +6.6839 0.0246 +6.7083 0.0291 +6.7327 0.0342 +6.7572 0.0400 +6.7816 0.0465 +6.8060 0.0539 +6.8304 0.0621 +6.8549 0.0711 +6.8793 0.0811 +6.9037 0.0919 +6.9281 0.1037 +6.9526 0.1164 +6.9770 0.1300 +7.0014 0.1444 +7.0259 0.1595 +7.0503 0.1754 +7.0747 0.1918 +7.0991 0.2086 +7.1236 0.2258 +7.1480 0.2431 +7.1724 0.2604 +7.1968 0.2775 +7.2213 0.2941 +7.2457 0.3102 +7.2701 0.3254 +7.2945 0.3396 +7.3190 0.3526 +7.3434 0.3641 +7.3678 0.3742 +7.3922 0.3824 +7.4167 0.3889 +7.4411 0.3934 +7.4655 0.3959 +7.4899 0.3964 +7.5144 0.3948 +7.5388 0.3911 +7.5632 0.3855 +7.5876 0.3780 +7.6121 0.3688 +7.6365 0.3579 +7.6609 0.3455 +7.6854 0.3318 +7.7098 0.3170 +7.7342 0.3013 +7.7586 0.2849 +7.7831 0.2680 +7.8075 0.2508 +7.8319 0.2335 +7.8563 0.2162 +7.8808 0.1992 +7.9052 0.1826 +7.9296 0.1665 +7.9540 0.1510 +7.9785 0.1363 +8.0029 0.1223 +8.0273 0.1092 +8.0517 0.0970 +8.0762 0.0858 +8.1006 0.0754 +8.1250 0.0660 +8.1494 0.0574 +8.1739 0.0497 +8.1983 0.0428 +8.2227 0.0367 +8.2471 0.0312 +8.2716 0.0265 +8.2960 0.0223 +8.3204 0.0187 +8.3449 0.0156 +8.3693 0.0130 +8.3937 0.0107 +8.4181 0.0088 +8.4426 0.0072 +8.4670 0.0059 +8.4914 0.0047 +8.5158 0.0038 +8.5403 0.0031 +8.5647 0.0024 +8.5891 0.0019 +8.6135 0.0015 +8.6380 0.0012 +8.6624 0.0009 +8.6868 0.0007 +8.7112 0.0006 +8.7357 0.0004 +8.7601 0.0003 +8.7845 0.0002 +8.8089 0.0002 +8.8334 0.0001 +8.8578 0.0001 Irf7 1 250 150 2 4 12 0 --3.9154 0.0002 --3.8440 0.0003 --3.7726 0.0004 --3.7012 0.0005 --3.6298 0.0006 --3.5583 0.0008 --3.4869 0.0010 --3.4155 0.0013 --3.3441 0.0016 --3.2727 0.0021 --3.2013 0.0026 --3.1299 0.0033 --3.0585 0.0040 --2.9871 0.0050 --2.9157 0.0061 --2.8443 0.0075 --2.7729 0.0091 --2.7015 0.0111 --2.6301 0.0133 --2.5587 0.0160 --2.4873 0.0191 --2.4159 0.0226 --2.3445 0.0267 --2.2730 0.0314 --2.2016 0.0367 --2.1302 0.0428 --2.0588 0.0495 --1.9874 0.0570 --1.9160 0.0654 --1.8446 0.0746 --1.7732 0.0846 --1.7018 0.0956 --1.6304 0.1074 --1.5590 0.1201 --1.4876 0.1336 --1.4162 0.1478 --1.3448 0.1628 --1.2734 0.1784 --1.2020 0.1946 --1.1306 0.2111 --1.0592 0.2279 --0.9878 0.2448 --0.9163 0.2617 --0.8449 0.2783 --0.7735 0.2946 --0.7021 0.3102 --0.6307 0.3250 --0.5593 0.3388 --0.4879 0.3514 --0.4165 0.3627 --0.3451 0.3725 --0.2737 0.3806 --0.2023 0.3870 --0.1309 0.3916 --0.0595 0.3942 -0.0119 0.3948 -0.0833 0.3935 -0.1547 0.3903 -0.2261 0.3851 -0.2975 0.3781 -0.3690 0.3694 -0.4404 0.3591 -0.5118 0.3473 -0.5832 0.3343 -0.6546 0.3201 -0.7260 0.3050 -0.7974 0.2892 -0.8688 0.2728 -0.9402 0.2561 -1.0116 0.2392 -1.0830 0.2223 -1.1544 0.2056 -1.2258 0.1891 -1.2972 0.1732 -1.3686 0.1577 -1.4400 0.1430 -1.5114 0.1290 -1.5828 0.1157 -1.6543 0.1033 -1.7257 0.0918 -1.7971 0.0812 -1.8685 0.0714 -1.9399 0.0625 -2.0113 0.0544 -2.0827 0.0472 -2.1541 0.0407 -2.2255 0.0349 -2.2969 0.0298 -2.3683 0.0253 -2.4397 0.0214 -2.5111 0.0180 -2.5825 0.0151 -2.6539 0.0125 -2.7253 0.0104 -2.7967 0.0086 -2.8681 0.0070 -2.9396 0.0057 -3.0110 0.0047 -3.0824 0.0038 -3.1538 0.0030 -3.2252 0.0024 +7.8614 0.0002 +7.9006 0.0003 +7.9398 0.0004 +7.9789 0.0005 +8.0181 0.0006 +8.0573 0.0008 +8.0965 0.0010 +8.1356 0.0013 +8.1748 0.0016 +8.2140 0.0021 +8.2531 0.0026 +8.2923 0.0033 +8.3315 0.0040 +8.3707 0.0050 +8.4098 0.0061 +8.4490 0.0075 +8.4882 0.0091 +8.5273 0.0111 +8.5665 0.0133 +8.6057 0.0160 +8.6449 0.0191 +8.6840 0.0226 +8.7232 0.0267 +8.7624 0.0314 +8.8015 0.0367 +8.8407 0.0428 +8.8799 0.0495 +8.9191 0.0570 +8.9582 0.0654 +8.9974 0.0746 +9.0366 0.0846 +9.0757 0.0956 +9.1149 0.1074 +9.1541 0.1201 +9.1933 0.1336 +9.2324 0.1478 +9.2716 0.1628 +9.3108 0.1784 +9.3499 0.1946 +9.3891 0.2111 +9.4283 0.2279 +9.4675 0.2448 +9.5066 0.2617 +9.5458 0.2783 +9.5850 0.2946 +9.6241 0.3102 +9.6633 0.3250 +9.7025 0.3388 +9.7417 0.3514 +9.7808 0.3627 +9.8200 0.3725 +9.8592 0.3806 +9.8983 0.3870 +9.9375 0.3916 +9.9767 0.3942 +10.0159 0.3948 +10.0550 0.3935 +10.0942 0.3903 +10.1334 0.3851 +10.1725 0.3781 +10.2117 0.3694 +10.2509 0.3591 +10.2901 0.3473 +10.3292 0.3343 +10.3684 0.3201 +10.4076 0.3050 +10.4467 0.2892 +10.4859 0.2728 +10.5251 0.2561 +10.5643 0.2392 +10.6034 0.2223 +10.6426 0.2056 +10.6818 0.1891 +10.7209 0.1732 +10.7601 0.1577 +10.7993 0.1430 +10.8385 0.1290 +10.8776 0.1157 +10.9168 0.1033 +10.9560 0.0918 +10.9951 0.0812 +11.0343 0.0714 +11.0735 0.0625 +11.1127 0.0544 +11.1518 0.0472 +11.1910 0.0407 +11.2302 0.0349 +11.2693 0.0298 +11.3085 0.0253 +11.3477 0.0214 +11.3869 0.0180 +11.4260 0.0151 +11.4652 0.0125 +11.5044 0.0104 +11.5435 0.0086 +11.5827 0.0070 +11.6219 0.0057 +11.6611 0.0047 +11.7002 0.0038 +11.7394 0.0030 +11.7786 0.0024 diff --git a/sourcecodes/data/example_chr2_spleen/cuLparameters.txt b/sourcecodes/data/example_chr2_spleen/cuLparameters.txt new file mode 100644 index 00000000..545d6e91 --- /dev/null +++ b/sourcecodes/data/example_chr2_spleen/cuLparameters.txt @@ -0,0 +1,57 @@ +rs3664317 +Discrete node with 2 states +1 0.5479 +2 0.4521 + +Oas1a +Continuous node +8.2815 0.3487 + +Parp9 +Continuous node +9.8042 0.2165 + +Dhx58 +Continuous node +8.8912 0.3029 + +Cd1d1 +Continuous node +9.6436 0.2679 + +Irf7 +Continuous node +10.0093 0.5542 + +Oas3 +Continuous node +8.9574 0.5062 + +Pml +Continuous node +11.0754 0.1911 + +Mx1 +Continuous node +7.4831 0.3389 + +Ifit1 +Continuous node +8.8285 0.5736 + +Trim25 +Continuous node +10.2552 0.1765 + +Oas1g +Continuous node +8.6322 0.4619 + +Pglyrp3 +Continuous node +6.0709 0.1286 + +Ifih1 +Continuous node +9.2981 0.3860 + diff --git a/sourcecodes/data/example_sci/Llumap.txt b/sourcecodes/data/example_sci/Llumap.txt index 958281d5..dfe8ca75 100644 --- a/sourcecodes/data/example_sci/Llumap.txt +++ b/sourcecodes/data/example_sci/Llumap.txt @@ -1,5 +1,5 @@ -Genotype 2 0.500305 1.514000 -Gene3 1 1.027261 -0.015284 -Gene2 1 1.160583 0.138097 -Phenotype 1 1.554104 0.069005 -Gene1 1 1.515414 0.174451 +Genotype 0.500305 1.514000 +Gene3 1.027261 -0.015284 +Gene2 1.160583 0.138097 +Phenotype 1.554104 0.069005 +Gene1 1.515414 0.174451 diff --git a/sourcecodes/data/example_sci/Llunet_figure.txt b/sourcecodes/data/example_sci/Llunet_figure.txt index bdc07cbd..2f383b1a 100644 --- a/sourcecodes/data/example_sci/Llunet_figure.txt +++ b/sourcecodes/data/example_sci/Llunet_figure.txt @@ -15,419 +15,419 @@ Gene1 1 250 150 1 1 1 3 --3.5013 0.0009 --3.4313 0.0012 --3.3613 0.0015 --3.2912 0.0019 --3.2212 0.0024 --3.1512 0.0030 --3.0811 0.0037 --3.0111 0.0046 --2.9411 0.0056 --2.8710 0.0069 --2.8010 0.0083 --2.7310 0.0101 --2.6609 0.0121 --2.5909 0.0145 --2.5209 0.0174 --2.4508 0.0206 --2.3808 0.0243 --2.3108 0.0286 --2.2407 0.0335 --2.1707 0.0389 --2.1007 0.0451 --2.0306 0.0520 --1.9606 0.0597 --1.8906 0.0682 --1.8205 0.0775 --1.7505 0.0876 --1.6805 0.0986 --1.6104 0.1105 --1.5404 0.1231 --1.4704 0.1366 --1.4003 0.1508 --1.3303 0.1657 --1.2603 0.1811 --1.1902 0.1971 --1.1202 0.2134 --1.0502 0.2300 --0.9801 0.2467 --0.9101 0.2633 --0.8401 0.2797 --0.7700 0.2956 --0.7000 0.3110 --0.6300 0.3256 --0.5599 0.3392 --0.4899 0.3517 --0.4199 0.3629 --0.3498 0.3726 --0.2798 0.3808 --0.2098 0.3873 --0.1397 0.3920 --0.0697 0.3948 -0.0003 0.3958 -0.0704 0.3948 -0.1404 0.3920 -0.2104 0.3872 -0.2805 0.3807 -0.3505 0.3726 -0.4205 0.3628 -0.4906 0.3516 -0.5606 0.3391 -0.6306 0.3254 -0.7007 0.3108 -0.7707 0.2955 -0.8407 0.2795 -0.9108 0.2631 -0.9808 0.2465 -1.0508 0.2299 -1.1209 0.2133 -1.1909 0.1969 -1.2609 0.1810 -1.3310 0.1655 -1.4010 0.1507 -1.4710 0.1365 -1.5411 0.1230 -1.6111 0.1103 -1.6811 0.0985 -1.7512 0.0875 -1.8212 0.0774 -1.8912 0.0681 -1.9613 0.0596 -2.0313 0.0520 -2.1013 0.0451 -2.1714 0.0389 -2.2414 0.0334 -2.3114 0.0286 -2.3815 0.0243 -2.4515 0.0206 -2.5215 0.0173 -2.5916 0.0145 -2.6616 0.0121 -2.7316 0.0101 -2.8017 0.0083 -2.8717 0.0068 -2.9417 0.0056 -3.0118 0.0046 -3.0818 0.0037 -3.1518 0.0030 -3.2219 0.0024 -3.2919 0.0019 -3.3619 0.0015 -3.4320 0.0012 -3.5020 0.0009 +-5.1315 0.0009 +-5.0254 0.0012 +-4.9193 0.0015 +-4.8131 0.0019 +-4.7070 0.0024 +-4.6009 0.0030 +-4.4947 0.0037 +-4.3886 0.0046 +-4.2825 0.0056 +-4.1764 0.0069 +-4.0702 0.0083 +-3.9641 0.0101 +-3.8580 0.0121 +-3.7518 0.0145 +-3.6457 0.0174 +-3.5396 0.0206 +-3.4334 0.0243 +-3.3273 0.0286 +-3.2212 0.0335 +-3.1151 0.0389 +-3.0089 0.0451 +-2.9028 0.0520 +-2.7967 0.0597 +-2.6905 0.0682 +-2.5844 0.0775 +-2.4783 0.0876 +-2.3722 0.0986 +-2.2660 0.1105 +-2.1599 0.1231 +-2.0538 0.1366 +-1.9476 0.1508 +-1.8415 0.1657 +-1.7354 0.1811 +-1.6292 0.1971 +-1.5231 0.2134 +-1.4170 0.2300 +-1.3109 0.2467 +-1.2047 0.2633 +-1.0986 0.2797 +-0.9925 0.2956 +-0.8863 0.3110 +-0.7802 0.3256 +-0.6741 0.3392 +-0.5680 0.3517 +-0.4618 0.3629 +-0.3557 0.3726 +-0.2496 0.3808 +-0.1434 0.3873 +-0.0373 0.3920 +0.0688 0.3948 +0.1749 0.3958 +0.2811 0.3948 +0.3872 0.3920 +0.4933 0.3872 +0.5995 0.3807 +0.7056 0.3726 +0.8117 0.3628 +0.9179 0.3516 +1.0240 0.3391 +1.1301 0.3254 +1.2362 0.3108 +1.3424 0.2955 +1.4485 0.2795 +1.5546 0.2631 +1.6608 0.2465 +1.7669 0.2299 +1.8730 0.2133 +1.9791 0.1969 +2.0853 0.1810 +2.1914 0.1655 +2.2975 0.1507 +2.4037 0.1365 +2.5098 0.1230 +2.6159 0.1103 +2.7221 0.0985 +2.8282 0.0875 +2.9343 0.0774 +3.0404 0.0681 +3.1466 0.0596 +3.2527 0.0520 +3.3588 0.0451 +3.4650 0.0389 +3.5711 0.0334 +3.6772 0.0286 +3.7833 0.0243 +3.8895 0.0206 +3.9956 0.0173 +4.1017 0.0145 +4.2079 0.0121 +4.3140 0.0101 +4.4201 0.0083 +4.5263 0.0068 +4.6324 0.0056 +4.7385 0.0046 +4.8446 0.0037 +4.9508 0.0030 +5.0569 0.0024 +5.1630 0.0019 +5.2692 0.0015 +5.3753 0.0012 +5.4814 0.0009 Gene2 1 250 150 1 2 2 4 5 --3.5862 0.0008 --3.5124 0.0010 --3.4385 0.0013 --3.3647 0.0016 --3.2909 0.0020 --3.2171 0.0026 --3.1432 0.0032 --3.0694 0.0041 --2.9956 0.0050 --2.9218 0.0062 --2.8479 0.0077 --2.7741 0.0094 --2.7003 0.0114 --2.6264 0.0138 --2.5526 0.0166 --2.4788 0.0199 --2.4050 0.0237 --2.3311 0.0281 --2.2573 0.0331 --2.1835 0.0388 --2.1097 0.0453 --2.0358 0.0526 --1.9620 0.0607 --1.8882 0.0696 --1.8143 0.0795 --1.7405 0.0903 --1.6667 0.1021 --1.5929 0.1147 --1.5190 0.1282 --1.4452 0.1426 --1.3714 0.1578 --1.2976 0.1736 --1.2237 0.1900 --1.1499 0.2069 --1.0761 0.2241 --1.0022 0.2414 --0.9284 0.2587 --0.8546 0.2758 --0.7808 0.2924 --0.7069 0.3084 --0.6331 0.3236 --0.5593 0.3377 --0.4855 0.3506 --0.4116 0.3621 --0.3378 0.3719 --0.2640 0.3800 --0.1901 0.3863 --0.1163 0.3905 --0.0425 0.3927 -0.0313 0.3929 -0.1052 0.3910 -0.1790 0.3870 -0.2528 0.3811 -0.3266 0.3732 -0.4005 0.3636 -0.4743 0.3524 -0.5481 0.3397 -0.6220 0.3258 -0.6958 0.3108 -0.7696 0.2949 -0.8434 0.2783 -0.9173 0.2613 -0.9911 0.2440 -1.0649 0.2267 -1.1387 0.2095 -1.2126 0.1925 -1.2864 0.1760 -1.3602 0.1601 -1.4341 0.1449 -1.5079 0.1304 -1.5817 0.1167 -1.6555 0.1039 -1.7294 0.0920 -1.8032 0.0811 -1.8770 0.0711 -1.9508 0.0620 -2.0247 0.0537 -2.0985 0.0464 -2.1723 0.0398 -2.2462 0.0340 -2.3200 0.0288 -2.3938 0.0243 -2.4676 0.0205 -2.5415 0.0171 -2.6153 0.0142 -2.6891 0.0117 -2.7629 0.0097 -2.8368 0.0079 -2.9106 0.0064 -2.9844 0.0052 -3.0583 0.0042 -3.1321 0.0034 -3.2059 0.0027 -3.2797 0.0021 -3.3536 0.0017 -3.4274 0.0013 -3.5012 0.0010 -3.5750 0.0008 -3.6489 0.0006 -3.7227 0.0005 -3.7965 0.0004 +-4.0240 0.0008 +-3.9383 0.0010 +-3.8526 0.0013 +-3.7669 0.0016 +-3.6813 0.0020 +-3.5956 0.0026 +-3.5099 0.0032 +-3.4242 0.0041 +-3.3385 0.0050 +-3.2528 0.0062 +-3.1672 0.0077 +-3.0815 0.0094 +-2.9958 0.0114 +-2.9101 0.0138 +-2.8244 0.0166 +-2.7387 0.0199 +-2.6531 0.0237 +-2.5674 0.0281 +-2.4817 0.0331 +-2.3960 0.0388 +-2.3103 0.0453 +-2.2246 0.0526 +-2.1390 0.0607 +-2.0533 0.0696 +-1.9676 0.0795 +-1.8819 0.0903 +-1.7962 0.1021 +-1.7106 0.1147 +-1.6249 0.1282 +-1.5392 0.1426 +-1.4535 0.1578 +-1.3678 0.1736 +-1.2821 0.1900 +-1.1965 0.2069 +-1.1108 0.2241 +-1.0251 0.2414 +-0.9394 0.2587 +-0.8537 0.2758 +-0.7680 0.2924 +-0.6824 0.3084 +-0.5967 0.3236 +-0.5110 0.3377 +-0.4253 0.3506 +-0.3396 0.3621 +-0.2539 0.3719 +-0.1683 0.3800 +-0.0826 0.3863 +0.0031 0.3905 +0.0888 0.3927 +0.1745 0.3929 +0.2601 0.3910 +0.3458 0.3870 +0.4315 0.3811 +0.5172 0.3732 +0.6029 0.3636 +0.6886 0.3524 +0.7742 0.3397 +0.8599 0.3258 +0.9456 0.3108 +1.0313 0.2949 +1.1170 0.2783 +1.2027 0.2613 +1.2883 0.2440 +1.3740 0.2267 +1.4597 0.2095 +1.5454 0.1925 +1.6311 0.1760 +1.7168 0.1601 +1.8024 0.1449 +1.8881 0.1304 +1.9738 0.1167 +2.0595 0.1039 +2.1452 0.0920 +2.2309 0.0811 +2.3165 0.0711 +2.4022 0.0620 +2.4879 0.0537 +2.5736 0.0464 +2.6593 0.0398 +2.7449 0.0340 +2.8306 0.0288 +2.9163 0.0243 +3.0020 0.0205 +3.0877 0.0171 +3.1734 0.0142 +3.2590 0.0117 +3.3447 0.0097 +3.4304 0.0079 +3.5161 0.0064 +3.6018 0.0052 +3.6875 0.0042 +3.7731 0.0034 +3.8588 0.0027 +3.9445 0.0021 +4.0302 0.0017 +4.1159 0.0013 +4.2016 0.0010 +4.2872 0.0008 +4.3729 0.0006 +4.4586 0.0005 +4.5443 0.0004 Gene3 1 250 150 2 1 3 1 5 --4.3571 0.0001 --4.2762 0.0001 --4.1954 0.0001 --4.1145 0.0001 --4.0336 0.0002 --3.9527 0.0002 --3.8719 0.0003 --3.7910 0.0004 --3.7101 0.0006 --3.6293 0.0008 --3.5484 0.0010 --3.4675 0.0013 --3.3866 0.0018 --3.3058 0.0023 --3.2249 0.0029 --3.1440 0.0037 --3.0632 0.0047 --2.9823 0.0059 --2.9014 0.0074 --2.8205 0.0092 --2.7397 0.0113 --2.6588 0.0139 --2.5779 0.0170 --2.4971 0.0206 --2.4162 0.0248 --2.3353 0.0297 --2.2544 0.0354 --2.1736 0.0419 --2.0927 0.0493 --2.0118 0.0576 --1.9310 0.0669 --1.8501 0.0773 --1.7692 0.0887 --1.6883 0.1012 --1.6075 0.1147 --1.5266 0.1292 --1.4457 0.1447 --1.3648 0.1610 --1.2840 0.1781 --1.2031 0.1958 --1.1222 0.2139 --1.0414 0.2323 --0.9605 0.2507 --0.8796 0.2688 --0.7987 0.2866 --0.7179 0.3036 --0.6370 0.3197 --0.5561 0.3345 --0.4753 0.3479 --0.3944 0.3597 --0.3135 0.3695 --0.2326 0.3773 --0.1518 0.3828 --0.0709 0.3861 -0.0100 0.3870 -0.0908 0.3855 -0.1717 0.3817 -0.2526 0.3756 -0.3335 0.3673 -0.4143 0.3570 -0.4952 0.3449 -0.5761 0.3311 -0.6569 0.3160 -0.7378 0.2996 -0.8187 0.2824 -0.8996 0.2645 -0.9804 0.2463 -1.0613 0.2279 -1.1422 0.2095 -1.2230 0.1915 -1.3039 0.1740 -1.3848 0.1570 -1.4657 0.1409 -1.5465 0.1256 -1.6274 0.1114 -1.7083 0.0981 -1.7891 0.0859 -1.8700 0.0747 -1.9509 0.0646 -2.0318 0.0555 -2.1126 0.0474 -2.1935 0.0402 -2.2744 0.0340 -2.3552 0.0285 -2.4361 0.0237 -2.5170 0.0197 -2.5979 0.0162 -2.6787 0.0132 -2.7596 0.0108 -2.8405 0.0087 -2.9213 0.0070 -3.0022 0.0056 -3.0831 0.0044 -3.1640 0.0035 -3.2448 0.0027 -3.3257 0.0021 -3.4066 0.0016 -3.4874 0.0013 -3.5683 0.0010 -3.6492 0.0007 -3.7301 0.0006 +-4.4912 0.0001 +-4.4081 0.0001 +-4.3250 0.0001 +-4.2419 0.0001 +-4.1589 0.0002 +-4.0758 0.0002 +-3.9927 0.0003 +-3.9096 0.0004 +-3.8266 0.0006 +-3.7435 0.0008 +-3.6604 0.0010 +-3.5773 0.0013 +-3.4942 0.0018 +-3.4112 0.0023 +-3.3281 0.0029 +-3.2450 0.0037 +-3.1619 0.0047 +-3.0789 0.0059 +-2.9958 0.0074 +-2.9127 0.0092 +-2.8296 0.0113 +-2.7466 0.0139 +-2.6635 0.0170 +-2.5804 0.0206 +-2.4973 0.0248 +-2.4143 0.0297 +-2.3312 0.0354 +-2.2481 0.0419 +-2.1650 0.0493 +-2.0820 0.0576 +-1.9989 0.0669 +-1.9158 0.0773 +-1.8327 0.0887 +-1.7496 0.1012 +-1.6666 0.1147 +-1.5835 0.1292 +-1.5004 0.1447 +-1.4173 0.1610 +-1.3343 0.1781 +-1.2512 0.1958 +-1.1681 0.2139 +-1.0850 0.2323 +-1.0020 0.2507 +-0.9189 0.2688 +-0.8358 0.2866 +-0.7527 0.3036 +-0.6697 0.3197 +-0.5866 0.3345 +-0.5035 0.3479 +-0.4204 0.3597 +-0.3373 0.3695 +-0.2543 0.3773 +-0.1712 0.3828 +-0.0881 0.3861 +-0.0050 0.3870 +0.0780 0.3855 +0.1611 0.3817 +0.2442 0.3756 +0.3273 0.3673 +0.4103 0.3570 +0.4934 0.3449 +0.5765 0.3311 +0.6596 0.3160 +0.7426 0.2996 +0.8257 0.2824 +0.9088 0.2645 +0.9919 0.2463 +1.0749 0.2279 +1.1580 0.2095 +1.2411 0.1915 +1.3242 0.1740 +1.4073 0.1570 +1.4903 0.1409 +1.5734 0.1256 +1.6565 0.1114 +1.7396 0.0981 +1.8226 0.0859 +1.9057 0.0747 +1.9888 0.0646 +2.0719 0.0555 +2.1549 0.0474 +2.2380 0.0402 +2.3211 0.0340 +2.4042 0.0285 +2.4872 0.0237 +2.5703 0.0197 +2.6534 0.0162 +2.7365 0.0132 +2.8195 0.0108 +2.9026 0.0087 +2.9857 0.0070 +3.0688 0.0056 +3.1519 0.0044 +3.2349 0.0035 +3.3180 0.0027 +3.4011 0.0021 +3.4842 0.0016 +3.5672 0.0013 +3.6503 0.0010 +3.7334 0.0007 +3.8165 0.0006 Phenotype 1 250 150 2 3 4 0 --3.5574 0.0010 --3.4806 0.0013 --3.4037 0.0016 --3.3268 0.0021 --3.2499 0.0026 --3.1731 0.0033 --3.0962 0.0042 --3.0193 0.0052 --2.9425 0.0065 --2.8656 0.0080 --2.7887 0.0098 --2.7118 0.0120 --2.6350 0.0146 --2.5581 0.0176 --2.4812 0.0212 --2.4044 0.0253 --2.3275 0.0300 --2.2506 0.0354 --2.1737 0.0416 --2.0969 0.0486 --2.0200 0.0564 --1.9431 0.0651 --1.8663 0.0748 --1.7894 0.0854 --1.7125 0.0970 --1.6356 0.1096 --1.5588 0.1230 --1.4819 0.1374 --1.4050 0.1526 --1.3282 0.1685 --1.2513 0.1850 --1.1744 0.2021 --1.0975 0.2195 --1.0207 0.2370 --0.9438 0.2545 --0.8669 0.2718 --0.7901 0.2887 --0.7132 0.3049 --0.6363 0.3202 --0.5594 0.3344 --0.4826 0.3473 --0.4057 0.3587 --0.3288 0.3684 --0.2520 0.3763 --0.1751 0.3822 --0.0982 0.3860 --0.0213 0.3877 -0.0555 0.3872 -0.1324 0.3846 -0.2093 0.3798 -0.2861 0.3731 -0.3630 0.3644 -0.4399 0.3539 -0.5168 0.3418 -0.5936 0.3283 -0.6705 0.3136 -0.7474 0.2979 -0.8242 0.2813 -0.9011 0.2643 -0.9780 0.2468 -1.0549 0.2293 -1.1317 0.2118 -1.2086 0.1945 -1.2855 0.1777 -1.3623 0.1614 -1.4392 0.1458 -1.5161 0.1310 -1.5930 0.1170 -1.6698 0.1039 -1.7467 0.0918 -1.8236 0.0806 -1.9004 0.0704 -1.9773 0.0612 -2.0542 0.0529 -2.1311 0.0454 -2.2079 0.0388 -2.2848 0.0329 -2.3617 0.0278 -2.4385 0.0234 -2.5154 0.0195 -2.5923 0.0162 -2.6692 0.0134 -2.7460 0.0110 -2.8229 0.0090 -2.8998 0.0073 -2.9766 0.0059 -3.0535 0.0047 -3.1304 0.0038 -3.2073 0.0030 -3.2841 0.0024 -3.3610 0.0019 -3.4379 0.0015 -3.5147 0.0011 -3.5916 0.0009 -3.6685 0.0007 -3.7454 0.0005 -3.8222 0.0004 -3.8991 0.0003 -3.9760 0.0002 -4.0528 0.0002 -4.1297 0.0001 +-5.4596 0.0010 +-5.3401 0.0013 +-5.2207 0.0016 +-5.1012 0.0021 +-4.9817 0.0026 +-4.8623 0.0033 +-4.7428 0.0042 +-4.6233 0.0052 +-4.5039 0.0065 +-4.3844 0.0080 +-4.2649 0.0098 +-4.1455 0.0120 +-4.0260 0.0146 +-3.9065 0.0176 +-3.7871 0.0212 +-3.6676 0.0253 +-3.5481 0.0300 +-3.4287 0.0354 +-3.3092 0.0416 +-3.1897 0.0486 +-3.0703 0.0564 +-2.9508 0.0651 +-2.8314 0.0748 +-2.7119 0.0854 +-2.5924 0.0970 +-2.4730 0.1096 +-2.3535 0.1230 +-2.2340 0.1374 +-2.1146 0.1526 +-1.9951 0.1685 +-1.8756 0.1850 +-1.7562 0.2021 +-1.6367 0.2195 +-1.5172 0.2370 +-1.3978 0.2545 +-1.2783 0.2718 +-1.1588 0.2887 +-1.0394 0.3049 +-0.9199 0.3202 +-0.8004 0.3344 +-0.6810 0.3473 +-0.5615 0.3587 +-0.4420 0.3684 +-0.3226 0.3763 +-0.2031 0.3822 +-0.0836 0.3860 +0.0358 0.3877 +0.1553 0.3872 +0.2748 0.3846 +0.3942 0.3798 +0.5137 0.3731 +0.6332 0.3644 +0.7526 0.3539 +0.8721 0.3418 +0.9916 0.3283 +1.1110 0.3136 +1.2305 0.2979 +1.3500 0.2813 +1.4694 0.2643 +1.5889 0.2468 +1.7084 0.2293 +1.8278 0.2118 +1.9473 0.1945 +2.0668 0.1777 +2.1862 0.1614 +2.3057 0.1458 +2.4252 0.1310 +2.5446 0.1170 +2.6641 0.1039 +2.7836 0.0918 +2.9030 0.0806 +3.0225 0.0704 +3.1420 0.0612 +3.2614 0.0529 +3.3809 0.0454 +3.5004 0.0388 +3.6198 0.0329 +3.7393 0.0278 +3.8588 0.0234 +3.9782 0.0195 +4.0977 0.0162 +4.2171 0.0134 +4.3366 0.0110 +4.4561 0.0090 +4.5755 0.0073 +4.6950 0.0059 +4.8145 0.0047 +4.9339 0.0038 +5.0534 0.0030 +5.1729 0.0024 +5.2923 0.0019 +5.4118 0.0015 +5.5313 0.0011 +5.6507 0.0009 +5.7702 0.0007 +5.8897 0.0005 +6.0091 0.0004 +6.1286 0.0003 +6.2481 0.0002 +6.3675 0.0002 +6.4870 0.0001 diff --git a/sourcecodes/data/example_sci/Lluparameters.txt b/sourcecodes/data/example_sci/Lluparameters.txt new file mode 100644 index 00000000..11583baa --- /dev/null +++ b/sourcecodes/data/example_sci/Lluparameters.txt @@ -0,0 +1,21 @@ +Genotype +Discrete node with 2 states +1 0.4860 +2 0.5140 + +Gene3 +Continuous node +-0.0150 1.0589 + +Gene2 +Continuous node +0.1381 1.1779 + +Phenotype +Continuous node +0.0693 1.5989 + +Gene1 +Continuous node +0.1745 1.5275 + diff --git a/sourcecodes/data/example_time_series/TEbmap.txt b/sourcecodes/data/example_time_series/TEbmap.txt index a9e0ef24..20f9b470 100644 --- a/sourcecodes/data/example_time_series/TEbmap.txt +++ b/sourcecodes/data/example_time_series/TEbmap.txt @@ -1,10 +1,10 @@ -Genotype 1 0.499053 1.462000 -TraitA_T1 1 1.306059 0.037189 -TraitA_T2 1 1.304164 -0.061147 -TraitA_T3 1 1.174305 -0.083449 -TraitB_T1 2 0.929161 -0.056347 -TraitB_T2 1 1.021691 -0.045299 -TraitB_T3 1 0.940946 0.012204 -TraitC_T1 1 0.907725 -0.001607 -TraitC_T2 1 0.923711 0.091657 -TraitC_T3 1 1.015189 0.017718 +Genotype 0.499053 1.462000 +TraitA_T1 1.306059 0.037189 +TraitA_T2 1.304164 -0.061147 +TraitA_T3 1.174305 -0.083449 +TraitB_T1 0.929161 -0.056347 +TraitB_T2 1.021691 -0.045299 +TraitB_T3 0.940946 0.012204 +TraitC_T1 0.907725 -0.001607 +TraitC_T2 0.923711 0.091657 +TraitC_T3 1.015189 0.017718 diff --git a/sourcecodes/data/example_time_series/TEbnet_figure.txt b/sourcecodes/data/example_time_series/TEbnet_figure.txt index 7b46ba95..1cceadd2 100644 --- a/sourcecodes/data/example_time_series/TEbnet_figure.txt +++ b/sourcecodes/data/example_time_series/TEbnet_figure.txt @@ -14,422 +14,422 @@ TraitC_T2 1 250 150 0 0 --4.0699 0.0001 --3.9911 0.0002 --3.9123 0.0002 --3.8335 0.0003 --3.7548 0.0004 --3.6760 0.0005 --3.5972 0.0007 --3.5185 0.0009 --3.4397 0.0012 --3.3609 0.0015 --3.2821 0.0020 --3.2034 0.0025 --3.1246 0.0032 --3.0458 0.0041 --2.9670 0.0052 --2.8883 0.0065 --2.8095 0.0081 --2.7307 0.0101 --2.6520 0.0124 --2.5732 0.0152 --2.4944 0.0185 --2.4156 0.0224 --2.3369 0.0269 --2.2581 0.0322 --2.1793 0.0382 --2.1006 0.0451 --2.0218 0.0529 --1.9430 0.0617 --1.8642 0.0716 --1.7855 0.0824 --1.7067 0.0944 --1.6279 0.1074 --1.5492 0.1215 --1.4704 0.1366 --1.3916 0.1526 --1.3128 0.1695 --1.2341 0.1871 --1.1553 0.2052 --1.0765 0.2238 --0.9978 0.2425 --0.9190 0.2612 --0.8402 0.2796 --0.7614 0.2975 --0.6827 0.3147 --0.6039 0.3308 --0.5251 0.3456 --0.4464 0.3588 --0.3676 0.3703 --0.2888 0.3799 --0.2100 0.3873 --0.1313 0.3924 --0.0525 0.3952 -0.0263 0.3956 -0.1050 0.3936 -0.1838 0.3892 -0.2626 0.3826 -0.3414 0.3737 -0.4201 0.3629 -0.4989 0.3502 -0.5777 0.3358 -0.6564 0.3202 -0.7352 0.3033 -0.8140 0.2857 -0.8928 0.2674 -0.9715 0.2487 -1.0503 0.2300 -1.1291 0.2114 -1.2078 0.1930 -1.2866 0.1753 -1.3654 0.1581 -1.4442 0.1418 -1.5229 0.1264 -1.6017 0.1120 -1.6805 0.0986 -1.7592 0.0863 -1.8380 0.0751 -1.9168 0.0649 -1.9956 0.0558 -2.0743 0.0476 -2.1531 0.0404 -2.2319 0.0341 -2.3106 0.0286 -2.3894 0.0238 -2.4682 0.0197 -2.5470 0.0163 -2.6257 0.0133 -2.7045 0.0108 -2.7833 0.0087 -2.8620 0.0070 -2.9408 0.0056 -3.0196 0.0045 -3.0984 0.0035 -3.1771 0.0028 -3.2559 0.0021 -3.3347 0.0017 -3.4134 0.0013 -3.4922 0.0010 -3.5710 0.0007 -3.6498 0.0006 -3.7285 0.0004 -3.8073 0.0003 +-3.6677 0.0001 +-3.5949 0.0002 +-3.5222 0.0002 +-3.4494 0.0003 +-3.3767 0.0004 +-3.3039 0.0005 +-3.2311 0.0007 +-3.1584 0.0009 +-3.0856 0.0012 +-3.0129 0.0015 +-2.9401 0.0020 +-2.8673 0.0025 +-2.7946 0.0032 +-2.7218 0.0041 +-2.6490 0.0052 +-2.5763 0.0065 +-2.5035 0.0081 +-2.4308 0.0101 +-2.3580 0.0124 +-2.2852 0.0152 +-2.2125 0.0185 +-2.1397 0.0224 +-2.0669 0.0269 +-1.9942 0.0322 +-1.9214 0.0382 +-1.8487 0.0451 +-1.7759 0.0529 +-1.7031 0.0617 +-1.6304 0.0716 +-1.5576 0.0824 +-1.4848 0.0944 +-1.4121 0.1074 +-1.3393 0.1215 +-1.2666 0.1366 +-1.1938 0.1526 +-1.1210 0.1695 +-1.0483 0.1871 +-0.9755 0.2052 +-0.9027 0.2238 +-0.8300 0.2425 +-0.7572 0.2612 +-0.6845 0.2796 +-0.6117 0.2975 +-0.5389 0.3147 +-0.4662 0.3308 +-0.3934 0.3456 +-0.3206 0.3588 +-0.2479 0.3703 +-0.1751 0.3799 +-0.1024 0.3873 +-0.0296 0.3924 +0.0432 0.3952 +0.1159 0.3956 +0.1887 0.3936 +0.2614 0.3892 +0.3342 0.3826 +0.4070 0.3737 +0.4797 0.3629 +0.5525 0.3502 +0.6253 0.3358 +0.6980 0.3202 +0.7708 0.3033 +0.8435 0.2857 +0.9163 0.2674 +0.9891 0.2487 +1.0618 0.2300 +1.1346 0.2114 +1.2074 0.1930 +1.2801 0.1753 +1.3529 0.1581 +1.4256 0.1418 +1.4984 0.1264 +1.5712 0.1120 +1.6439 0.0986 +1.7167 0.0863 +1.7895 0.0751 +1.8622 0.0649 +1.9350 0.0558 +2.0077 0.0476 +2.0805 0.0404 +2.1533 0.0341 +2.2260 0.0286 +2.2988 0.0238 +2.3716 0.0197 +2.4443 0.0163 +2.5171 0.0133 +2.5898 0.0108 +2.6626 0.0087 +2.7354 0.0070 +2.8081 0.0056 +2.8809 0.0045 +2.9537 0.0035 +3.0264 0.0028 +3.0992 0.0021 +3.1719 0.0017 +3.2447 0.0013 +3.3175 0.0010 +3.3902 0.0007 +3.4630 0.0006 +3.5357 0.0004 +3.6085 0.0003 TraitC_T1 1 250 150 0 0 --3.8413 0.0003 --3.7581 0.0004 --3.6749 0.0005 --3.5917 0.0007 --3.5086 0.0009 --3.4254 0.0012 --3.3422 0.0016 --3.2591 0.0021 --3.1759 0.0028 --3.0927 0.0036 --3.0095 0.0046 --2.9264 0.0059 --2.8432 0.0074 --2.7600 0.0093 --2.6768 0.0116 --2.5937 0.0144 --2.5105 0.0178 --2.4273 0.0218 --2.3441 0.0265 --2.2610 0.0320 --2.1778 0.0384 --2.0946 0.0457 --2.0114 0.0540 --1.9283 0.0635 --1.8451 0.0741 --1.7619 0.0859 --1.6787 0.0989 --1.5956 0.1131 --1.5124 0.1284 --1.4292 0.1448 --1.3460 0.1623 --1.2629 0.1806 --1.1797 0.1995 --1.0965 0.2190 --1.0133 0.2388 --0.9302 0.2585 --0.8470 0.2781 --0.7638 0.2970 --0.6806 0.3151 --0.5975 0.3320 --0.5143 0.3475 --0.4311 0.3612 --0.3479 0.3729 --0.2648 0.3824 --0.1816 0.3894 --0.0984 0.3939 --0.0152 0.3957 -0.0679 0.3949 -0.1511 0.3914 -0.2343 0.3852 -0.3174 0.3766 -0.4006 0.3657 -0.4838 0.3527 -0.5670 0.3379 -0.6501 0.3215 -0.7333 0.3038 -0.8165 0.2851 -0.8997 0.2657 -0.9828 0.2460 -1.0660 0.2262 -1.1492 0.2066 -1.2324 0.1874 -1.3155 0.1689 -1.3987 0.1511 -1.4819 0.1343 -1.5651 0.1186 -1.6482 0.1040 -1.7314 0.0905 -1.8146 0.0783 -1.8978 0.0673 -1.9809 0.0574 -2.0641 0.0486 -2.1473 0.0409 -2.2305 0.0342 -2.3136 0.0284 -2.3968 0.0234 -2.4800 0.0192 -2.5632 0.0156 -2.6463 0.0126 -2.7295 0.0101 -2.8127 0.0081 -2.8959 0.0064 -2.9790 0.0050 -3.0622 0.0039 -3.1454 0.0030 -3.2286 0.0023 -3.3117 0.0018 -3.3949 0.0014 -3.4781 0.0010 -3.5613 0.0008 -3.6444 0.0006 -3.7276 0.0004 -3.8108 0.0003 -3.8940 0.0002 -3.9771 0.0002 -4.0603 0.0001 -4.1435 0.0001 -4.2266 0.0001 -4.3098 0.0000 -4.3930 0.0000 -4.4762 0.0000 +-3.4884 0.0003 +-3.4129 0.0004 +-3.3374 0.0005 +-3.2619 0.0007 +-3.1864 0.0009 +-3.1109 0.0012 +-3.0354 0.0016 +-2.9599 0.0021 +-2.8844 0.0028 +-2.8089 0.0036 +-2.7334 0.0046 +-2.6579 0.0059 +-2.5824 0.0074 +-2.5069 0.0093 +-2.4314 0.0116 +-2.3559 0.0144 +-2.2804 0.0178 +-2.2049 0.0218 +-2.1294 0.0265 +-2.0539 0.0320 +-1.9784 0.0384 +-1.9029 0.0457 +-1.8274 0.0540 +-1.7519 0.0635 +-1.6764 0.0741 +-1.6009 0.0859 +-1.5254 0.0989 +-1.4499 0.1131 +-1.3744 0.1284 +-1.2989 0.1448 +-1.2234 0.1623 +-1.1479 0.1806 +-1.0724 0.1995 +-0.9969 0.2190 +-0.9214 0.2388 +-0.8459 0.2585 +-0.7704 0.2781 +-0.6949 0.2970 +-0.6194 0.3151 +-0.5439 0.3320 +-0.4684 0.3475 +-0.3929 0.3612 +-0.3174 0.3729 +-0.2419 0.3824 +-0.1664 0.3894 +-0.0909 0.3939 +-0.0154 0.3957 +0.0601 0.3949 +0.1356 0.3914 +0.2111 0.3852 +0.2866 0.3766 +0.3620 0.3657 +0.4375 0.3527 +0.5130 0.3379 +0.5885 0.3215 +0.6640 0.3038 +0.7395 0.2851 +0.8150 0.2657 +0.8905 0.2460 +0.9660 0.2262 +1.0415 0.2066 +1.1170 0.1874 +1.1925 0.1689 +1.2680 0.1511 +1.3435 0.1343 +1.4190 0.1186 +1.4945 0.1040 +1.5700 0.0905 +1.6455 0.0783 +1.7210 0.0673 +1.7965 0.0574 +1.8720 0.0486 +1.9475 0.0409 +2.0230 0.0342 +2.0985 0.0284 +2.1740 0.0234 +2.2495 0.0192 +2.3250 0.0156 +2.4005 0.0126 +2.4760 0.0101 +2.5515 0.0081 +2.6270 0.0064 +2.7025 0.0050 +2.7780 0.0039 +2.8535 0.0030 +2.9290 0.0023 +3.0045 0.0018 +3.0800 0.0014 +3.1555 0.0010 +3.2310 0.0008 +3.3065 0.0006 +3.3820 0.0004 +3.4575 0.0003 +3.5330 0.0002 +3.6085 0.0002 +3.6840 0.0001 +3.7595 0.0001 +3.8350 0.0001 +3.9105 0.0000 +3.9860 0.0000 +4.0615 0.0000 TraitB_T3 1 250 150 0 0 --3.8488 0.0003 --3.7734 0.0004 --3.6979 0.0005 --3.6224 0.0006 --3.5469 0.0008 --3.4714 0.0011 --3.3959 0.0014 --3.3205 0.0017 --3.2450 0.0022 --3.1695 0.0028 --3.0940 0.0036 --3.0185 0.0045 --2.9430 0.0056 --2.8676 0.0069 --2.7921 0.0085 --2.7166 0.0105 --2.6411 0.0128 --2.5656 0.0155 --2.4902 0.0187 --2.4147 0.0225 --2.3392 0.0268 --2.2637 0.0318 --2.1882 0.0375 --2.1127 0.0440 --2.0373 0.0513 --1.9618 0.0596 --1.8863 0.0687 --1.8108 0.0788 --1.7353 0.0899 --1.6598 0.1020 --1.5844 0.1151 --1.5089 0.1291 --1.4334 0.1440 --1.3579 0.1597 --1.2824 0.1762 --1.2070 0.1933 --1.1315 0.2108 --1.0560 0.2286 --0.9805 0.2466 --0.9050 0.2645 --0.8295 0.2821 --0.7541 0.2992 --0.6786 0.3155 --0.6031 0.3309 --0.5276 0.3451 --0.4521 0.3579 --0.3766 0.3691 --0.3012 0.3785 --0.2257 0.3860 --0.1502 0.3914 --0.0747 0.3947 -0.0008 0.3958 -0.0762 0.3946 -0.1517 0.3913 -0.2272 0.3858 -0.3027 0.3783 -0.3782 0.3689 -0.4537 0.3577 -0.5291 0.3448 -0.6046 0.3306 -0.6801 0.3152 -0.7556 0.2988 -0.8311 0.2817 -0.9066 0.2641 -0.9820 0.2462 -1.0575 0.2283 -1.1330 0.2104 -1.2085 0.1929 -1.2840 0.1758 -1.3595 0.1594 -1.4349 0.1437 -1.5104 0.1288 -1.5859 0.1148 -1.6614 0.1018 -1.7369 0.0897 -1.8123 0.0786 -1.8878 0.0685 -1.9633 0.0594 -2.0388 0.0512 -2.1143 0.0439 -2.1898 0.0374 -2.2652 0.0317 -2.3407 0.0267 -2.4162 0.0224 -2.4917 0.0186 -2.5672 0.0155 -2.6427 0.0127 -2.7181 0.0104 -2.7936 0.0085 -2.8691 0.0069 -2.9446 0.0056 -3.0201 0.0044 -3.0955 0.0035 -3.1710 0.0028 -3.2465 0.0022 -3.3220 0.0017 -3.3975 0.0014 -3.4730 0.0010 -3.5484 0.0008 -3.6239 0.0006 -3.6994 0.0005 +-3.6093 0.0003 +-3.5383 0.0004 +-3.4673 0.0005 +-3.3963 0.0006 +-3.3252 0.0008 +-3.2542 0.0011 +-3.1832 0.0014 +-3.1122 0.0017 +-3.0411 0.0022 +-2.9701 0.0028 +-2.8991 0.0036 +-2.8281 0.0045 +-2.7570 0.0056 +-2.6860 0.0069 +-2.6150 0.0085 +-2.5440 0.0105 +-2.4729 0.0128 +-2.4019 0.0155 +-2.3309 0.0187 +-2.2599 0.0225 +-2.1888 0.0268 +-2.1178 0.0318 +-2.0468 0.0375 +-1.9758 0.0440 +-1.9047 0.0513 +-1.8337 0.0596 +-1.7627 0.0687 +-1.6917 0.0788 +-1.6206 0.0899 +-1.5496 0.1020 +-1.4786 0.1151 +-1.4076 0.1291 +-1.3365 0.1440 +-1.2655 0.1597 +-1.1945 0.1762 +-1.1235 0.1933 +-1.0524 0.2108 +-0.9814 0.2286 +-0.9104 0.2466 +-0.8394 0.2645 +-0.7683 0.2821 +-0.6973 0.2992 +-0.6263 0.3155 +-0.5553 0.3309 +-0.4842 0.3451 +-0.4132 0.3579 +-0.3422 0.3691 +-0.2712 0.3785 +-0.2001 0.3860 +-0.1291 0.3914 +-0.0581 0.3947 +0.0129 0.3958 +0.0839 0.3946 +0.1550 0.3913 +0.2260 0.3858 +0.2970 0.3783 +0.3680 0.3689 +0.4391 0.3577 +0.5101 0.3448 +0.5811 0.3306 +0.6521 0.3152 +0.7232 0.2988 +0.7942 0.2817 +0.8652 0.2641 +0.9362 0.2462 +1.0073 0.2283 +1.0783 0.2104 +1.1493 0.1929 +1.2203 0.1758 +1.2914 0.1594 +1.3624 0.1437 +1.4334 0.1288 +1.5044 0.1148 +1.5755 0.1018 +1.6465 0.0897 +1.7175 0.0786 +1.7885 0.0685 +1.8596 0.0594 +1.9306 0.0512 +2.0016 0.0439 +2.0726 0.0374 +2.1437 0.0317 +2.2147 0.0267 +2.2857 0.0224 +2.3567 0.0186 +2.4278 0.0155 +2.4988 0.0127 +2.5698 0.0104 +2.6408 0.0085 +2.7119 0.0069 +2.7829 0.0056 +2.8539 0.0044 +2.9249 0.0035 +2.9960 0.0028 +3.0670 0.0022 +3.1380 0.0017 +3.2090 0.0014 +3.2801 0.0010 +3.3511 0.0008 +3.4221 0.0006 +3.4931 0.0005 TraitB_T1 1 250 150 0 0 --3.7153 0.0004 --3.6359 0.0006 --3.5565 0.0008 --3.4772 0.0010 --3.3978 0.0013 --3.3184 0.0018 --3.2390 0.0023 --3.1596 0.0029 --3.0802 0.0037 --3.0009 0.0047 --2.9215 0.0059 --2.8421 0.0074 --2.7627 0.0093 --2.6833 0.0114 --2.6039 0.0141 --2.5246 0.0172 --2.4452 0.0209 --2.3658 0.0252 --2.2864 0.0302 --2.2070 0.0360 --2.1277 0.0427 --2.0483 0.0502 --1.9689 0.0587 --1.8895 0.0683 --1.8101 0.0789 --1.7307 0.0906 --1.6514 0.1034 --1.5720 0.1173 --1.4926 0.1322 --1.4132 0.1481 --1.3338 0.1649 --1.2544 0.1824 --1.1751 0.2006 --1.0957 0.2192 --1.0163 0.2381 --0.9369 0.2570 --0.8575 0.2756 --0.7781 0.2938 --0.6988 0.3112 --0.6194 0.3277 --0.5400 0.3429 --0.4606 0.3565 --0.3812 0.3685 --0.3019 0.3784 --0.2225 0.3863 --0.1431 0.3918 --0.0637 0.3950 -0.0157 0.3957 -0.0951 0.3940 -0.1744 0.3899 -0.2538 0.3834 -0.3332 0.3747 -0.4126 0.3640 -0.4920 0.3513 -0.5714 0.3370 -0.6507 0.3213 -0.7301 0.3045 -0.8095 0.2867 -0.8889 0.2683 -0.9683 0.2495 -1.0477 0.2306 -1.1270 0.2118 -1.2064 0.1934 -1.2858 0.1754 -1.3652 0.1582 -1.4446 0.1417 -1.5239 0.1262 -1.6033 0.1117 -1.6827 0.0982 -1.7621 0.0859 -1.8415 0.0746 -1.9209 0.0644 -2.0002 0.0553 -2.0796 0.0471 -2.1590 0.0399 -2.2384 0.0336 -2.3178 0.0281 -2.3972 0.0234 -2.4765 0.0194 -2.5559 0.0159 -2.6353 0.0130 -2.7147 0.0105 -2.7941 0.0085 -2.8735 0.0068 -2.9528 0.0054 -3.0322 0.0043 -3.1116 0.0034 -3.1910 0.0026 -3.2704 0.0020 -3.3497 0.0016 -3.4291 0.0012 -3.5085 0.0009 -3.5879 0.0007 -3.6673 0.0005 -3.7467 0.0004 -3.8260 0.0003 -3.9054 0.0002 -3.9848 0.0002 -4.0642 0.0001 -4.1436 0.0001 -4.2230 0.0001 +-3.5085 0.0004 +-3.4347 0.0006 +-3.3609 0.0008 +-3.2872 0.0010 +-3.2134 0.0013 +-3.1397 0.0018 +-3.0659 0.0023 +-2.9921 0.0029 +-2.9184 0.0037 +-2.8446 0.0047 +-2.7709 0.0059 +-2.6971 0.0074 +-2.6234 0.0093 +-2.5496 0.0114 +-2.4758 0.0141 +-2.4021 0.0172 +-2.3283 0.0209 +-2.2546 0.0252 +-2.1808 0.0302 +-2.1070 0.0360 +-2.0333 0.0427 +-1.9595 0.0502 +-1.8858 0.0587 +-1.8120 0.0683 +-1.7382 0.0789 +-1.6645 0.0906 +-1.5907 0.1034 +-1.5170 0.1173 +-1.4432 0.1322 +-1.3694 0.1481 +-1.2957 0.1649 +-1.2219 0.1824 +-1.1482 0.2006 +-1.0744 0.2192 +-1.0006 0.2381 +-0.9269 0.2570 +-0.8531 0.2756 +-0.7794 0.2938 +-0.7056 0.3112 +-0.6319 0.3277 +-0.5581 0.3429 +-0.4843 0.3565 +-0.4106 0.3685 +-0.3368 0.3784 +-0.2631 0.3863 +-0.1893 0.3918 +-0.1155 0.3950 +-0.0418 0.3957 +0.0320 0.3940 +0.1057 0.3899 +0.1795 0.3834 +0.2533 0.3747 +0.3270 0.3640 +0.4008 0.3513 +0.4745 0.3370 +0.5483 0.3213 +0.6221 0.3045 +0.6958 0.2867 +0.7696 0.2683 +0.8433 0.2495 +0.9171 0.2306 +0.9909 0.2118 +1.0646 0.1934 +1.1384 0.1754 +1.2121 0.1582 +1.2859 0.1417 +1.3596 0.1262 +1.4334 0.1117 +1.5072 0.0982 +1.5809 0.0859 +1.6547 0.0746 +1.7284 0.0644 +1.8022 0.0553 +1.8760 0.0471 +1.9497 0.0399 +2.0235 0.0336 +2.0972 0.0281 +2.1710 0.0234 +2.2448 0.0194 +2.3185 0.0159 +2.3923 0.0130 +2.4660 0.0105 +2.5398 0.0085 +2.6136 0.0068 +2.6873 0.0054 +2.7611 0.0043 +2.8348 0.0034 +2.9086 0.0026 +2.9824 0.0020 +3.0561 0.0016 +3.1299 0.0012 +3.2036 0.0009 +3.2774 0.0007 +3.3511 0.0005 +3.4249 0.0004 +3.4987 0.0003 +3.5724 0.0002 +3.6462 0.0002 +3.7199 0.0001 +3.7937 0.0001 +3.8675 0.0001 Genotype 2 250 150 0 @@ -440,524 +440,524 @@ TraitA_T3 1 250 150 1 5 0 --3.6094 0.0007 --3.5392 0.0008 --3.4689 0.0011 --3.3987 0.0013 --3.3285 0.0017 --3.2582 0.0021 --3.1880 0.0027 --3.1177 0.0033 --3.0475 0.0041 --2.9773 0.0050 --2.9070 0.0062 --2.8368 0.0075 --2.7665 0.0092 --2.6963 0.0111 --2.6261 0.0133 --2.5558 0.0159 --2.4856 0.0189 --2.4154 0.0224 --2.3451 0.0264 --2.2749 0.0310 --2.2046 0.0362 --2.1344 0.0421 --2.0642 0.0486 --1.9939 0.0559 --1.9237 0.0641 --1.8534 0.0730 --1.7832 0.0828 --1.7130 0.0934 --1.6427 0.1049 --1.5725 0.1172 --1.5022 0.1304 --1.4320 0.1443 --1.3618 0.1589 --1.2915 0.1742 --1.2213 0.1900 --1.1510 0.2062 --1.0808 0.2227 --1.0106 0.2394 --0.9403 0.2561 --0.8701 0.2727 --0.7999 0.2889 --0.7296 0.3046 --0.6594 0.3195 --0.5891 0.3336 --0.5189 0.3467 --0.4487 0.3585 --0.3784 0.3688 --0.3082 0.3777 --0.2379 0.3849 --0.1677 0.3903 --0.0975 0.3939 --0.0272 0.3956 -0.0430 0.3954 -0.1133 0.3933 -0.1835 0.3893 -0.2537 0.3834 -0.3240 0.3759 -0.3942 0.3666 -0.4645 0.3559 -0.5347 0.3438 -0.6049 0.3306 -0.6752 0.3162 -0.7454 0.3011 -0.8156 0.2853 -0.8859 0.2690 -0.9561 0.2524 -1.0264 0.2357 -1.0966 0.2190 -1.1668 0.2025 -1.2371 0.1864 -1.3073 0.1707 -1.3776 0.1556 -1.4478 0.1411 -1.5180 0.1273 -1.5883 0.1144 -1.6585 0.1022 -1.7288 0.0909 -1.7990 0.0805 -1.8692 0.0709 -1.9395 0.0622 -2.0097 0.0542 -2.0799 0.0471 -2.1502 0.0407 -2.2204 0.0350 -2.2907 0.0299 -2.3609 0.0255 -2.4311 0.0216 -2.5014 0.0182 -2.5716 0.0153 -2.6419 0.0128 -2.7121 0.0106 -2.7823 0.0088 -2.8526 0.0072 -2.9228 0.0059 -2.9931 0.0048 -3.0633 0.0039 -3.1335 0.0032 -3.2038 0.0025 -3.2740 0.0020 -3.3443 0.0016 -3.4145 0.0013 +-4.3220 0.0007 +-4.2395 0.0008 +-4.1570 0.0011 +-4.0746 0.0013 +-3.9921 0.0017 +-3.9096 0.0021 +-3.8271 0.0027 +-3.7446 0.0033 +-3.6621 0.0041 +-3.5797 0.0050 +-3.4972 0.0062 +-3.4147 0.0075 +-3.3322 0.0092 +-3.2497 0.0111 +-3.1673 0.0133 +-3.0848 0.0159 +-3.0023 0.0189 +-2.9198 0.0224 +-2.8373 0.0264 +-2.7548 0.0310 +-2.6724 0.0362 +-2.5899 0.0421 +-2.5074 0.0486 +-2.4249 0.0559 +-2.3424 0.0641 +-2.2600 0.0730 +-2.1775 0.0828 +-2.0950 0.0934 +-2.0125 0.1049 +-1.9300 0.1172 +-1.8475 0.1304 +-1.7651 0.1443 +-1.6826 0.1589 +-1.6001 0.1742 +-1.5176 0.1900 +-1.4351 0.2062 +-1.3526 0.2227 +-1.2702 0.2394 +-1.1877 0.2561 +-1.1052 0.2727 +-1.0227 0.2889 +-0.9402 0.3046 +-0.8578 0.3195 +-0.7753 0.3336 +-0.6928 0.3467 +-0.6103 0.3585 +-0.5278 0.3688 +-0.4453 0.3777 +-0.3629 0.3849 +-0.2804 0.3903 +-0.1979 0.3939 +-0.1154 0.3956 +-0.0329 0.3954 +0.0495 0.3933 +0.1320 0.3893 +0.2145 0.3834 +0.2970 0.3759 +0.3795 0.3666 +0.4620 0.3559 +0.5444 0.3438 +0.6269 0.3306 +0.7094 0.3162 +0.7919 0.3011 +0.8744 0.2853 +0.9568 0.2690 +1.0393 0.2524 +1.1218 0.2357 +1.2043 0.2190 +1.2868 0.2025 +1.3693 0.1864 +1.4517 0.1707 +1.5342 0.1556 +1.6167 0.1411 +1.6992 0.1273 +1.7817 0.1144 +1.8642 0.1022 +1.9466 0.0909 +2.0291 0.0805 +2.1116 0.0709 +2.1941 0.0622 +2.2766 0.0542 +2.3590 0.0471 +2.4415 0.0407 +2.5240 0.0350 +2.6065 0.0299 +2.6890 0.0255 +2.7715 0.0216 +2.8539 0.0182 +2.9364 0.0153 +3.0189 0.0128 +3.1014 0.0106 +3.1839 0.0088 +3.2663 0.0072 +3.3488 0.0059 +3.4313 0.0048 +3.5138 0.0039 +3.5963 0.0032 +3.6788 0.0025 +3.7612 0.0020 +3.8437 0.0016 +3.9262 0.0013 TraitA_T2 1 250 150 1 5 0 --3.5730 0.0007 --3.5043 0.0009 --3.4357 0.0012 --3.3670 0.0015 --3.2984 0.0019 --3.2298 0.0023 --3.1611 0.0029 --3.0925 0.0036 --3.0239 0.0044 --2.9552 0.0054 --2.8866 0.0066 --2.8180 0.0079 --2.7493 0.0096 --2.6807 0.0115 --2.6121 0.0138 --2.5434 0.0164 --2.4748 0.0194 --2.4062 0.0229 --2.3375 0.0269 --2.2689 0.0314 --2.2003 0.0365 --2.1316 0.0423 --2.0630 0.0487 --1.9943 0.0559 --1.9257 0.0638 --1.8571 0.0725 --1.7884 0.0820 --1.7198 0.0923 --1.6512 0.1035 --1.5825 0.1154 --1.5139 0.1281 --1.4453 0.1416 --1.3766 0.1558 --1.3080 0.1705 --1.2394 0.1859 --1.1707 0.2016 --1.1021 0.2177 --1.0335 0.2340 --0.9648 0.2503 --0.8962 0.2666 --0.8276 0.2825 --0.7589 0.2981 --0.6903 0.3131 --0.6216 0.3272 --0.5530 0.3405 --0.4844 0.3526 --0.4157 0.3635 --0.3471 0.3730 --0.2785 0.3810 --0.2098 0.3873 --0.1412 0.3919 --0.0726 0.3948 --0.0039 0.3958 -0.0647 0.3950 -0.1333 0.3923 -0.2020 0.3879 -0.2706 0.3818 -0.3392 0.3740 -0.4079 0.3647 -0.4765 0.3539 -0.5451 0.3419 -0.6138 0.3288 -0.6824 0.3147 -0.7511 0.2998 -0.8197 0.2844 -0.8883 0.2684 -0.9570 0.2522 -1.0256 0.2359 -1.0942 0.2196 -1.1629 0.2034 -1.2315 0.1876 -1.3001 0.1723 -1.3688 0.1574 -1.4374 0.1432 -1.5060 0.1296 -1.5747 0.1168 -1.6433 0.1048 -1.7119 0.0936 -1.7806 0.0832 -1.8492 0.0736 -1.9178 0.0648 -1.9865 0.0568 -2.0551 0.0495 -2.1238 0.0430 -2.1924 0.0372 -2.2610 0.0320 -2.3297 0.0274 -2.3983 0.0233 -2.4669 0.0198 -2.5356 0.0167 -2.6042 0.0141 -2.6728 0.0118 -2.7415 0.0098 -2.8101 0.0081 -2.8787 0.0067 -2.9474 0.0055 -3.0160 0.0045 -3.0846 0.0037 -3.1533 0.0030 -3.2219 0.0024 -3.2905 0.0019 +-4.7209 0.0007 +-4.6314 0.0009 +-4.5418 0.0012 +-4.4523 0.0015 +-4.3628 0.0019 +-4.2733 0.0023 +-4.1838 0.0029 +-4.0943 0.0036 +-4.0048 0.0044 +-3.9153 0.0054 +-3.8258 0.0066 +-3.7362 0.0079 +-3.6467 0.0096 +-3.5572 0.0115 +-3.4677 0.0138 +-3.3782 0.0164 +-3.2887 0.0194 +-3.1992 0.0229 +-3.1097 0.0269 +-3.0201 0.0314 +-2.9306 0.0365 +-2.8411 0.0423 +-2.7516 0.0487 +-2.6621 0.0559 +-2.5726 0.0638 +-2.4831 0.0725 +-2.3936 0.0820 +-2.3041 0.0923 +-2.2145 0.1035 +-2.1250 0.1154 +-2.0355 0.1281 +-1.9460 0.1416 +-1.8565 0.1558 +-1.7670 0.1705 +-1.6775 0.1859 +-1.5880 0.2016 +-1.4985 0.2177 +-1.4089 0.2340 +-1.3194 0.2503 +-1.2299 0.2666 +-1.1404 0.2825 +-1.0509 0.2981 +-0.9614 0.3131 +-0.8719 0.3272 +-0.7824 0.3405 +-0.6929 0.3526 +-0.6033 0.3635 +-0.5138 0.3730 +-0.4243 0.3810 +-0.3348 0.3873 +-0.2453 0.3919 +-0.1558 0.3948 +-0.0663 0.3958 +0.0232 0.3950 +0.1127 0.3923 +0.2023 0.3879 +0.2918 0.3818 +0.3813 0.3740 +0.4708 0.3647 +0.5603 0.3539 +0.6498 0.3419 +0.7393 0.3288 +0.8288 0.3147 +0.9183 0.2998 +1.0079 0.2844 +1.0974 0.2684 +1.1869 0.2522 +1.2764 0.2359 +1.3659 0.2196 +1.4554 0.2034 +1.5449 0.1876 +1.6344 0.1723 +1.7239 0.1574 +1.8135 0.1432 +1.9030 0.1296 +1.9925 0.1168 +2.0820 0.1048 +2.1715 0.0936 +2.2610 0.0832 +2.3505 0.0736 +2.4400 0.0648 +2.5295 0.0568 +2.6191 0.0495 +2.7086 0.0430 +2.7981 0.0372 +2.8876 0.0320 +2.9771 0.0274 +3.0666 0.0233 +3.1561 0.0198 +3.2456 0.0167 +3.3352 0.0141 +3.4247 0.0118 +3.5142 0.0098 +3.6037 0.0081 +3.6932 0.0067 +3.7827 0.0055 +3.8722 0.0045 +3.9617 0.0037 +4.0512 0.0030 +4.1408 0.0024 +4.2303 0.0019 TraitA_T1 1 250 150 1 5 2 9 10 --4.4430 0.0000 --4.3666 0.0000 --4.2903 0.0000 --4.2139 0.0001 --4.1375 0.0001 --4.0611 0.0001 --3.9847 0.0002 --3.9083 0.0002 --3.8320 0.0003 --3.7556 0.0004 --3.6792 0.0005 --3.6028 0.0007 --3.5264 0.0009 --3.4500 0.0011 --3.3737 0.0015 --3.2973 0.0019 --3.2209 0.0024 --3.1445 0.0030 --3.0681 0.0039 --2.9918 0.0048 --2.9154 0.0060 --2.8390 0.0075 --2.7626 0.0093 --2.6862 0.0114 --2.6098 0.0139 --2.5335 0.0168 --2.4571 0.0203 --2.3807 0.0243 --2.3043 0.0290 --2.2279 0.0344 --2.1515 0.0406 --2.0752 0.0475 --1.9988 0.0554 --1.9224 0.0642 --1.8460 0.0740 --1.7696 0.0848 --1.6932 0.0965 --1.6169 0.1093 --1.5405 0.1231 --1.4641 0.1378 --1.3877 0.1534 --1.3113 0.1698 --1.2350 0.1869 --1.1586 0.2044 --1.0822 0.2224 --1.0058 0.2406 --0.9294 0.2587 --0.8530 0.2767 --0.7767 0.2941 --0.7003 0.3109 --0.6239 0.3268 --0.5475 0.3415 --0.4711 0.3548 --0.3947 0.3666 --0.3184 0.3765 --0.2420 0.3845 --0.1656 0.3905 --0.0892 0.3942 --0.0128 0.3957 -0.0636 0.3950 -0.1399 0.3920 -0.2163 0.3868 -0.2927 0.3794 -0.3691 0.3701 -0.4455 0.3590 -0.5218 0.3461 -0.5982 0.3319 -0.6746 0.3164 -0.7510 0.2999 -0.8274 0.2826 -0.9038 0.2648 -0.9801 0.2467 -1.0565 0.2285 -1.1329 0.2105 -1.2093 0.1927 -1.2857 0.1755 -1.3621 0.1588 -1.4384 0.1430 -1.5148 0.1280 -1.5912 0.1139 -1.6676 0.1007 -1.7440 0.0886 -1.8204 0.0775 -1.8967 0.0674 -1.9731 0.0583 -2.0495 0.0501 -2.1259 0.0428 -2.2023 0.0364 -2.2786 0.0307 -2.3550 0.0258 -2.4314 0.0216 -2.5078 0.0179 -2.5842 0.0148 -2.6606 0.0122 -2.7369 0.0099 -2.8133 0.0081 -2.8897 0.0065 -2.9661 0.0052 -3.0425 0.0042 -3.1189 0.0033 -3.1952 0.0026 +-5.7657 0.0000 +-5.6659 0.0000 +-5.5661 0.0000 +-5.4664 0.0001 +-5.3666 0.0001 +-5.2669 0.0001 +-5.1671 0.0002 +-5.0673 0.0002 +-4.9676 0.0003 +-4.8678 0.0004 +-4.7681 0.0005 +-4.6683 0.0007 +-4.5685 0.0009 +-4.4688 0.0011 +-4.3690 0.0015 +-4.2693 0.0019 +-4.1695 0.0024 +-4.0697 0.0030 +-3.9700 0.0039 +-3.8702 0.0048 +-3.7705 0.0060 +-3.6707 0.0075 +-3.5709 0.0093 +-3.4712 0.0114 +-3.3714 0.0139 +-3.2717 0.0168 +-3.1719 0.0203 +-3.0721 0.0243 +-2.9724 0.0290 +-2.8726 0.0344 +-2.7729 0.0406 +-2.6731 0.0475 +-2.5733 0.0554 +-2.4736 0.0642 +-2.3738 0.0740 +-2.2741 0.0848 +-2.1743 0.0965 +-2.0745 0.1093 +-1.9748 0.1231 +-1.8750 0.1378 +-1.7753 0.1534 +-1.6755 0.1698 +-1.5757 0.1869 +-1.4760 0.2044 +-1.3762 0.2224 +-1.2765 0.2406 +-1.1767 0.2587 +-1.0769 0.2767 +-0.9772 0.2941 +-0.8774 0.3109 +-0.7776 0.3268 +-0.6779 0.3415 +-0.5781 0.3548 +-0.4784 0.3666 +-0.3786 0.3765 +-0.2788 0.3845 +-0.1791 0.3905 +-0.0793 0.3942 +0.0204 0.3957 +0.1202 0.3950 +0.2200 0.3920 +0.3197 0.3868 +0.4195 0.3794 +0.5192 0.3701 +0.6190 0.3590 +0.7188 0.3461 +0.8185 0.3319 +0.9183 0.3164 +1.0180 0.2999 +1.1178 0.2826 +1.2176 0.2648 +1.3173 0.2467 +1.4171 0.2285 +1.5168 0.2105 +1.6166 0.1927 +1.7164 0.1755 +1.8161 0.1588 +1.9159 0.1430 +2.0156 0.1280 +2.1154 0.1139 +2.2152 0.1007 +2.3149 0.0886 +2.4147 0.0775 +2.5144 0.0674 +2.6142 0.0583 +2.7140 0.0501 +2.8137 0.0428 +2.9135 0.0364 +3.0132 0.0307 +3.1130 0.0258 +3.2128 0.0216 +3.3125 0.0179 +3.4123 0.0148 +3.5120 0.0122 +3.6118 0.0099 +3.7116 0.0081 +3.8113 0.0065 +3.9111 0.0052 +4.0108 0.0042 +4.1106 0.0033 +4.2104 0.0026 TraitB_T2 1 250 150 2 5 8 1 10 --3.6634 0.0006 --3.5878 0.0008 --3.5122 0.0010 --3.4365 0.0013 --3.3609 0.0017 --3.2853 0.0021 --3.2097 0.0027 --3.1340 0.0034 --3.0584 0.0043 --2.9828 0.0053 --2.9072 0.0066 --2.8315 0.0081 --2.7559 0.0100 --2.6803 0.0122 --2.6046 0.0148 --2.5290 0.0178 --2.4534 0.0214 --2.3778 0.0255 --2.3021 0.0302 --2.2265 0.0357 --2.1509 0.0419 --2.0753 0.0489 --1.9996 0.0568 --1.9240 0.0655 --1.8484 0.0752 --1.7727 0.0858 --1.6971 0.0975 --1.6215 0.1100 --1.5459 0.1235 --1.4702 0.1379 --1.3946 0.1532 --1.3190 0.1692 --1.2434 0.1858 --1.1677 0.2029 --1.0921 0.2204 --1.0165 0.2381 --0.9408 0.2557 --0.8652 0.2732 --0.7896 0.2902 --0.7140 0.3066 --0.6383 0.3222 --0.5627 0.3366 --0.4871 0.3498 --0.4115 0.3615 --0.3358 0.3715 --0.2602 0.3797 --0.1846 0.3859 --0.1089 0.3901 --0.0333 0.3921 -0.0423 0.3920 -0.1179 0.3897 -0.1936 0.3853 -0.2692 0.3788 -0.3448 0.3704 -0.4205 0.3602 -0.4961 0.3483 -0.5717 0.3350 -0.6473 0.3204 -0.7230 0.3047 -0.7986 0.2882 -0.8742 0.2711 -0.9498 0.2536 -1.0255 0.2359 -1.1011 0.2183 -1.1767 0.2008 -1.2524 0.1838 -1.3280 0.1672 -1.4036 0.1513 -1.4792 0.1362 -1.5549 0.1219 -1.6305 0.1085 -1.7061 0.0960 -1.7817 0.0845 -1.8574 0.0740 -1.9330 0.0644 -2.0086 0.0558 -2.0843 0.0480 -2.1599 0.0411 -2.2355 0.0350 -2.3111 0.0296 -2.3868 0.0250 -2.4624 0.0209 -2.5380 0.0174 -2.6136 0.0144 -2.6893 0.0119 -2.7649 0.0097 -2.8405 0.0079 -2.9162 0.0064 -2.9918 0.0052 -3.0674 0.0041 -3.1430 0.0033 -3.2187 0.0026 -3.2943 0.0021 -3.3699 0.0016 -3.4455 0.0013 -3.5212 0.0010 -3.5968 0.0008 -3.6724 0.0006 -3.7481 0.0004 -3.8237 0.0003 -3.8993 0.0003 +-3.7882 0.0006 +-3.7109 0.0008 +-3.6337 0.0010 +-3.5564 0.0013 +-3.4791 0.0017 +-3.4019 0.0021 +-3.3246 0.0027 +-3.2473 0.0034 +-3.1700 0.0043 +-3.0928 0.0053 +-3.0155 0.0066 +-2.9382 0.0081 +-2.8610 0.0100 +-2.7837 0.0122 +-2.7064 0.0148 +-2.6292 0.0178 +-2.5519 0.0214 +-2.4746 0.0255 +-2.3974 0.0302 +-2.3201 0.0357 +-2.2428 0.0419 +-2.1656 0.0489 +-2.0883 0.0568 +-2.0110 0.0655 +-1.9338 0.0752 +-1.8565 0.0858 +-1.7792 0.0975 +-1.7020 0.1100 +-1.6247 0.1235 +-1.5474 0.1379 +-1.4702 0.1532 +-1.3929 0.1692 +-1.3156 0.1858 +-1.2384 0.2029 +-1.1611 0.2204 +-1.0838 0.2381 +-1.0065 0.2557 +-0.9293 0.2732 +-0.8520 0.2902 +-0.7747 0.3066 +-0.6975 0.3222 +-0.6202 0.3366 +-0.5429 0.3498 +-0.4657 0.3615 +-0.3884 0.3715 +-0.3111 0.3797 +-0.2339 0.3859 +-0.1566 0.3901 +-0.0793 0.3921 +-0.0021 0.3920 +0.0752 0.3897 +0.1525 0.3853 +0.2297 0.3788 +0.3070 0.3704 +0.3843 0.3602 +0.4615 0.3483 +0.5388 0.3350 +0.6161 0.3204 +0.6933 0.3047 +0.7706 0.2882 +0.8479 0.2711 +0.9251 0.2536 +1.0024 0.2359 +1.0797 0.2183 +1.1569 0.2008 +1.2342 0.1838 +1.3115 0.1672 +1.3888 0.1513 +1.4660 0.1362 +1.5433 0.1219 +1.6206 0.1085 +1.6978 0.0960 +1.7751 0.0845 +1.8524 0.0740 +1.9296 0.0644 +2.0069 0.0558 +2.0842 0.0480 +2.1614 0.0411 +2.2387 0.0350 +2.3160 0.0296 +2.3932 0.0250 +2.4705 0.0209 +2.5478 0.0174 +2.6250 0.0144 +2.7023 0.0119 +2.7796 0.0097 +2.8568 0.0079 +2.9341 0.0064 +3.0114 0.0052 +3.0886 0.0041 +3.1659 0.0033 +3.2432 0.0026 +3.3204 0.0021 +3.3977 0.0016 +3.4750 0.0013 +3.5523 0.0010 +3.6295 0.0008 +3.7068 0.0006 +3.7841 0.0004 +3.8613 0.0003 +3.9386 0.0003 TraitC_T3 1 250 150 2 8 9 0 --4.6954 0.0000 --4.6103 0.0000 --4.5253 0.0000 --4.4402 0.0000 --4.3551 0.0000 --4.2701 0.0001 --4.1850 0.0001 --4.1000 0.0001 --4.0149 0.0002 --3.9298 0.0002 --3.8448 0.0003 --3.7597 0.0005 --3.6746 0.0006 --3.5896 0.0008 --3.5045 0.0011 --3.4195 0.0015 --3.3344 0.0019 --3.2493 0.0025 --3.1643 0.0033 --3.0792 0.0042 --2.9942 0.0054 --2.9091 0.0069 --2.8240 0.0087 --2.7390 0.0109 --2.6539 0.0135 --2.5688 0.0167 --2.4838 0.0205 --2.3987 0.0250 --2.3137 0.0303 --2.2286 0.0364 --2.1435 0.0435 --2.0585 0.0516 --1.9734 0.0608 --1.8884 0.0711 --1.8033 0.0826 --1.7182 0.0953 --1.6332 0.1091 --1.5481 0.1242 --1.4630 0.1403 --1.3780 0.1575 --1.2929 0.1755 --1.2079 0.1943 --1.1228 0.2136 --1.0377 0.2331 --0.9527 0.2527 --0.8676 0.2721 --0.7825 0.2910 --0.6975 0.3090 --0.6124 0.3259 --0.5274 0.3413 --0.4423 0.3550 --0.3572 0.3667 --0.2722 0.3762 --0.1871 0.3833 --0.1021 0.3878 --0.0170 0.3897 -0.0681 0.3889 -0.1531 0.3854 -0.2382 0.3793 -0.3233 0.3708 -0.4083 0.3599 -0.4934 0.3470 -0.5784 0.3322 -0.6635 0.3159 -0.7486 0.2983 -0.8336 0.2797 -0.9187 0.2605 -1.0038 0.2410 -1.0888 0.2214 -1.1739 0.2019 -1.2589 0.1829 -1.3440 0.1646 -1.4291 0.1471 -1.5141 0.1305 -1.5992 0.1150 -1.6842 0.1007 -1.7693 0.0875 -1.8544 0.0755 -1.9394 0.0648 -2.0245 0.0551 -2.1096 0.0466 -2.1946 0.0391 -2.2797 0.0326 -2.3647 0.0270 -2.4498 0.0222 -2.5349 0.0182 -2.6199 0.0147 -2.7050 0.0119 -2.7900 0.0095 -2.8751 0.0075 -2.9602 0.0060 -3.0452 0.0047 -3.1303 0.0036 -3.2154 0.0028 -3.3004 0.0022 -3.3855 0.0016 -3.4705 0.0012 -3.5556 0.0009 -3.6407 0.0007 -3.7257 0.0005 -3.8108 0.0004 +-4.7490 0.0000 +-4.6626 0.0000 +-4.5763 0.0000 +-4.4899 0.0000 +-4.4036 0.0000 +-4.3172 0.0001 +-4.2309 0.0001 +-4.1445 0.0001 +-4.0582 0.0002 +-3.9718 0.0002 +-3.8855 0.0003 +-3.7991 0.0005 +-3.7127 0.0006 +-3.6264 0.0008 +-3.5400 0.0011 +-3.4537 0.0015 +-3.3673 0.0019 +-3.2810 0.0025 +-3.1946 0.0033 +-3.1083 0.0042 +-3.0219 0.0054 +-2.9356 0.0069 +-2.8492 0.0087 +-2.7629 0.0109 +-2.6765 0.0135 +-2.5901 0.0167 +-2.5038 0.0205 +-2.4174 0.0250 +-2.3311 0.0303 +-2.2447 0.0364 +-2.1584 0.0435 +-2.0720 0.0516 +-1.9857 0.0608 +-1.8993 0.0711 +-1.8130 0.0826 +-1.7266 0.0953 +-1.6403 0.1091 +-1.5539 0.1242 +-1.4675 0.1403 +-1.3812 0.1575 +-1.2948 0.1755 +-1.2085 0.1943 +-1.1221 0.2136 +-1.0358 0.2331 +-0.9494 0.2527 +-0.8631 0.2721 +-0.7767 0.2910 +-0.6904 0.3090 +-0.6040 0.3259 +-0.5177 0.3413 +-0.4313 0.3550 +-0.3449 0.3667 +-0.2586 0.3762 +-0.1722 0.3833 +-0.0859 0.3878 +0.0005 0.3897 +0.0868 0.3889 +0.1732 0.3854 +0.2595 0.3793 +0.3459 0.3708 +0.4322 0.3599 +0.5186 0.3470 +0.6049 0.3322 +0.6913 0.3159 +0.7777 0.2983 +0.8640 0.2797 +0.9504 0.2605 +1.0367 0.2410 +1.1231 0.2214 +1.2094 0.2019 +1.2958 0.1829 +1.3821 0.1646 +1.4685 0.1471 +1.5548 0.1305 +1.6412 0.1150 +1.7275 0.1007 +1.8139 0.0875 +1.9003 0.0755 +1.9866 0.0648 +2.0730 0.0551 +2.1593 0.0466 +2.2457 0.0391 +2.3320 0.0326 +2.4184 0.0270 +2.5047 0.0222 +2.5911 0.0182 +2.6774 0.0147 +2.7638 0.0119 +2.8501 0.0095 +2.9365 0.0075 +3.0229 0.0060 +3.1092 0.0047 +3.1956 0.0036 +3.2819 0.0028 +3.3683 0.0022 +3.4546 0.0016 +3.5410 0.0012 +3.6273 0.0009 +3.7137 0.0007 +3.8000 0.0005 +3.8864 0.0004 diff --git a/sourcecodes/data/example_time_series/TEbparameters.txt b/sourcecodes/data/example_time_series/TEbparameters.txt new file mode 100644 index 00000000..14ddb1ac --- /dev/null +++ b/sourcecodes/data/example_time_series/TEbparameters.txt @@ -0,0 +1,41 @@ +Genotype +Discrete node with 2 states +1 0.5380 +2 0.4620 + +TraitA_T1 +Continuous node +0.0372 1.3165 + +TraitA_T2 +Continuous node +-0.0611 1.3146 + +TraitA_T3 +Continuous node +-0.0834 1.1837 + +TraitB_T1 +Continuous node +-0.0563 0.9366 + +TraitB_T2 +Continuous node +-0.0453 1.0389 + +TraitB_T3 +Continuous node +0.0122 0.9485 + +TraitC_T1 +Continuous node +-0.0016 0.9150 + +TraitC_T2 +Continuous node +0.0917 0.9311 + +TraitC_T3 +Continuous node +0.0177 1.0392 + diff --git a/sourcecodes/data/examplecar15node/MtXmap.txt b/sourcecodes/data/examplecar15node/MtXmap.txt index af7330d6..8099a6e7 100644 --- a/sourcecodes/data/examplecar15node/MtXmap.txt +++ b/sourcecodes/data/examplecar15node/MtXmap.txt @@ -1,15 +1,15 @@ -Voltage_at_plug 2 0.827795 2.021000 -Car_cranks 2 0.500234 1.504000 -Spark_plugs 2 0.820310 2.042000 -Spark_quality 2 0.816376 2.014000 -Distributer 3 0.500241 1.497000 -Spark_timing 2 0.810222 2.014000 -Car_starts 2 0.500054 1.486000 -Headlights 3 0.810946 2.032000 -Alternator 3 0.500214 1.494000 -Charging_system 2 0.500234 1.496000 -Battery_voltage 3 0.806400 2.037000 -Battery_age 3 0.561294 1.708000 -Main_fuse 3 0.500150 1.490000 -Starter_system 3 0.499674 1.476000 -Starter_motor 2 0.500201 1.493000 +Voltage_at_plug 0.827795 2.021000 +Car_cranks 0.500234 1.504000 +Spark_plugs 0.820310 2.042000 +Spark_quality 0.816376 2.014000 +Distributer 0.500241 1.497000 +Spark_timing 0.810222 2.014000 +Car_starts 0.500054 1.486000 +Headlights 0.810946 2.032000 +Alternator 0.500214 1.494000 +Charging_system 0.500234 1.496000 +Battery_voltage 0.806400 2.037000 +Battery_age 0.561294 1.708000 +Main_fuse 0.500150 1.490000 +Starter_system 0.499674 1.476000 +Starter_motor 0.500201 1.493000 diff --git a/sourcecodes/data/examplecar15node/eIAmap.txt b/sourcecodes/data/examplecar15node/eIAmap.txt index e96a904a..9f705391 100644 --- a/sourcecodes/data/examplecar15node/eIAmap.txt +++ b/sourcecodes/data/examplecar15node/eIAmap.txt @@ -1,15 +1,15 @@ -Voltage_at_plug 2 0.908185 1.905000 -Car_cranks 2 0.500106 1.488000 -Spark_plugs 2 0.778947 2.543000 -Spark_quality 2 0.853627 1.757000 -Distributer 3 0.099549 1.990000 -Spark_timing 2 0.357390 2.880000 -Car_starts 2 0.469352 1.327000 -Headlights 3 0.917301 1.951000 -Alternator 3 0.044699 1.998000 -Charging_system 2 0.500246 1.502000 -Battery_voltage 3 0.915330 2.003000 -Battery_age 3 0.500554 1.236000 -Main_fuse 3 0.121613 1.985000 -Starter_system 3 0.494126 1.578000 -Starter_motor 2 0.063151 1.996000 +Voltage_at_plug 0.908185 1.905000 +Car_cranks 0.500106 1.488000 +Spark_plugs 0.778947 2.543000 +Spark_quality 0.853627 1.757000 +Distributer 0.099549 1.990000 +Spark_timing 0.357390 2.880000 +Car_starts 0.469352 1.327000 +Headlights 0.917301 1.951000 +Alternator 0.044699 1.998000 +Charging_system 0.500246 1.502000 +Battery_voltage 0.915330 2.003000 +Battery_age 0.500554 1.236000 +Main_fuse 0.121613 1.985000 +Starter_system 0.494126 1.578000 +Starter_motor 0.063151 1.996000 diff --git a/sourcecodes/data/examplecar15node/eIAparameters.txt b/sourcecodes/data/examplecar15node/eIAparameters.txt new file mode 100644 index 00000000..57373374 --- /dev/null +++ b/sourcecodes/data/examplecar15node/eIAparameters.txt @@ -0,0 +1,82 @@ +Voltage_at_plug +Discrete node with 3 states +1 0.4646 +2 0.1681 +3 0.3674 + +Car_cranks +Discrete node with 2 states +1 0.5109 +2 0.4891 + +Spark_plugs +Discrete node with 3 states +1 0.1791 +2 0.0990 +3 0.7219 + +Spark_quality +Discrete node with 3 states +1 0.5114 +2 0.2233 +3 0.2652 + +Distributer +Discrete node with 2 states +1 0.0098 +2 0.9902 + +Spark_timing +Discrete node with 3 states +1 0.0088 +2 0.0982 +3 0.8930 + +Car_starts +Discrete node with 2 states +1 0.7903 +2 0.2097 + +Headlights +Discrete node with 3 states +1 0.4470 +2 0.1573 +3 0.3957 + +Alternator +Discrete node with 2 states +1 0.0020 +2 0.9980 + +Charging_system +Discrete node with 2 states +1 0.4988 +2 0.5012 + +Battery_voltage +Discrete node with 3 states +1 0.4181 +2 0.1633 +3 0.4186 + +Battery_age +Discrete node with 3 states +1 0.7989 +2 0.1661 +3 0.0350 + +Main_fuse +Discrete node with 2 states +1 0.0149 +2 0.9851 + +Starter_system +Discrete node with 2 states +1 0.4211 +2 0.5789 + +Starter_motor +Discrete node with 2 states +1 0.0039 +2 0.9961 + diff --git a/sourcecodes/data/old/example_sci_bk/Lluban.txt b/sourcecodes/data/old/example_sci_bk/Lluban.txt new file mode 100644 index 00000000..38108f00 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Lluban.txt @@ -0,0 +1,15 @@ +From To +Gene1 Genotype +Gene2 Genotype +Gene3 Genotype +Phenotype Genotype +Gene1 Genotype +Gene2 Genotype +Gene3 Genotype +Phenotype Gene1 +Phenotype Gene2 +Phenotype Gene3 +Phenotype Genotype +Phenotype Gene1 +Phenotype Gene2 +Phenotype Gene3 diff --git a/sourcecodes/data/old/example_sci_bk/Llucontinuous_input.txt b/sourcecodes/data/old/example_sci_bk/Llucontinuous_input.txt new file mode 100644 index 00000000..79295d7e --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llucontinuous_input.txt @@ -0,0 +1,503 @@ +Genotype Gene3 Gene2 Phenotype Gene1 +2 1 1 1 1 +2 -1.0008 -0.44837 0.21808 -1.196 +1 -0.29368 -0.53043 -1.0893 -0.10136 +2 0.70835 0.72886 -0.18098 -0.42907 +1 0.63703 0.86428 1.7013 0.1425 +1 -1.2402 -0.69712 -1.7002 -0.71634 +1 -1.1952 0.27155 -0.79413 -1.0965 +2 0.62914 0.94265 1.8385 0.6135 +1 -1.91 -2.379 -3.1094 -1.0924 +2 -0.83436 -0.90968 -1.3598 1.335 +1 0.15685 0.4766 1.2891 -1.3309 +2 0.7047 1.0623 1.9811 1.2821 +1 0.59747 -0.023123 0.88555 -0.8844 +1 -1.0557 -1.5548 -1.3016 -0.77687 +2 1.5206 2.0289 0.90366 1.8089 +1 0.65525 -0.47226 -1.1824 0.41863 +2 -0.39262 0.382 -0.64829 0.40947 +2 0.14966 0.22972 0.33797 0.69647 +1 -1.8836 -0.68534 -0.99941 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b/sourcecodes/data/old/example_sci_bk/Llugraphviz.txt new file mode 100644 index 00000000..88bbd3ba --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llugraphviz.txt @@ -0,0 +1,10 @@ +digraph G { +size="10,10"; ratio = fill; +node [shape=square,width=1.5]; +Genotype -> Gene3; +Genotype -> Gene1; +Gene3 -> Phenotype; +Gene2 -> Gene3; +Gene2 -> Phenotype; +Gene1 -> Gene2; +} \ No newline at end of file diff --git a/sourcecodes/data/old/example_sci_bk/Lluk.txt b/sourcecodes/data/old/example_sci_bk/Lluk.txt new file mode 100644 index 00000000..83b33d23 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Lluk.txt @@ -0,0 +1 @@ +1000 diff --git a/sourcecodes/data/old/example_sci_bk/Llumap.txt b/sourcecodes/data/old/example_sci_bk/Llumap.txt new file mode 100644 index 00000000..958281d5 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llumap.txt @@ -0,0 +1,5 @@ +Genotype 2 0.500305 1.514000 +Gene3 1 1.027261 -0.015284 +Gene2 1 1.160583 0.138097 +Phenotype 1 1.554104 0.069005 +Gene1 1 1.515414 0.174451 diff --git a/sourcecodes/data/old/example_sci_bk/Llumapdata.txt b/sourcecodes/data/old/example_sci_bk/Llumapdata.txt new file mode 100644 index 00000000..d684ea06 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llumapdata.txt @@ -0,0 +1 @@ +Genotype Gene1 Gene2 Gene3 Phenotype diff --git a/sourcecodes/data/old/example_sci_bk/Lluname.txt b/sourcecodes/data/old/example_sci_bk/Lluname.txt new file mode 100644 index 00000000..f3a1f5bf --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Lluname.txt @@ -0,0 +1 @@ +Genotype Gene3 Gene2 Phenotype Gene1 diff --git a/sourcecodes/data/old/example_sci_bk/Llunet_figure.txt b/sourcecodes/data/old/example_sci_bk/Llunet_figure.txt new file mode 100644 index 00000000..bdc07cbd --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llunet_figure.txt @@ -0,0 +1,433 @@ +5 +1200 1200 +Genotype 0 0 +Gene1 120 200 +Gene2 0 400 +Gene3 120 600 +Phenotype 0 800 +Genotype 2 +250 150 +0 +2 2 4 +1 0.4860 +2 0.5140 +Gene1 1 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0.5525 +-0.9284 0.5908 +-0.8546 0.6224 +-0.7808 0.6458 +-0.7069 0.6600 +-0.6331 0.6644 +-0.5593 0.6588 +-0.4855 0.6434 +-0.4116 0.6190 +-0.3378 0.5866 +-0.2640 0.5475 +-0.1901 0.5034 +-0.1163 0.4558 +-0.0425 0.4066 +0.0313 0.3573 +0.1052 0.3092 +0.1790 0.2636 +0.2528 0.2213 +0.3266 0.1830 +0.4005 0.1491 +0.4743 0.1197 +0.5481 0.0946 +0.6220 0.0736 +0.6958 0.0565 +0.7696 0.0426 +0.8434 0.0317 +0.9173 0.0233 +0.9911 0.0168 +1.0649 0.0119 +1.1387 0.0084 +1.2126 0.0058 +1.2864 0.0039 +1.3602 0.0026 +1.4341 0.0017 +1.5079 0.0011 +1.5817 0.0007 +1.6555 0.0005 +1.7294 0.0003 +1.8032 0.0002 +1.8770 0.0001 +1.9508 0.0001 +2.0247 0.0000 +2.0985 0.0000 +2.1723 0.0000 +2.2462 0.0000 +2.3200 0.0000 +2.3938 0.0000 +2.4676 0.0000 +2.5415 0.0000 +2.6153 0.0000 +2.6891 0.0000 +2.7629 0.0000 +2.8368 0.0000 +2.9106 0.0000 +2.9844 0.0000 +3.0583 0.0000 +3.1321 0.0000 +3.2059 0.0000 +3.2797 0.0000 +3.3536 0.0000 +3.4274 0.0000 +3.5012 0.0000 +3.5750 0.0000 +3.6489 0.0000 +3.7227 0.0000 +3.7965 0.0000 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+-1.7894 0.1381 +-1.7125 0.1597 +-1.6356 0.1831 +-1.5588 0.2081 +-1.4819 0.2343 +-1.4050 0.2615 +-1.3282 0.2893 +-1.2513 0.3173 +-1.1744 0.3448 +-1.0975 0.3714 +-1.0207 0.3966 +-0.9438 0.4197 +-0.8669 0.4402 +-0.7901 0.4576 +-0.7132 0.4716 +-0.6363 0.4816 +-0.5594 0.4875 +-0.4826 0.4891 +-0.4057 0.4864 +-0.3288 0.4794 +-0.2520 0.4684 +-0.1751 0.4535 +-0.0982 0.4353 +-0.0213 0.4140 +0.0555 0.3904 +0.1324 0.3648 +0.2093 0.3379 +0.2861 0.3102 +0.3630 0.2822 +0.4399 0.2545 +0.5168 0.2275 +0.5936 0.2016 +0.6705 0.1770 +0.7474 0.1541 +0.8242 0.1329 +0.9011 0.1136 +0.9780 0.0963 +1.0549 0.0809 +1.1317 0.0673 +1.2086 0.0556 +1.2855 0.0455 +1.3623 0.0368 +1.4392 0.0296 +1.5161 0.0236 +1.5930 0.0186 +1.6698 0.0146 +1.7467 0.0113 +1.8236 0.0087 +1.9004 0.0066 +1.9773 0.0050 +2.0542 0.0037 +2.1311 0.0028 +2.2079 0.0020 +2.2848 0.0015 +2.3617 0.0011 +2.4385 0.0008 +2.5154 0.0005 +2.5923 0.0004 +2.6692 0.0003 +2.7460 0.0002 +2.8229 0.0001 +2.8998 0.0001 +2.9766 0.0001 +3.0535 0.0000 +3.1304 0.0000 +3.2073 0.0000 +3.2841 0.0000 +3.3610 0.0000 +3.4379 0.0000 +3.5147 0.0000 +3.5916 0.0000 +3.6685 0.0000 +3.7454 0.0000 +3.8222 0.0000 +3.8991 0.0000 +3.9760 0.0000 +4.0528 0.0000 +4.1297 0.0000 diff --git a/sourcecodes/data/old/example_sci_bk/Llunlevels.txt b/sourcecodes/data/old/example_sci_bk/Llunlevels.txt new file mode 100644 index 00000000..714e56bd --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llunlevels.txt @@ -0,0 +1,2 @@ +Genotype 1 2 + diff --git a/sourcecodes/data/old/example_sci_bk/Llunnode.txt b/sourcecodes/data/old/example_sci_bk/Llunnode.txt new file mode 100644 index 00000000..7ed6ff82 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llunnode.txt @@ -0,0 +1 @@ +5 diff --git a/sourcecodes/data/old/example_sci_bk/Llunrows.txt b/sourcecodes/data/old/example_sci_bk/Llunrows.txt new file mode 100644 index 00000000..c15fb720 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llunrows.txt @@ -0,0 +1 @@ +501 diff --git a/sourcecodes/data/old/example_sci_bk/Lluparent.txt b/sourcecodes/data/old/example_sci_bk/Lluparent.txt new file mode 100644 index 00000000..b8626c4c --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Lluparent.txt @@ -0,0 +1 @@ +4 diff --git a/sourcecodes/data/old/example_sci_bk/Llustructure_input.txt b/sourcecodes/data/old/example_sci_bk/Llustructure_input.txt new file mode 100644 index 00000000..bcf72d97 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llustructure_input.txt @@ -0,0 +1,6 @@ +Genotype Gene3 Gene2 Phenotype Gene1 +0 1 0 0 1 +0 0 0 1 0 +0 1 0 1 0 +0 0 0 0 0 +0 0 1 0 0 diff --git a/sourcecodes/data/old/example_sci_bk/Llustructure_input_temp.txt b/sourcecodes/data/old/example_sci_bk/Llustructure_input_temp.txt new file mode 100644 index 00000000..95aa7a5d --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llustructure_input_temp.txt @@ -0,0 +1,6 @@ +Genotype Gene3 Gene2 Phenotype Gene1 +0.000000 0.999929 0.183248 0.000431 1.000000 +0.000000 0.000000 0.000000 1.000000 0.000000 +0.000000 0.935752 0.000000 1.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.053385 0.881001 0.156255 0.000000 diff --git a/sourcecodes/data/old/example_sci_bk/Llustructure_old.txt b/sourcecodes/data/old/example_sci_bk/Llustructure_old.txt new file mode 100644 index 00000000..5b464577 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llustructure_old.txt @@ -0,0 +1,5 @@ +Genotype 0.4860 0.5140 +Gene3 0.0001 0.0001 0.0001 0.0001 0.0002 0.0002 0.0003 0.0004 0.0006 0.0008 0.0010 0.0013 0.0018 0.0023 0.0029 0.0037 0.0047 0.0059 0.0074 0.0092 0.0113 0.0139 0.0170 0.0206 0.0248 0.0297 0.0354 0.0419 0.0493 0.0576 0.0669 0.0773 0.0887 0.1012 0.1147 0.1292 0.1447 0.1610 0.1781 0.1958 0.2139 0.2323 0.2507 0.2688 0.2866 0.3036 0.3197 0.3345 0.3479 0.3597 0.3695 0.3773 0.3828 0.3861 0.3870 0.3855 0.3817 0.3756 0.3673 0.3570 0.3449 0.3311 0.3160 0.2996 0.2824 0.2645 0.2463 0.2279 0.2095 0.1915 0.1740 0.1570 0.1409 0.1256 0.1114 0.0981 0.0859 0.0747 0.0646 0.0555 0.0474 0.0402 0.0340 0.0285 0.0237 0.0197 0.0162 0.0132 0.0108 0.0087 0.0070 0.0056 0.0044 0.0035 0.0027 0.0021 0.0016 0.0013 0.0010 0.0007 0.0006 +Gene1 0.0009 0.0012 0.0015 0.0019 0.0024 0.0030 0.0037 0.0046 0.0056 0.0069 0.0083 0.0101 0.0121 0.0145 0.0174 0.0206 0.0243 0.0286 0.0335 0.0389 0.0451 0.0520 0.0597 0.0682 0.0775 0.0876 0.0986 0.1105 0.1231 0.1366 0.1508 0.1657 0.1811 0.1971 0.2134 0.2300 0.2467 0.2633 0.2797 0.2956 0.3110 0.3256 0.3392 0.3517 0.3629 0.3726 0.3808 0.3873 0.3920 0.3948 0.3958 0.3948 0.3920 0.3872 0.3807 0.3726 0.3628 0.3516 0.3391 0.3254 0.3108 0.2955 0.2795 0.2631 0.2465 0.2299 0.2133 0.1969 0.1810 0.1655 0.1507 0.1365 0.1230 0.1103 0.0985 0.0875 0.0774 0.0681 0.0596 0.0520 0.0451 0.0389 0.0334 0.0286 0.0243 0.0206 0.0173 0.0145 0.0121 0.0101 0.0083 0.0068 0.0056 0.0046 0.0037 0.0030 0.0024 0.0019 0.0015 0.0012 0.0009 +Phenotype 0.0010 0.0013 0.0016 0.0021 0.0026 0.0033 0.0042 0.0052 0.0065 0.0080 0.0098 0.0120 0.0146 0.0176 0.0212 0.0253 0.0300 0.0354 0.0416 0.0486 0.0564 0.0651 0.0748 0.0854 0.0970 0.1096 0.1230 0.1374 0.1526 0.1685 0.1850 0.2021 0.2195 0.2370 0.2545 0.2718 0.2887 0.3049 0.3202 0.3344 0.3473 0.3587 0.3684 0.3763 0.3822 0.3860 0.3877 0.3872 0.3846 0.3798 0.3731 0.3644 0.3539 0.3418 0.3283 0.3136 0.2979 0.2813 0.2643 0.2468 0.2293 0.2118 0.1945 0.1777 0.1614 0.1458 0.1310 0.1170 0.1039 0.0918 0.0806 0.0704 0.0612 0.0529 0.0454 0.0388 0.0329 0.0278 0.0234 0.0195 0.0162 0.0134 0.0110 0.0090 0.0073 0.0059 0.0047 0.0038 0.0030 0.0024 0.0019 0.0015 0.0011 0.0009 0.0007 0.0005 0.0004 0.0003 0.0002 0.0002 0.0001 +Gene2 0.0008 0.0010 0.0013 0.0016 0.0020 0.0026 0.0032 0.0041 0.0050 0.0062 0.0077 0.0094 0.0114 0.0138 0.0166 0.0199 0.0237 0.0281 0.0331 0.0388 0.0453 0.0526 0.0607 0.0696 0.0795 0.0903 0.1021 0.1147 0.1282 0.1426 0.1578 0.1736 0.1900 0.2069 0.2241 0.2414 0.2587 0.2758 0.2924 0.3084 0.3236 0.3377 0.3506 0.3621 0.3719 0.3800 0.3863 0.3905 0.3927 0.3929 0.3910 0.3870 0.3811 0.3732 0.3636 0.3524 0.3397 0.3258 0.3108 0.2949 0.2783 0.2613 0.2440 0.2267 0.2095 0.1925 0.1760 0.1601 0.1449 0.1304 0.1167 0.1039 0.0920 0.0811 0.0711 0.0620 0.0537 0.0464 0.0398 0.0340 0.0288 0.0243 0.0205 0.0171 0.0142 0.0117 0.0097 0.0079 0.0064 0.0052 0.0042 0.0034 0.0027 0.0021 0.0017 0.0013 0.0010 0.0008 0.0006 0.0005 0.0004 diff --git a/sourcecodes/data/old/example_sci_bk/Lluthr.txt b/sourcecodes/data/old/example_sci_bk/Lluthr.txt new file mode 100644 index 00000000..2eb3c4fe --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Lluthr.txt @@ -0,0 +1 @@ +0.5 diff --git a/sourcecodes/data/old/example_sci_bk/Llutier.txt b/sourcecodes/data/old/example_sci_bk/Llutier.txt new file mode 100644 index 00000000..da7084fb --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llutier.txt @@ -0,0 +1 @@ +3,Tier1,1,Genotype,Tier2,3,Gene1,Gene2,Gene3,Tier3,1,Phenotype, \ No newline at end of file diff --git a/sourcecodes/data/old/example_sci_bk/Llutype.txt b/sourcecodes/data/old/example_sci_bk/Llutype.txt new file mode 100644 index 00000000..9ea66ce4 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Llutype.txt @@ -0,0 +1,2 @@ +Genotype Gene3 Gene2 Phenotype Gene1 +2 1 1 1 1 diff --git a/sourcecodes/data/old/example_sci_bk/Lluvar.txt b/sourcecodes/data/old/example_sci_bk/Lluvar.txt new file mode 100644 index 00000000..56a6051c --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Lluvar.txt @@ -0,0 +1 @@ +1 \ No newline at end of file diff --git a/sourcecodes/data/old/example_sci_bk/Lluvardata.txt b/sourcecodes/data/old/example_sci_bk/Lluvardata.txt new file mode 100644 index 00000000..56a6051c --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Lluvardata.txt @@ -0,0 +1 @@ +1 \ No newline at end of file diff --git a/sourcecodes/data/old/example_sci_bk/Lluvarname.txt b/sourcecodes/data/old/example_sci_bk/Lluvarname.txt new file mode 100644 index 00000000..3fe283bd --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Lluvarname.txt @@ -0,0 +1 @@ +Genotype \ No newline at end of file diff --git a/sourcecodes/data/old/example_sci_bk/Lluwhite.txt b/sourcecodes/data/old/example_sci_bk/Lluwhite.txt new file mode 100644 index 00000000..83e81b8b --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/Lluwhite.txt @@ -0,0 +1 @@ +From To diff --git a/sourcecodes/data/old/example_sci_bk/old/Llurun_evidencemodified.sh b/sourcecodes/data/old/example_sci_bk/old/Llurun_evidencemodified.sh new file mode 100644 index 00000000..ee0dde13 --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/old/Llurun_evidencemodified.sh @@ -0,0 +1,38 @@ +#!/bin/sh +# script for execution of deployed applications +# +# Sets up the MCR environment for the current $ARCH and executes +# the specified command. +# +exe_name=$0 +exe_dir=`dirname "$0"` +echo "------------------------------------------" +if [ "x$1" = "x" ]; then + echo Usage: + echo $0 \<deployedMCRroot\> args +else + echo Setting up environment variables + MCRROOT="$1" + echo --- + LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; + MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; + XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; + export LD_LIBRARY_PATH; + export XAPPLRESDIR; + echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; + shift 1 + args= + while [ $# -gt 0 ]; do + token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank + args="${args} ${token}" + shift + done + "${exe_dir}"/evidencemodified Llu +fi +exit diff --git a/sourcecodes/data/old/example_sci_bk/old/Llurun_initialstructure.sh b/sourcecodes/data/old/example_sci_bk/old/Llurun_initialstructure.sh new file mode 100644 index 00000000..adde14dd --- /dev/null +++ b/sourcecodes/data/old/example_sci_bk/old/Llurun_initialstructure.sh @@ -0,0 +1,38 @@ +#!/bin/sh +# script for execution of deployed applications +# +# Sets up the MCR environment for the current $ARCH and executes +# the specified command. +# +exe_name=$0 +exe_dir=`dirname "$0"` +echo "------------------------------------------" +if [ "x$1" = "x" ]; then + echo Usage: + echo $0 \<deployedMCRroot\> args +else + echo Setting up environment variables + MCRROOT="$1" + echo --- + LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; + MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; + XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; + export LD_LIBRARY_PATH; + export XAPPLRESDIR; + echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; + shift 1 + args= + while [ $# -gt 0 ]; do + token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank + args="${args} ${token}" + shift + done + "${exe_dir}"/initialstructure Llu +fi +exit diff --git a/sourcecodes/data/old/examplecar/OVIban.txt b/sourcecodes/data/old/examplecar/OVIban.txt new file mode 100644 index 00000000..83e81b8b --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIban.txt @@ -0,0 +1 @@ +From To diff --git a/sourcecodes/data/old/examplecar/OVIcontinuous_input.txt b/sourcecodes/data/old/examplecar/OVIcontinuous_input.txt new file mode 100644 index 00000000..3a2846cf --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIcontinuous_input.txt @@ -0,0 +1,1004 @@ +Starts Dist SpkQual MFuse Alter Starter StMotor BatAge Charging PlugVolt BatVolt Timing Cranks Plugs AirFilter Air Fuel GasTank GasFilter +2 2 2 2 2 2 2 1 2 3 3 2 2 3 2 2 2 2 2 +2 2 2 2 2 2 2 1 2 3 3 2 2 3 2 2 2 2 2 +1 1 1 1 1 1 1 1.09219 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 8.35719 1 3 3 1 2 1 1 1 2 1 1 +2 1 1 1 1 2 1 4.87697 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 3.40886 2 3 3 1 2 1 1 1 2 1 1 +1 1 1 1 1 1 1 0.823531 1 1 1 1 1 1 1 1 2 1 1 +1 1 1 1 1 1 1 1.29151 1 1 1 1 1 1 1 1 1 1 1 +2 1 1 1 1 1 1 3.2245 1 1 1 1 2 1 1 1 2 1 1 +2 2 2 1 1 2 1 3.32396 1 3 1 2 2 2 1 2 1 1 1 +2 1 2 1 1 2 1 4.81455 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 1.8855 2 2 2 2 1 1 2 2 1 1 1 +2 1 2 1 1 2 1 3.16074 2 3 3 1 2 1 1 1 1 1 1 +2 1 1 1 1 1 1 1.32025 1 1 1 2 1 1 1 2 1 1 1 +2 1 1 1 1 1 1 0.725881 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 9.15429 2 3 3 1 2 1 1 2 2 1 2 +2 1 2 1 1 1 1 1.29503 2 3 2 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.55555 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 0.899695 2 1 1 1 1 1 2 2 1 1 1 +2 1 2 1 1 2 1 0.972723 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 3.62187 2 3 3 2 2 3 1 1 1 1 1 +1 1 2 1 1 1 1 7.11136 1 1 1 1 1 2 1 1 1 1 1 +1 1 1 1 1 1 1 1.10928 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 2.61643 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 6.2605 1 2 2 1 2 1 1 2 1 1 1 +2 1 2 1 1 2 1 8.55173 1 1 1 1 2 3 1 1 1 1 1 +1 1 1 1 1 1 1 1.86787 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.23631 1 3 1 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 0.728145 1 1 1 1 2 3 1 1 1 1 1 +2 1 2 1 1 2 1 4.66434 2 3 3 1 2 3 2 2 1 1 1 +2 1 2 1 1 1 1 3.56254 2 3 3 1 1 2 1 1 2 2 1 +2 1 2 1 1 2 1 2.63999 2 3 3 1 2 3 1 2 2 2 1 +2 1 2 1 1 2 1 0.715897 2 3 3 1 2 2 1 1 1 1 1 +2 1 2 1 1 2 1 1.85198 2 3 3 1 2 2 1 1 2 2 1 +2 1 1 1 1 1 1 3.63826 1 1 1 1 1 1 2 2 2 1 1 +2 1 2 1 1 1 1 7.73862 2 3 3 1 1 3 1 1 2 2 1 +2 1 2 1 1 2 1 10.1699 2 3 3 1 2 1 1 1 1 1 1 +2 1 1 1 1 2 2 2.97722 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.50117 2 2 2 1 1 3 1 1 1 1 1 +2 1 2 1 1 1 1 0.640869 2 2 2 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.72775 1 3 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 5.46047 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 2.21929 1 2 2 1 2 2 1 1 2 1 1 +1 1 1 1 1 1 1 0.438026 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 0.0684539 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 4.15012 2 3 3 1 2 2 1 1 1 1 1 +2 1 2 1 1 2 1 0.161533 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 1.11862 2 3 3 1 2 2 1 1 2 1 2 +2 1 1 1 1 1 1 0.410719 1 1 1 1 2 1 1 1 2 1 1 +2 1 2 1 1 2 1 0.0322208 2 3 3 1 2 1 1 1 2 2 1 +1 1 1 1 1 1 1 3.37212 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 2.78532 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.40432 1 1 1 1 1 1 2 1 1 1 1 +2 1 2 1 1 2 1 3.22403 2 3 3 1 1 3 1 1 2 1 1 +2 1 2 1 1 2 1 1.7234 2 3 3 1 2 1 1 2 1 1 1 +2 1 2 1 1 2 1 0.674939 2 3 3 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 6.9812 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.82705 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 0.935587 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.992564 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 3.47892 1 2 2 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 6.52634 1 2 2 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 3.68841 1 1 1 1 1 3 1 1 2 2 1 +1 1 2 1 1 1 1 0.50506 2 2 2 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.33453 1 2 2 1 2 3 1 1 2 1 1 +2 1 2 1 1 1 1 3.39695 2 2 2 2 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.482289 1 2 1 1 2 2 1 1 1 1 1 +2 1 2 1 1 2 1 0.385094 2 3 3 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 3.92753 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 9.63027 2 3 3 1 2 1 1 1 2 2 1 +1 1 1 1 1 1 1 1.77681 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 15.8749 2 2 2 1 1 1 2 2 1 1 1 +1 1 1 1 1 1 1 0.863939 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 3.5007 2 3 2 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.46447 1 1 1 2 1 1 2 2 1 1 1 +2 1 2 1 1 1 1 4.00622 2 2 2 1 1 3 1 1 2 1 1 +1 1 2 1 1 1 1 2.62894 1 1 1 1 1 2 1 1 1 1 1 +1 1 1 1 1 1 1 0.772251 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 0.254104 1 1 1 1 1 1 1 2 1 1 1 +2 1 2 1 1 1 1 1.35669 1 1 1 1 1 3 1 1 2 2 1 +1 1 1 1 1 1 1 0.408515 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 4.73523 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 2 1 4.84404 2 3 3 1 2 1 1 1 1 1 1 +2 2 2 1 1 2 1 3.08909 2 3 3 2 2 1 1 1 2 2 1 +2 1 1 1 1 1 1 0.500373 1 1 1 2 1 1 1 2 1 1 1 +1 1 2 1 1 1 1 1.42352 1 1 1 1 1 3 2 1 1 1 1 +2 1 2 1 1 2 1 3.19283 2 2 2 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 2.65803 2 3 3 1 2 1 1 1 2 1 2 +1 1 1 1 1 1 1 4.35117 1 1 1 1 1 1 1 1 1 1 1 +2 1 1 1 1 1 1 0.448913 1 1 1 1 1 1 1 1 2 2 1 +2 1 2 1 1 2 1 4.59592 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.68035 1 1 1 1 1 3 2 2 2 2 1 +2 1 2 1 1 1 1 6.86362 2 3 3 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.88662 1 1 1 1 1 1 1 2 1 1 1 +2 1 2 1 1 1 1 6.67913 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 1.72634 1 2 1 1 2 1 1 1 1 1 1 +2 1 1 1 1 1 1 1.01307 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 1.1309 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 2.38128 2 2 2 1 1 1 1 1 2 1 1 +2 1 2 1 1 2 1 2.01195 1 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 4.91973 2 3 3 1 1 2 1 1 2 1 1 +2 1 1 1 1 1 1 3.45795 1 1 1 2 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.66261 1 1 1 2 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 12.2823 1 3 3 1 1 1 1 1 2 1 1 +2 1 2 1 1 2 1 4.98365 2 3 3 1 2 2 1 1 1 1 1 +2 1 2 1 1 1 1 2.28812 1 1 1 1 1 2 1 1 2 2 1 +2 1 2 1 1 1 1 1.98491 2 2 2 2 1 3 1 1 2 1 1 +1 1 1 1 1 1 1 0.441825 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 6.80856 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.14798 1 3 1 2 1 1 2 1 1 1 1 +2 1 2 1 1 2 1 3.47334 2 3 3 1 2 2 1 1 1 1 1 +2 1 2 1 1 2 1 4.29814 1 3 3 1 1 1 1 1 2 1 1 +1 1 2 1 1 1 1 2.14065 1 1 1 1 1 3 1 1 1 1 1 +2 1 1 1 1 1 1 1.96168 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 3.7237 2 3 3 1 2 3 1 2 1 1 1 +1 1 1 1 1 1 1 1.11832 1 1 1 2 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 4.56047 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.452531 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 4.76471 2 3 3 2 2 1 1 1 1 1 1 +1 1 2 1 1 1 1 3.72712 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 1.60393 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 2.22538 1 1 1 1 1 3 1 1 2 2 1 +1 1 1 1 1 1 1 0.778349 1 1 1 1 1 1 1 2 1 1 1 +2 1 2 1 1 1 1 0.136355 2 3 3 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.559837 2 2 2 1 2 1 1 2 1 1 1 +2 1 2 1 1 2 2 1.5521 2 3 3 2 2 1 1 1 2 2 2 +1 1 1 1 1 1 1 1.1683 1 1 1 1 1 1 1 2 1 1 1 +2 1 2 1 1 2 1 3.20792 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.0294523 2 2 2 1 1 3 1 1 2 2 1 +2 1 1 1 1 1 1 1.51016 1 1 1 1 2 1 1 1 2 1 1 +2 1 2 1 1 1 1 1.46157 2 2 2 1 1 1 1 1 2 2 1 +2 1 2 1 1 1 1 7.31961 2 3 3 1 1 3 1 1 1 1 1 +2 1 2 1 1 1 1 2.25565 1 2 2 1 1 1 1 1 2 2 1 +2 1 2 1 1 1 1 0.332537 1 3 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 1.16328 2 3 3 1 2 1 2 2 2 2 1 +1 1 2 1 1 1 1 4.18322 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 8.04276 2 3 3 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 4.12436 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.66478 1 1 1 1 1 1 1 1 1 1 1 +1 1 2 1 1 1 1 6.44237 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 3.30168 2 3 3 1 1 2 2 2 1 1 1 +1 1 1 1 1 1 1 2.57221 1 1 1 1 1 1 1 1 1 1 1 +2 1 1 1 1 1 1 1.5302 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 2.23714 2 3 3 1 1 1 1 2 2 2 1 +2 1 2 1 1 2 1 8.72277 2 3 3 1 2 1 1 1 1 1 1 +1 1 2 1 1 1 1 5.18702 1 1 1 1 1 2 1 1 1 1 1 +2 1 2 1 1 2 1 4.1361 1 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 4.03663 2 2 2 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 2.09322 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 2 1 1.87756 2 3 3 2 2 1 1 1 2 1 1 +2 1 2 1 1 2 1 14.1937 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 3.41049 1 1 1 1 1 3 1 1 2 2 1 +1 1 1 1 1 1 1 2.93445 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 10.5414 1 2 2 1 1 1 1 2 1 1 1 +2 1 2 1 1 2 1 4.09177 2 3 3 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 2.39508 1 1 1 1 1 1 1 2 1 1 1 +2 1 2 1 1 2 1 3.50173 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 6.21675 1 3 2 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.703114 1 2 2 2 2 1 1 1 2 1 1 +2 1 2 1 1 1 1 0.894215 2 3 2 1 1 3 1 2 1 1 1 +2 1 2 1 1 1 1 1.0471 1 2 2 1 1 3 1 1 1 1 1 +1 1 1 1 1 1 1 1.31589 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.68824 1 2 1 1 2 1 1 1 2 2 2 +2 1 2 1 1 2 1 5.48787 2 3 3 1 2 1 1 1 1 1 1 +1 1 2 1 1 1 1 3.34192 1 1 1 2 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 9.5016 2 3 3 1 2 1 1 1 2 1 2 +2 1 2 1 1 2 1 6.07059 2 3 3 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 19.5523 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 4.31889 2 3 3 2 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.87967 1 1 1 1 2 3 1 1 1 1 1 +2 1 2 1 1 2 1 2.77823 2 3 3 1 2 1 1 1 1 1 1 +1 1 2 1 1 1 1 3.5956 1 1 1 1 1 3 1 1 1 1 1 +2 1 1 1 1 1 1 1.31325 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.75989 2 2 2 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 0.621366 1 1 1 1 1 1 1 2 1 1 1 +2 1 2 1 1 1 1 3.14788 2 2 2 1 1 1 1 1 2 1 1 +2 1 2 1 1 2 1 2.41881 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 2 1 4.3647 2 3 3 1 2 3 1 1 2 1 1 +2 1 2 1 1 1 1 0.227306 2 2 2 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 0.0613263 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 13.2932 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.64929 1 1 1 1 2 3 1 1 1 1 1 +2 1 2 1 1 2 1 7.26046 2 3 3 1 2 1 1 1 2 1 1 +1 1 2 1 1 1 1 0.198224 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 6.24718 2 3 3 1 2 2 1 1 2 1 1 +1 1 1 1 1 1 1 0.818786 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 0.367484 2 3 3 2 2 1 2 2 1 1 1 +2 1 2 1 1 1 1 3.24863 1 3 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 3.67769 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.659442 1 3 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 3.40058 2 3 3 1 2 1 1 1 1 1 1 +2 1 1 1 1 1 1 2.95923 1 1 1 2 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.80303 1 1 1 1 2 2 1 1 2 1 1 +1 1 1 1 1 1 1 4.64104 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 6.81146 1 3 3 1 2 2 1 1 1 1 1 +1 1 1 1 1 1 1 1.74035 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 3.33846 2 2 2 1 2 1 1 2 1 1 1 +2 1 2 1 1 1 1 10.5625 1 2 2 1 1 3 1 2 1 1 1 +2 1 2 1 1 1 1 1.75197 2 2 2 2 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 2.57664 1 2 2 1 1 2 2 2 2 1 1 +1 1 2 1 1 1 1 1.31431 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 1 1 0.703583 1 2 1 1 1 1 1 1 2 2 1 +2 1 2 1 1 2 1 4.1339 2 3 3 1 2 3 1 1 2 2 1 +2 1 2 1 1 2 1 0.689182 2 3 3 1 2 1 2 2 1 1 1 +2 1 1 1 1 1 1 1.70247 1 1 1 1 1 1 1 1 2 2 1 +2 1 2 1 1 2 1 3.16831 2 3 3 1 2 1 1 1 1 1 1 +2 1 1 1 1 1 1 2.60872 1 1 1 2 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 5.17883 1 1 1 1 1 1 1 1 1 1 1 +1 1 2 1 1 1 1 1.24226 2 2 2 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 16.3393 1 1 1 1 1 1 1 2 1 1 1 +2 1 1 1 1 1 1 0.355235 1 1 1 1 2 1 1 1 2 2 1 +2 1 2 1 1 2 1 10.1607 2 3 3 1 2 2 1 1 2 1 1 +1 1 1 1 1 1 1 0.0379707 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 4.73676 2 3 3 1 2 1 1 2 1 1 1 +2 1 2 1 1 2 1 0.411721 2 3 3 1 2 1 1 1 2 1 1 +2 1 2 1 1 2 1 5.80853 2 3 3 1 2 1 1 2 1 1 1 +1 1 1 1 1 1 1 2.29781 1 1 1 1 1 1 1 2 1 1 1 +2 1 2 1 1 2 1 2.5112 2 3 3 1 2 3 1 2 1 1 1 +1 1 2 1 1 1 1 2.02508 1 1 1 1 1 3 1 1 1 1 1 +2 1 1 1 1 1 1 6.71109 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 9.53679 2 3 3 1 2 1 1 2 1 1 1 +2 1 2 1 1 2 1 0.325964 2 3 3 1 2 2 2 1 1 1 1 +1 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1 1 1 +2 1 2 1 1 1 1 5.10286 2 2 2 1 1 1 1 1 2 2 1 +1 1 1 1 1 1 1 0.918882 1 1 1 1 1 1 1 1 1 1 1 +2 1 1 1 1 1 1 0.0441354 1 1 1 1 1 1 1 1 2 1 1 +1 1 2 1 1 1 1 0.956322 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 1 1 0.501229 1 2 2 1 2 3 1 1 2 2 1 +2 1 2 1 1 2 1 2.03462 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.49454 1 2 2 1 1 3 1 1 1 1 1 +1 1 2 1 1 1 1 3.47399 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 1 1 3.42912 1 1 1 1 1 2 2 1 2 2 1 +1 1 2 1 1 1 1 3.92437 1 1 1 1 1 3 1 1 1 1 1 +2 1 1 1 1 1 1 0.51396 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.12695 2 3 3 1 2 1 1 1 2 1 1 +2 1 2 1 1 2 1 2.44146 2 3 3 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 9.60595 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 2.0039 2 2 2 1 2 1 1 1 2 2 1 +2 1 2 1 1 2 1 4.10378 2 3 3 1 2 1 1 1 1 1 1 +2 1 1 1 1 1 1 0.386532 1 1 1 1 1 1 2 2 1 1 1 +2 1 2 1 1 1 1 0.75722 1 1 1 1 1 3 1 1 1 1 1 +1 1 1 1 1 1 1 0.506289 1 1 1 1 1 1 1 2 1 1 1 +1 1 1 1 1 1 1 1.84871 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 6.89466 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.30596 2 2 2 1 1 3 1 1 2 2 1 +2 1 2 1 1 1 1 6.80188 1 2 2 1 1 3 1 1 1 1 1 +2 1 2 1 1 1 1 4.86438 1 3 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 2.90783 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.971687 2 3 2 1 1 1 2 2 1 1 1 +2 1 2 1 1 2 1 1.88183 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 4.17229 1 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.927847 2 3 3 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.36548 2 2 2 1 1 3 1 1 1 1 1 +2 1 2 1 1 2 1 2.00101 2 3 3 1 2 1 1 1 1 1 1 +2 1 1 1 1 1 1 2.28421 1 1 1 1 2 1 2 2 1 1 1 +1 1 1 1 1 1 1 1.86953 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 9.0133 1 2 2 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 0.439457 2 2 2 1 2 3 1 1 1 1 1 +1 1 1 1 1 1 1 4.34038 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.32347 2 2 2 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 6.60777 2 3 3 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 0.806183 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 7.83139 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 2.49472 1 1 1 1 2 2 1 1 1 1 1 +2 1 2 1 1 1 1 0.942534 1 2 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 1.70449 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 3.0436 2 3 3 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 3.93414 1 3 3 1 2 1 1 1 2 2 1 +2 1 2 1 1 2 1 2.13185 2 3 3 2 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 0.262005 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 12.7252 1 2 2 1 2 3 1 1 1 1 1 +1 1 1 1 1 1 1 0.465012 1 1 1 1 1 1 2 2 1 1 1 +1 1 2 1 1 1 1 0.455832 1 1 1 1 1 3 1 1 1 1 1 +2 1 1 1 1 1 1 5.52702 1 1 1 1 2 1 1 1 1 1 1 +1 1 2 1 1 1 1 4.37922 1 1 1 1 1 2 1 1 1 1 1 +2 1 2 1 1 1 1 8.52767 1 2 2 1 1 1 1 1 1 1 1 +1 1 2 1 1 1 1 2.53081 1 2 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.34317 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 2.24552 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 3.39164 2 3 3 1 2 1 1 2 1 1 1 +2 1 1 1 1 1 1 0.635824 1 1 1 1 1 1 1 1 2 2 1 +2 1 2 1 1 2 1 0.810242 2 3 3 2 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 20.3734 1 2 2 1 1 1 1 1 1 1 1 +2 1 1 1 1 1 1 0.314643 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.93743 2 2 2 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 2.55162 2 3 3 1 2 3 1 2 1 1 1 +1 1 2 1 1 1 1 0.729802 2 2 2 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 0.0873788 2 3 3 1 2 2 1 1 1 1 1 +1 1 1 1 1 1 1 2.09206 1 1 1 1 1 1 1 2 1 1 1 +2 1 2 1 1 2 1 0.834649 2 3 3 1 2 3 1 1 1 1 1 +1 1 2 1 1 1 1 9.7003 1 1 1 1 1 2 1 1 1 1 1 +2 1 2 1 1 1 1 4.45689 1 1 1 1 1 2 1 1 2 1 1 +2 1 1 1 1 1 1 0.802165 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 5.66099 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.61237 1 1 1 1 1 3 1 1 2 2 1 +1 1 1 1 1 1 1 2.97608 1 1 1 2 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.48756 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 3.87253 2 2 2 2 1 1 1 2 1 1 1 +2 1 2 1 1 2 1 7.42702 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.209732 2 3 3 2 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 2.55715 2 2 2 1 1 2 2 2 1 1 1 +2 1 2 1 1 1 1 0.207224 2 2 2 1 2 1 1 1 1 1 1 +2 1 1 1 1 2 1 7.37554 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 4.11792 2 3 3 2 2 1 2 2 1 1 1 +2 1 1 1 1 1 1 1.53867 1 1 1 1 1 1 2 2 2 1 2 +2 1 2 1 1 2 1 0.0302816 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 1 1 2.28003 1 1 1 1 2 2 1 1 1 1 1 +2 1 2 1 1 2 1 2.9777 2 3 3 1 2 1 2 1 2 2 1 +1 1 1 1 1 1 1 0.0199808 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 3.29523 1 3 1 1 1 2 1 1 1 1 1 +2 1 2 1 1 2 1 1.64431 2 3 3 1 2 1 1 2 1 1 1 +1 1 1 1 1 1 1 1.65059 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.37525 1 1 1 1 1 1 1 2 1 1 1 +2 1 2 1 1 2 1 1.73187 2 3 3 1 2 1 1 1 2 1 1 +2 1 2 1 1 2 1 1.01163 2 3 3 1 2 1 1 1 2 1 1 +2 1 2 1 1 2 1 1.87413 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 4.35695 2 2 2 1 1 2 1 1 1 1 1 +2 1 2 1 1 1 1 0.273621 2 3 3 1 1 3 1 1 1 1 1 +2 1 1 1 1 2 1 3.43754 1 1 1 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 0.69945 2 2 2 1 1 3 1 1 1 1 1 +1 1 1 1 1 1 1 6.24086 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 0.112064 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 3.88415 1 2 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 1.06286 2 2 2 1 1 1 1 1 2 1 1 +2 1 2 1 1 2 1 2.17353 2 3 3 1 2 1 1 2 1 1 1 +1 1 1 1 1 1 1 1.49488 1 1 1 2 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 8.26156 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 2.29956 2 3 3 1 2 1 1 1 2 1 2 +2 1 2 1 1 2 1 5.02241 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 1.79705 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 2.41045 1 2 2 1 2 2 1 2 1 1 1 +2 1 2 1 1 1 1 3.62587 1 2 2 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 3.03338 2 3 3 1 2 3 1 1 2 2 1 +2 1 1 1 1 1 1 1.32098 1 1 1 1 2 1 1 1 1 1 1 +1 1 2 1 1 1 1 2.90188 1 1 1 1 1 3 1 1 1 1 1 +1 1 2 1 1 1 1 2.5172 2 2 2 1 1 1 1 1 1 1 1 +1 1 2 1 1 1 1 1.59161 1 1 1 1 1 2 1 1 1 1 1 +2 1 2 1 1 1 1 1.51327 1 2 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 3.61682 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 0.582747 2 3 3 1 2 1 1 1 1 1 1 +2 1 1 1 1 1 1 1.78714 1 1 1 1 1 1 1 1 2 1 1 +2 1 2 1 1 2 1 3.90871 2 3 3 1 2 1 1 1 2 2 1 +2 1 2 1 1 2 1 2.12194 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 2 1 2.85085 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 2.63259 1 1 1 1 1 3 1 1 1 1 1 +2 1 2 1 1 1 1 1.90261 1 1 1 1 2 3 1 1 1 1 1 +2 1 2 1 1 2 1 1.12473 2 3 3 2 2 2 1 1 1 1 1 +1 1 2 1 1 1 1 0.744409 2 2 2 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 0.553062 2 3 3 1 2 3 2 2 1 1 1 +2 1 2 1 1 2 1 4.13517 2 3 3 2 2 1 1 1 1 1 1 +2 1 2 1 1 1 1 5.34859 1 3 1 1 1 3 1 1 1 1 1 +1 1 2 1 1 1 1 4.14217 2 2 2 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 4.68854 1 1 1 1 1 1 1 1 1 1 1 +2 1 1 1 1 1 1 2.47433 1 1 1 1 2 1 1 1 2 1 1 +2 1 2 1 1 1 1 4.04289 2 3 3 1 2 1 1 1 1 1 1 +1 1 2 1 1 1 1 4.64514 2 2 2 1 1 1 1 2 1 1 1 +2 1 1 1 1 1 1 3.52575 1 1 1 2 1 1 1 1 2 2 1 +2 1 2 1 1 2 1 0.0085396 2 3 3 1 2 1 1 1 2 2 1 +2 1 2 1 1 2 1 3.75628 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 4.46408 2 3 3 1 2 1 2 2 1 1 1 +1 1 2 1 1 1 1 4.407 1 2 2 1 1 1 2 1 1 1 1 +2 1 2 1 1 2 1 12.9879 2 3 3 1 2 1 1 1 2 1 1 +2 1 2 1 1 2 1 5.42745 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 2.27077 2 3 3 1 2 1 1 1 2 1 1 +1 1 1 1 1 1 1 4.19191 1 1 1 1 1 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.43925 1 1 1 1 1 1 1 2 1 1 1 +1 1 1 1 1 1 1 4.98537 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 1.71189 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 4.91003 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 2 2 1 0.809663 2 3 3 1 2 1 1 1 1 1 1 +2 1 2 1 1 2 1 3.78373 2 3 3 1 2 1 1 1 1 1 1 +2 1 1 1 1 1 1 1.64728 1 1 1 1 2 1 1 2 2 1 1 +2 1 2 1 1 2 1 0.977114 2 3 3 1 2 2 1 1 1 1 1 +2 1 2 1 1 2 1 4.78619 2 3 3 1 2 1 1 1 1 1 1 +2 1 1 1 1 2 1 4.88483 1 1 1 2 2 1 1 1 2 1 1 +1 1 1 1 1 1 1 0.0447191 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 2 1 6.22958 2 3 3 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 4.02524 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 5.10729 1 3 2 1 1 1 1 1 2 2 1 +2 1 2 1 1 2 1 8.97099 2 3 3 1 2 3 1 1 1 1 1 +2 1 2 1 1 2 1 5.59486 2 3 3 1 2 1 1 1 1 1 1 +1 1 1 1 1 1 1 1.13786 1 1 1 1 1 1 1 1 1 1 1 +2 1 2 1 1 1 1 11.3795 1 2 2 1 1 1 1 1 1 1 1 + diff --git a/sourcecodes/data/old/examplecar/OVIgraphviz.txt b/sourcecodes/data/old/examplecar/OVIgraphviz.txt new file mode 100644 index 00000000..2aaaecb2 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIgraphviz.txt @@ -0,0 +1,70 @@ +digraph G { +size="10,10"; ratio = fill; +node [shape=square,width=1.5]; +Dist -> BatAge; +Dist -> Timing; +Dist -> Plugs; +Dist -> AirFilter; +Dist -> GasTank; +Dist -> GasFilter; +SpkQual -> Starts; +MFuse -> Starts; +MFuse -> Dist; +MFuse -> SpkQual; +MFuse -> Starter; +MFuse -> BatAge; +MFuse -> Charging; +MFuse -> Timing; +MFuse -> Cranks; +MFuse -> Plugs; +MFuse -> AirFilter; +MFuse -> Air; +MFuse -> Fuel; +MFuse -> GasTank; +MFuse -> GasFilter; +Alter -> Dist; +Alter -> MFuse; +Alter -> BatAge; +Alter -> Charging; +Alter -> Timing; +Alter -> Plugs; +Alter -> AirFilter; +Alter -> Air; +Alter -> GasTank; +Alter -> GasFilter; +Starter -> Cranks; +StMotor -> MFuse; +StMotor -> Alter; +StMotor -> Starter; +StMotor -> BatAge; +StMotor -> Timing; +StMotor -> Plugs; +StMotor -> AirFilter; +StMotor -> Air; +StMotor -> Fuel; +StMotor -> GasTank; +StMotor -> GasFilter; +PlugVolt -> Starts; +PlugVolt -> Dist; +PlugVolt -> SpkQual; +PlugVolt -> MFuse; +PlugVolt -> Alter; +PlugVolt -> Starter; +PlugVolt -> StMotor; +PlugVolt -> Charging; +PlugVolt -> Cranks; +BatVolt -> Starts; +BatVolt -> Dist; +BatVolt -> SpkQual; +BatVolt -> MFuse; +BatVolt -> Alter; +BatVolt -> Starter; +BatVolt -> StMotor; +BatVolt -> Charging; +BatVolt -> PlugVolt; +BatVolt -> Cranks; +Plugs -> SpkQual; +AirFilter -> Air; +GasTank -> Fuel; +GasFilter -> Fuel; +} \ No newline at end of file diff --git a/sourcecodes/data/old/examplecar/OVIk.txt b/sourcecodes/data/old/examplecar/OVIk.txt new file mode 100644 index 00000000..d00491fd --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIk.txt @@ -0,0 +1 @@ +1 diff --git a/sourcecodes/data/old/examplecar/OVImap.txt b/sourcecodes/data/old/examplecar/OVImap.txt new file mode 100644 index 00000000..eda717d2 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVImap.txt @@ -0,0 +1,19 @@ +Starts 3 0.432505 1.751249 +Dist 3 0.094441 1.008991 +SpkQual 2 0.434234 1.748252 +MFuse 2 0.031607 1.000999 +Alter 2 0.054690 1.002997 +Starter 2 0.490666 1.402597 +StMotor 2 0.070534 1.004995 +BatAge 2 2.948418 3.295892 +Charging 2 0.500244 1.497502 +PlugVolt 2 0.908145 2.090909 +BatVolt 2 0.914876 1.999001 +Timing 2 0.293230 1.094905 +Cranks 2 0.500010 1.515485 +Plugs 2 0.819700 1.518482 +AirFilter 3 0.294607 1.095904 +Air 2 0.375671 1.169830 +Fuel 2 0.416982 1.223776 +GasTank 2 0.295974 1.096903 +GasFilter 1 0.164975 1.027972 diff --git a/sourcecodes/data/old/examplecar/OVImapdata.txt b/sourcecodes/data/old/examplecar/OVImapdata.txt new file mode 100644 index 00000000..d1eac895 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVImapdata.txt @@ -0,0 +1 @@ +BatVolt PlugVolt StMotor Alter MFuse Charging Starter Cranks Dist GasFilter GasTank Fuel AirFilter Air Plugs SpkQual Starts Timing BatAge diff --git a/sourcecodes/data/old/examplecar/OVIname.txt b/sourcecodes/data/old/examplecar/OVIname.txt new file mode 100644 index 00000000..e7901e87 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIname.txt @@ -0,0 +1 @@ +Starts Dist SpkQual MFuse Alter Starter StMotor BatAge Charging PlugVolt BatVolt Timing Cranks Plugs AirFilter Air Fuel GasTank GasFilter diff --git a/sourcecodes/data/old/examplecar/OVInet_figure.txt b/sourcecodes/data/old/examplecar/OVInet_figure.txt new file mode 100644 index 00000000..ceed746e --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVInet_figure.txt @@ -0,0 +1,237 @@ +19 +2100 1800 +BatVolt 788 0 +PlugVolt 998 180 +StMotor 788 360 +Alter 998 540 +MFuse 788 720 +Charging 472 900 +Starter 998 900 +Cranks 0 1080 +Dist 1523 900 +GasFilter 263 1080 +GasTank 525 1080 +Fuel 472 1260 +AirFilter 788 1080 +Air 998 1260 +Plugs 1050 1080 +SpkQual 1523 1260 +Starts 788 1440 +Timing 1313 1080 +BatAge 1575 1080 +BatVolt 3 +250 150 +0 +10 2 3 4 5 6 7 8 9 16 17 +1 0.4184 +2 0.1639 +3 0.4177 +PlugVolt 3 +250 150 +1 1 +9 3 4 5 6 7 8 9 16 17 +1 0.3706 +2 0.1678 +3 0.4616 +StMotor 2 +250 150 +2 1 2 +11 4 5 7 10 11 12 13 14 15 18 19 +1 0.9955 +2 0.0045 +Alter 2 +250 150 +3 1 2 3 +10 5 6 9 10 11 13 14 15 18 19 +1 0.9970 +2 0.0030 +MFuse 2 +250 150 +4 1 2 3 4 +14 6 7 8 9 10 11 12 13 14 15 16 17 18 19 +1 0.9990 +2 0.0010 +Charging 2 +250 150 +4 1 2 4 5 +0 +1 0.5024 +2 0.4976 +Starter 2 +250 150 +4 1 2 3 5 +1 8 +1 0.5977 +2 0.4023 +Cranks 2 +250 150 +4 1 2 5 7 +0 +1 0.4848 +2 0.5152 +Dist 2 +250 150 +4 1 2 4 5 +6 10 11 13 15 18 19 +1 0.9910 +2 0.0090 +GasFilter 2 +250 150 +4 3 4 5 9 +1 12 +1 0.9725 +2 0.0275 +GasTank 2 +250 150 +4 3 4 5 9 +1 12 +1 0.9031 +2 0.0969 +Fuel 2 +250 150 +4 3 5 10 11 +0 +1 0.7756 +2 0.2244 +AirFilter 2 +250 150 +4 3 4 5 9 +1 14 +1 0.9040 +2 0.0960 +Air 2 +250 150 +4 3 4 5 13 +0 +1 0.8301 +2 0.1699 +Plugs 3 +250 150 +4 3 4 5 9 +1 16 +1 0.6922 +2 0.0970 +3 0.2109 +SpkQual 2 +250 150 +4 1 2 5 15 +1 17 +1 0.2568 +2 0.7432 +Starts 2 +250 150 +4 1 2 5 16 +0 +1 0.2497 +2 0.7503 +Timing 2 +250 150 +4 3 4 5 9 +0 +1 0.9053 +2 0.0947 +BatAge 1 +250 150 +4 3 4 5 9 +0 +-2.1178 0.0437 +-2.0287 0.0524 +-1.9396 0.0623 +-1.8505 0.0736 +-1.7614 0.0862 +-1.6723 0.1001 +-1.5832 0.1155 +-1.4941 0.1321 +-1.4050 0.1499 +-1.3159 0.1689 +-1.2268 0.1888 +-1.1377 0.2093 +-1.0486 0.2303 +-0.9595 0.2515 +-0.8704 0.2725 +-0.7813 0.2929 +-0.6922 0.3124 +-0.6031 0.3306 +-0.5140 0.3471 +-0.4249 0.3617 +-0.3358 0.3740 +-0.2467 0.3836 +-0.1576 0.3905 +-0.0685 0.3944 +0.0206 0.3952 +0.1097 0.3930 +0.1988 0.3877 +0.2879 0.3795 +0.3770 0.3687 +0.4661 0.3553 +0.5552 0.3398 +0.6443 0.3225 +0.7334 0.3036 +0.8225 0.2837 +0.9116 0.2629 +1.0007 0.2419 +1.0898 0.2207 +1.1789 0.1999 +1.2680 0.1796 +1.3571 0.1601 +1.4462 0.1417 +1.5353 0.1243 +1.6244 0.1083 +1.7135 0.0936 +1.8026 0.0803 +1.8917 0.0683 +1.9808 0.0576 +2.0699 0.0483 +2.1590 0.0401 +2.2481 0.0331 +2.3372 0.0271 +2.4263 0.0220 +2.5154 0.0177 +2.6045 0.0142 +2.6936 0.0112 +2.7827 0.0088 +2.8718 0.0069 +2.9609 0.0054 +3.0500 0.0041 +3.1391 0.0031 +3.2282 0.0024 +3.3173 0.0018 +3.4064 0.0013 +3.4954 0.0010 +3.5845 0.0007 +3.6736 0.0005 +3.7627 0.0004 +3.8518 0.0003 +3.9409 0.0002 +4.0300 0.0001 +4.1191 0.0001 +4.2082 0.0001 +4.2973 0.0000 +4.3864 0.0000 +4.4755 0.0000 +4.5646 0.0000 +4.6537 0.0000 +4.7428 0.0000 +4.8319 0.0000 +4.9210 0.0000 +5.0101 0.0000 +5.0992 0.0000 +5.1883 0.0000 +5.2774 0.0000 +5.3665 0.0000 +5.4556 0.0000 +5.5447 0.0000 +5.6338 0.0000 +5.7229 0.0000 +5.8120 0.0000 +5.9011 0.0000 +5.9902 0.0000 +6.0793 0.0000 +6.1684 0.0000 +6.2575 0.0000 +6.3466 0.0000 +6.4357 0.0000 +6.5248 0.0000 +6.6139 0.0000 +6.7030 0.0000 +6.7921 0.0000 diff --git a/sourcecodes/data/old/examplecar/OVInet_figure_new.txt b/sourcecodes/data/old/examplecar/OVInet_figure_new.txt new file mode 100644 index 00000000..bd2ec975 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVInet_figure_new.txt @@ -0,0 +1,138 @@ +19 +19 +2100 1800 +BatVolt 788 0 +PlugVolt 998 180 +StMotor 788 360 +Alter 998 540 +MFuse 788 720 +Charging 472 900 +Starter 998 900 +Cranks 0 1080 +Dist 1523 900 +GasFilter 263 1080 +GasTank 525 1080 +Fuel 472 1260 +AirFilter 788 1080 +Air 998 1260 +Plugs 1050 1080 +SpkQual 1523 1260 +Starts 788 1440 +Timing 1313 1080 +BatAge 1575 1080 +BatVolt 3 +250 150 +0 +10 2 3 4 5 6 7 8 9 16 17 +1 0.4186 +2 0.1642 +3 0.4172 +PlugVolt 3 +250 150 +1 1 +9 3 4 5 6 7 8 9 16 17 +1 0.3716 +2 0.1684 +3 0.4600 +StMotor 2 +250 150 +2 1 2 +11 4 5 7 10 11 12 13 14 15 18 19 +1 0.9982 +2 0.0018 +Alter 2 +250 150 +3 1 2 3 +10 5 6 9 10 11 13 14 15 18 19 +1 0.9985 +2 0.0015 +MFuse 2 +250 150 +4 1 2 3 4 +14 6 7 8 9 10 11 12 13 14 15 16 17 18 19 +1 1.0000 +2 0.0000 +Charging 2 +250 150 +4 1 2 4 5 +0 +1 0.5027 +2 0.4973 +Starter 2 +250 150 +4 1 2 3 5 +1 8 +1 0.5996 +2 0.4004 +Cranks 2 +250 150 +4 1 2 5 7 +0 +1 0.4861 +2 0.5139 +Dist 2 +250 150 +4 1 2 4 5 +6 10 11 13 15 18 19 +1 0.9948 +2 0.0052 +GasFilter 2 +250 150 +4 3 4 5 9 +1 12 +1 0.9736 +2 0.0264 +GasTank 2 +250 150 +4 3 4 5 9 +1 12 +1 0.9048 +2 0.0952 +Fuel 2 +250 150 +4 3 5 10 11 +0 +1 0.7770 +2 0.2230 +AirFilter 2 +250 150 +4 3 4 5 9 +1 14 +1 0.9045 +2 0.0955 +Air 2 +250 150 +4 3 4 5 13 +0 +1 0.8304 +2 0.1696 +Plugs 3 +250 150 +4 3 4 5 9 +1 16 +1 0.6923 +2 0.0968 +3 0.2108 +SpkQual 2 +250 150 +4 1 2 5 15 +1 17 +1 0.2573 +2 0.7427 +Starts 2 +250 150 +4 1 2 5 16 +0 +1 0.2504 +2 0.7496 +Timing 2 +250 150 +4 3 4 5 9 +0 +1 0.9080 +2 0.0920 +BatAge 1 +250 150 +4 3 4 5 9 +0 +-1.3159 1.0000 diff --git a/sourcecodes/data/old/examplecar/OVInnode.txt b/sourcecodes/data/old/examplecar/OVInnode.txt new file mode 100644 index 00000000..d6b24041 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVInnode.txt @@ -0,0 +1 @@ +19 diff --git a/sourcecodes/data/old/examplecar/OVInrows.txt b/sourcecodes/data/old/examplecar/OVInrows.txt new file mode 100644 index 00000000..7d802a3e --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVInrows.txt @@ -0,0 +1 @@ +1002 diff --git a/sourcecodes/data/old/examplecar/OVIparent.txt b/sourcecodes/data/old/examplecar/OVIparent.txt new file mode 100644 index 00000000..b8626c4c --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIparent.txt @@ -0,0 +1 @@ +4 diff --git a/sourcecodes/data/old/examplecar/OVIstructure_input.txt b/sourcecodes/data/old/examplecar/OVIstructure_input.txt new file mode 100644 index 00000000..cad732f3 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIstructure_input.txt @@ -0,0 +1,20 @@ +Starts Dist SpkQual MFuse Alter Starter StMotor BatAge Charging PlugVolt BatVolt Timing Cranks Plugs AirFilter Air Fuel GasTank GasFilter +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 1 1 +1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +1 1 1 0 0 1 0 1 1 0 0 1 1 1 1 1 1 1 1 +0 1 0 1 0 0 0 1 1 0 0 1 0 1 1 1 0 1 1 +0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 +0 0 0 1 1 1 0 1 0 0 0 1 0 1 1 1 1 1 1 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +1 1 1 1 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 +1 1 1 1 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 diff --git a/sourcecodes/data/old/examplecar/OVIstructure_input_temp.txt b/sourcecodes/data/old/examplecar/OVIstructure_input_temp.txt new file mode 100644 index 00000000..09d40aa3 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIstructure_input_temp.txt @@ -0,0 +1,20 @@ +Starts Dist SpkQual MFuse Alter Starter StMotor BatAge Charging PlugVolt BatVolt Timing Cranks Plugs AirFilter Air Fuel GasTank GasFilter +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 1.000000 0.000000 0.000000 1.000000 1.000000 +1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +1.000000 1.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 1.000000 0.000000 0.000000 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 +0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 1.000000 1.000000 0.000000 1.000000 1.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 1.000000 1.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 0.000000 1.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 diff --git a/sourcecodes/data/old/examplecar/OVIstructure_old.txt b/sourcecodes/data/old/examplecar/OVIstructure_old.txt new file mode 100644 index 00000000..22f14ba3 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIstructure_old.txt @@ -0,0 +1,19 @@ +Dist 0.9910 0.0090 +BatAge 0.0437 0.0524 0.0623 0.0736 0.0862 0.1001 0.1155 0.1321 0.1499 0.1689 0.1888 0.2093 0.2303 0.2515 0.2725 0.2929 0.3124 0.3306 0.3471 0.3617 0.3740 0.3836 0.3905 0.3944 0.3952 0.3930 0.3877 0.3795 0.3687 0.3553 0.3398 0.3225 0.3036 0.2837 0.2629 0.2419 0.2207 0.1999 0.1796 0.1601 0.1417 0.1243 0.1083 0.0936 0.0803 0.0683 0.0576 0.0483 0.0401 0.0331 0.0271 0.0220 0.0177 0.0142 0.0112 0.0088 0.0069 0.0054 0.0041 0.0031 0.0024 0.0018 0.0013 0.0010 0.0007 0.0005 0.0004 0.0003 0.0002 0.0001 0.0001 0.0001 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 +Timing 0.9053 0.0947 +Plugs 0.6922 0.0970 0.2109 +AirFilter 0.9040 0.0960 +GasTank 0.9031 0.0969 +GasFilter 0.9725 0.0275 +SpkQual 0.2568 0.7432 +Starts 0.2497 0.7503 +MFuse 0.9990 0.0010 +Starter 0.5977 0.4023 +Charging 0.5024 0.4976 +Cranks 0.4848 0.5152 +Air 0.8301 0.1699 +Fuel 0.7756 0.2244 +Alter 0.9970 0.0030 +StMotor 0.9955 0.0045 +PlugVolt 0.3706 0.1678 0.4616 +BatVolt 0.4184 0.1639 0.4177 diff --git a/sourcecodes/data/old/examplecar/OVIthr.txt b/sourcecodes/data/old/examplecar/OVIthr.txt new file mode 100644 index 00000000..2eb3c4fe --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIthr.txt @@ -0,0 +1 @@ +0.5 diff --git a/sourcecodes/data/old/examplecar/OVItype.txt b/sourcecodes/data/old/examplecar/OVItype.txt new file mode 100644 index 00000000..0b76081c --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVItype.txt @@ -0,0 +1,2 @@ +Starts Dist SpkQual MFuse Alter Starter StMotor BatAge Charging PlugVolt BatVolt Timing Cranks Plugs AirFilter Air Fuel GasTank GasFilter +2 2 2 2 2 2 2 1 2 3 3 2 2 3 2 2 2 2 2 diff --git a/sourcecodes/data/old/examplecar/OVIvar.txt b/sourcecodes/data/old/examplecar/OVIvar.txt new file mode 100644 index 00000000..dec2bf5d --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIvar.txt @@ -0,0 +1 @@ +19 \ No newline at end of file diff --git a/sourcecodes/data/old/examplecar/OVIvardata.txt b/sourcecodes/data/old/examplecar/OVIvardata.txt new file mode 100644 index 00000000..e595bf94 --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIvardata.txt @@ -0,0 +1 @@ +-1.3159 \ No newline at end of file diff --git a/sourcecodes/data/old/examplecar/OVIvarname.txt b/sourcecodes/data/old/examplecar/OVIvarname.txt new file mode 100644 index 00000000..2453221d --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIvarname.txt @@ -0,0 +1 @@ +BatAge \ No newline at end of file diff --git a/sourcecodes/data/old/examplecar/OVIwhite.txt b/sourcecodes/data/old/examplecar/OVIwhite.txt new file mode 100644 index 00000000..83e81b8b --- /dev/null +++ b/sourcecodes/data/old/examplecar/OVIwhite.txt @@ -0,0 +1 @@ +From To diff --git a/sourcecodes/data/old/examplecar/old/OVIrun_evidencemodified.sh b/sourcecodes/data/old/examplecar/old/OVIrun_evidencemodified.sh new file mode 100644 index 00000000..dab5c39a --- /dev/null +++ b/sourcecodes/data/old/examplecar/old/OVIrun_evidencemodified.sh @@ -0,0 +1,38 @@ +#!/bin/sh +# script for execution of deployed applications +# +# Sets up the MCR environment for the current $ARCH and executes +# the specified command. +# +exe_name=$0 +exe_dir=`dirname "$0"` +echo "------------------------------------------" +if [ "x$1" = "x" ]; then + echo Usage: + echo $0 \<deployedMCRroot\> args +else + echo Setting up environment variables + MCRROOT="$1" + echo --- + LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; + MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; + XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; + export LD_LIBRARY_PATH; + export XAPPLRESDIR; + echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; + shift 1 + args= + while [ $# -gt 0 ]; do + token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank + args="${args} ${token}" + shift + done + "${exe_dir}"/evidencemodified OVI +fi +exit diff --git a/sourcecodes/data/old/examplecar/old/OVIrun_initialstructure.sh b/sourcecodes/data/old/examplecar/old/OVIrun_initialstructure.sh new file mode 100644 index 00000000..d47ae324 --- /dev/null +++ b/sourcecodes/data/old/examplecar/old/OVIrun_initialstructure.sh @@ -0,0 +1,38 @@ +#!/bin/sh +# script for execution of deployed applications +# +# Sets up the MCR environment for the current $ARCH and executes +# the specified command. +# +exe_name=$0 +exe_dir=`dirname "$0"` +echo "------------------------------------------" +if [ "x$1" = "x" ]; then + echo Usage: + echo $0 \<deployedMCRroot\> args +else + echo Setting up environment variables + MCRROOT="$1" + echo --- + LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; + MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; + XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; + export LD_LIBRARY_PATH; + export XAPPLRESDIR; + echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; + shift 1 + args= + while [ $# -gt 0 ]; do + token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank + args="${args} ${token}" + shift + done + "${exe_dir}"/initialstructure OVI +fi +exit diff --git a/sourcecodes/data/old/examplezoo/fSfban.txt b/sourcecodes/data/old/examplezoo/fSfban.txt new file mode 100644 index 00000000..9197eeec --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfban.txt @@ -0,0 +1,261 @@ +From To +aquatic airborne +aquatic venomous +aquatic predator +aquatic domestic +airborne aquatic +airborne venomous +airborne predator +airborne domestic +venomous aquatic +venomous airborne +venomous predator +venomous domestic +predator aquatic +predator airborne +predator venomous +predator domestic +domestic aquatic +domestic airborne +domestic venomous +domestic predator +eggs aquatic +eggs airborne +eggs venomous +eggs predator +eggs domestic +milk aquatic +milk airborne +milk venomous +milk predator +milk domestic +backbone aquatic +backbone airborne +backbone venomous +backbone predator +backbone domestic +breathes aquatic +breathes airborne +breathes venomous +breathes predator +breathes domestic +catsize aquatic +catsize airborne +catsize venomous +catsize predator +catsize domestic +tail aquatic +tail airborne +tail venomous +tail predator +tail domestic +toothed aquatic +toothed airborne +toothed venomous +toothed predator +toothed domestic +hair aquatic +hair airborne +hair venomous +hair predator +hair domestic +feathers aquatic +feathers airborne +feathers venomous +feathers predator +feathers domestic +fins aquatic +fins airborne +fins venomous +fins predator +fins domestic +legs aquatic +legs airborne +legs venomous +legs predator +legs domestic +type aquatic +type airborne +type venomous +type predator +type domestic +eggs aquatic +eggs airborne +eggs venomous +eggs predator +eggs domestic +milk aquatic +milk airborne +milk venomous +milk predator +milk domestic +backbone aquatic +backbone airborne +backbone venomous +backbone predator +backbone domestic +breathes aquatic +breathes airborne +breathes venomous +breathes predator +breathes domestic +catsize eggs +catsize milk +catsize backbone +catsize breathes +tail eggs +tail milk +tail backbone +tail breathes +toothed eggs +toothed milk +toothed backbone +toothed breathes +hair eggs +hair milk +hair backbone +hair breathes +feathers eggs +feathers milk +feathers backbone +feathers breathes +fins eggs +fins milk +fins backbone +fins breathes +legs eggs +legs milk +legs backbone +legs breathes +type eggs +type milk +type backbone +type breathes +catsize tail +catsize toothed +catsize hair +catsize feathers +catsize fins +catsize legs +tail catsize +tail toothed +tail hair +tail feathers +tail fins +tail legs +toothed catsize +toothed tail +toothed hair +toothed feathers +toothed fins +toothed legs +hair catsize +hair tail +hair toothed +hair feathers +hair fins +hair legs +feathers catsize +feathers tail +feathers toothed +feathers hair +feathers fins +feathers legs +fins catsize +fins tail +fins toothed +fins hair +fins feathers +fins legs +legs catsize +legs tail +legs toothed +legs hair +legs feathers +legs fins +catsize aquatic +catsize airborne +catsize venomous +catsize predator +catsize domestic +tail aquatic +tail airborne +tail venomous +tail predator +tail domestic +toothed aquatic +toothed airborne +toothed venomous +toothed predator +toothed domestic +hair aquatic +hair airborne +hair venomous +hair predator +hair domestic +feathers aquatic +feathers airborne +feathers venomous +feathers predator +feathers domestic +fins aquatic +fins airborne +fins venomous +fins predator +fins domestic +legs aquatic +legs airborne +legs venomous +legs predator +legs domestic +catsize eggs +catsize milk +catsize backbone +catsize breathes +tail eggs +tail milk +tail backbone +tail breathes +toothed eggs +toothed milk +toothed backbone +toothed breathes +hair eggs +hair milk +hair backbone +hair breathes +feathers eggs +feathers milk +feathers backbone +feathers breathes +fins eggs +fins milk +fins backbone +fins breathes +legs eggs +legs milk +legs backbone +legs breathes +type catsize +type tail +type toothed +type hair +type feathers +type fins +type legs +type aquatic +type airborne +type venomous +type predator +type domestic +type eggs +type milk +type backbone +type breathes +type catsize +type tail +type toothed +type hair +type feathers +type fins +type legs diff --git a/sourcecodes/data/old/examplezoo/fSfcontinuous_input.txt b/sourcecodes/data/old/examplezoo/fSfcontinuous_input.txt new file mode 100644 index 00000000..340ad4f6 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfcontinuous_input.txt @@ -0,0 +1,104 @@ +hair feathers eggs milk airborne aquatic predator toothed backbone breathes venomous fins legs tail domestic catsize type +2 2 2 2 2 2 2 2 2 2 2 2 6 2 2 2 7 +1 1 2 1 1 2 2 2 2 1 1 2 1 2 1 1 4 +1 1 2 1 1 2 1 2 2 1 1 2 1 2 2 1 4 +1 1 2 1 1 2 2 2 2 1 1 2 1 2 1 1 4 +1 1 2 1 1 2 2 2 2 1 1 2 1 2 1 1 4 +1 1 2 1 1 1 2 1 1 1 1 1 1 1 1 1 7 +1 1 2 1 1 2 2 2 2 1 1 2 1 2 1 2 4 +1 1 1 2 1 2 2 2 2 2 1 2 1 2 1 2 1 +1 1 2 1 1 2 1 2 2 1 1 2 1 2 1 1 4 +1 1 2 1 1 2 2 2 2 1 1 2 1 2 1 1 4 +1 1 2 1 1 2 2 2 2 1 1 2 1 2 1 2 4 +1 1 2 1 1 2 2 2 2 1 1 2 1 2 1 1 4 +1 1 2 1 1 1 2 2 2 2 2 1 1 2 1 1 3 +1 1 1 2 1 2 2 2 2 2 1 2 1 2 1 2 1 +1 1 2 1 1 2 1 2 2 1 1 2 1 2 1 1 4 +2 1 1 2 1 2 2 2 2 2 1 2 1 1 1 2 1 +1 1 1 1 1 2 2 2 2 1 2 1 1 2 1 1 3 +1 1 2 1 1 2 2 1 1 1 2 1 1 1 1 1 7 +1 1 2 1 1 1 2 2 2 2 1 1 1 2 1 1 3 +1 1 2 1 1 1 1 1 1 2 1 1 1 1 1 1 7 +1 1 2 1 1 2 1 2 2 1 1 2 1 2 1 1 4 +1 1 2 1 1 2 2 2 2 1 2 2 1 2 1 2 4 +1 1 2 1 1 2 2 2 2 1 1 2 1 2 1 2 4 +1 1 2 1 1 1 1 1 1 2 1 1 1 1 1 1 7 +1 2 2 1 2 1 1 1 2 2 1 1 2 2 2 1 2 +1 2 2 1 2 1 2 1 2 2 1 1 2 2 1 1 2 +1 2 2 1 2 1 1 1 2 2 1 1 2 2 2 1 2 +1 2 2 1 2 2 1 1 2 2 1 1 2 2 1 1 2 +1 2 2 1 2 1 1 1 2 2 1 1 2 2 1 2 2 +2 1 1 2 2 1 1 2 2 2 1 1 2 2 1 1 1 +2 1 1 2 1 1 2 2 2 2 1 1 2 1 2 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 2 1 1 2 1 +1 2 2 1 2 2 2 1 2 2 1 1 2 2 1 1 2 +1 2 2 1 2 1 2 1 2 2 1 1 2 2 1 1 2 +1 2 2 1 1 1 2 1 2 2 1 1 2 2 1 1 2 +1 2 2 1 2 1 1 1 2 2 1 1 2 2 1 1 2 +1 2 2 1 1 1 1 1 2 2 1 1 2 2 1 2 2 +1 2 2 1 2 1 1 1 2 2 1 1 2 2 2 1 2 +1 2 2 1 1 2 2 1 2 2 1 1 2 2 1 2 2 +1 2 2 1 2 1 1 1 2 2 1 1 2 2 1 1 2 +1 2 2 1 1 1 2 1 2 2 1 1 2 2 1 2 2 +2 1 1 2 1 2 2 2 2 2 1 2 2 2 1 2 1 +1 2 2 1 2 2 2 1 2 2 1 1 2 2 1 1 2 +1 2 2 1 2 2 2 1 2 2 1 1 2 2 1 1 2 +1 2 2 1 2 1 1 1 2 2 1 1 2 2 1 1 2 +2 1 1 2 1 1 1 2 2 2 1 1 2 2 1 1 1 +1 2 2 1 2 2 1 1 2 2 1 1 2 2 1 2 2 +2 1 1 2 2 1 1 2 2 2 1 1 2 2 1 1 1 +1 2 2 1 2 1 2 1 2 2 1 1 2 2 1 2 2 +2 1 1 2 1 1 1 2 2 2 1 1 2 2 1 2 1 +1 2 2 1 2 1 1 1 2 2 1 1 2 2 1 1 2 +2 1 1 2 1 1 2 2 2 2 1 1 3 1 1 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 1 1 2 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 2 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 1 2 1 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +1 1 2 1 1 2 2 1 1 1 1 1 3 1 1 1 7 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 1 2 1 +1 1 2 1 1 2 2 2 2 2 1 1 3 1 1 1 5 +1 1 2 1 1 2 2 2 2 2 2 1 3 1 1 1 5 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 2 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 2 1 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 1 1 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 2 2 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 1 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +1 1 2 1 1 2 2 2 2 2 1 1 3 2 1 1 5 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 1 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 1 2 1 +2 1 2 2 1 2 2 1 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 2 2 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 2 2 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 2 2 1 +1 1 2 1 1 2 1 2 2 2 1 1 3 1 1 1 5 +1 1 2 1 1 1 1 1 2 2 1 1 3 2 1 2 3 +1 1 2 1 1 1 2 2 2 2 1 1 3 2 1 1 3 +2 1 1 2 1 1 1 2 2 2 1 1 3 2 1 1 1 +2 1 1 2 1 1 2 2 2 2 1 1 3 2 1 2 1 +1 1 2 1 1 2 2 1 1 1 1 1 4 1 1 1 7 +1 1 2 1 1 2 2 1 1 1 1 1 5 1 1 1 7 +1 1 2 1 1 1 1 1 1 2 1 1 5 1 1 1 6 +1 1 2 1 2 1 1 1 1 2 1 1 5 1 1 1 6 +2 1 2 1 2 1 1 1 1 2 2 1 5 1 2 1 6 +2 1 2 1 2 1 1 1 1 2 1 1 5 1 1 1 6 +1 1 2 1 2 1 2 1 1 2 1 1 5 1 1 1 6 +1 1 2 1 1 2 2 1 1 1 1 1 5 1 1 1 7 +2 1 2 1 2 1 1 1 1 2 1 1 5 1 1 1 6 +1 1 2 1 1 1 1 1 1 2 1 1 5 1 1 1 6 +2 1 2 1 2 1 1 1 1 2 2 1 5 1 1 1 6 +1 1 2 1 1 2 2 1 1 1 1 1 6 1 1 2 7 +1 1 1 1 1 1 2 1 1 2 2 1 6 2 1 1 7 + diff --git a/sourcecodes/data/old/examplezoo/fSfgraphviz.txt b/sourcecodes/data/old/examplezoo/fSfgraphviz.txt new file mode 100644 index 00000000..701801c6 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfgraphviz.txt @@ -0,0 +1,61 @@ +digraph G { +size="10,10"; ratio = fill; +node [shape=square,width=1.5]; +feathers -> type; +eggs -> hair; +eggs -> feathers; +eggs -> toothed; +eggs -> backbone; +eggs -> breathes; +eggs -> legs; +eggs -> tail; +eggs -> catsize; +milk -> hair; +milk -> feathers; +milk -> toothed; +milk -> backbone; +milk -> breathes; +milk -> legs; +milk -> tail; +milk -> catsize; +milk -> type; +airborne -> eggs; +airborne -> milk; +airborne -> backbone; +airborne -> breathes; +airborne -> catsize; +aquatic -> eggs; +aquatic -> milk; +aquatic -> breathes; +aquatic -> fins; +backbone -> hair; +backbone -> feathers; +backbone -> toothed; +backbone -> fins; +backbone -> legs; +backbone -> tail; +backbone -> type; +breathes -> hair; +breathes -> toothed; +breathes -> backbone; +breathes -> fins; +breathes -> legs; +breathes -> catsize; +breathes -> type; +venomous -> hair; +venomous -> feathers; +venomous -> eggs; +venomous -> milk; +venomous -> toothed; +venomous -> backbone; +venomous -> breathes; +venomous -> fins; +venomous -> legs; +venomous -> tail; +venomous -> catsize; +legs -> type; +domestic -> eggs; +domestic -> milk; +domestic -> fins; +domestic -> tail; +} \ No newline at end of file diff --git a/sourcecodes/data/old/examplezoo/fSfk.txt b/sourcecodes/data/old/examplezoo/fSfk.txt new file mode 100644 index 00000000..f599e28b --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfk.txt @@ -0,0 +1 @@ +10 diff --git a/sourcecodes/data/old/examplezoo/fSfmap.txt b/sourcecodes/data/old/examplezoo/fSfmap.txt new file mode 100644 index 00000000..4a123441 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfmap.txt @@ -0,0 +1,17 @@ +hair 2 0.496921 1.425743 +feathers 2 0.400495 1.198020 +eggs 2 0.495325 1.584158 +milk 2 0.493522 1.405941 +airborne 2 0.427750 1.237624 +aquatic 2 0.481335 1.356436 +predator 2 0.499505 1.554455 +toothed 2 0.491512 1.603960 +backbone 2 0.384605 1.821782 +breathes 2 0.407844 1.792079 +venomous 2 0.271410 1.079208 +fins 6 0.376013 1.168317 +legs 2 1.253194 2.544554 +tail 2 0.439397 1.742574 +domestic 2 0.336552 1.128713 +catsize 7 0.498314 1.435644 +type 2 2.102709 2.831683 diff --git a/sourcecodes/data/old/examplezoo/fSfmapdata.txt b/sourcecodes/data/old/examplezoo/fSfmapdata.txt new file mode 100644 index 00000000..19d91997 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfmapdata.txt @@ -0,0 +1 @@ +domestic venomous predator aquatic airborne milk eggs breathes catsize backbone tail legs fins toothed feathers type hair diff --git a/sourcecodes/data/old/examplezoo/fSfname.txt b/sourcecodes/data/old/examplezoo/fSfname.txt new file mode 100644 index 00000000..c68267c4 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfname.txt @@ -0,0 +1 @@ +hair feathers eggs milk airborne aquatic predator toothed backbone breathes venomous fins legs tail domestic catsize type diff --git a/sourcecodes/data/old/examplezoo/fSfnet_figure.txt b/sourcecodes/data/old/examplezoo/fSfnet_figure.txt new file mode 100644 index 00000000..0c8f9428 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfnet_figure.txt @@ -0,0 +1,130 @@ +17 +1800 1200 +domestic 43 0 +venomous 343 0 +predator 643 0 +aquatic 943 0 +airborne 1243 0 +milk 523 171 +eggs 1123 171 +breathes 643 343 +catsize 523 514 +backbone 1123 514 +tail 0 686 +legs 257 686 +fins 514 686 +toothed 771 686 +feathers 1029 686 +type 823 857 +hair 1286 686 +domestic 2 +250 150 +0 +4 6 7 11 13 +1 0.8672 +2 0.1328 +venomous 2 +250 150 +0 +11 6 7 8 9 10 11 12 13 14 15 17 +1 0.8860 +2 0.1140 +predator 2 +250 150 +0 +0 +1 0.4455 +2 0.5545 +aquatic 2 +250 150 +0 +4 6 7 8 13 +1 0.6726 +2 0.3274 +airborne 2 +250 150 +0 +5 6 7 8 9 10 +1 0.8149 +2 0.1851 +milk 2 +250 150 +4 1 2 4 5 +9 8 9 10 11 12 14 15 16 17 +1 0.4703 +2 0.5297 +eggs 2 +250 150 +4 1 2 4 5 +8 8 9 10 11 12 14 15 17 +1 0.4962 +2 0.5038 +breathes 2 +250 150 +5 2 4 5 6 7 +7 9 10 12 13 14 16 17 +1 0.1666 +2 0.8334 +catsize 2 +250 150 +5 2 5 6 7 8 +0 +1 0.4789 +2 0.5211 +backbone 2 +250 150 +5 2 5 6 7 8 +7 11 12 13 14 15 16 17 +1 0.1743 +2 0.8257 +tail 2 +250 150 +5 1 2 6 7 10 +0 +1 0.2426 +2 0.7574 +legs 6 +250 150 +5 2 6 7 8 10 +1 16 +1 0.1827 +2 0.2108 +3 0.4747 +4 0.0111 +5 0.0799 +6 0.0409 +fins 2 +250 150 +5 1 2 4 8 10 +0 +1 0.8751 +2 0.1249 +toothed 2 +250 150 +5 2 6 7 8 10 +0 +1 0.3799 +2 0.6201 +feathers 2 +250 150 +4 2 6 7 10 +1 16 +1 0.8693 +2 0.1307 +type 7 +250 150 +5 6 8 10 12 15 +0 +1 0.5297 +2 0.1307 +3 0.0476 +4 0.0854 +5 0.0323 +6 0.0578 +7 0.1165 +hair 2 +250 150 +5 2 6 7 8 10 +0 +1 0.4597 +2 0.5403 diff --git a/sourcecodes/data/old/examplezoo/fSfnnode.txt b/sourcecodes/data/old/examplezoo/fSfnnode.txt new file mode 100644 index 00000000..98d9bcb7 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfnnode.txt @@ -0,0 +1 @@ +17 diff --git a/sourcecodes/data/old/examplezoo/fSfnrows.txt b/sourcecodes/data/old/examplezoo/fSfnrows.txt new file mode 100644 index 00000000..257e5632 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfnrows.txt @@ -0,0 +1 @@ +102 diff --git a/sourcecodes/data/old/examplezoo/fSfparent.txt b/sourcecodes/data/old/examplezoo/fSfparent.txt new file mode 100644 index 00000000..7ed6ff82 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfparent.txt @@ -0,0 +1 @@ +5 diff --git a/sourcecodes/data/old/examplezoo/fSfstructure_input.txt b/sourcecodes/data/old/examplezoo/fSfstructure_input.txt new file mode 100644 index 00000000..c49d600b --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfstructure_input.txt @@ -0,0 +1,18 @@ +hair feathers eggs milk airborne aquatic predator toothed backbone breathes venomous fins legs tail domestic catsize type +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +1 1 0 0 0 0 0 1 1 1 0 0 1 1 0 1 0 +1 1 0 0 0 0 0 1 1 1 0 0 1 1 0 1 1 +0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 +0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +1 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 +1 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 1 +1 1 1 1 0 0 0 1 1 1 0 1 1 1 0 1 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 diff --git a/sourcecodes/data/old/examplezoo/fSfstructure_input_temp.txt b/sourcecodes/data/old/examplezoo/fSfstructure_input_temp.txt new file mode 100644 index 00000000..8910aaee --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfstructure_input_temp.txt @@ -0,0 +1,18 @@ +hair feathers eggs milk airborne aquatic predator toothed backbone breathes venomous fins legs tail domestic catsize type +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 +1.000000 0.800011 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 1.000000 0.000000 0.000000 1.000000 1.000000 0.000000 1.000000 0.000000 +1.000000 1.000000 0.500003 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 1.000000 0.000000 0.000000 1.000000 1.000000 0.000000 1.000000 1.000000 +0.000000 0.400004 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 +0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 1.000000 0.000000 0.000000 1.000000 +0.800018 0.799985 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 1.000000 1.000000 +1.000000 1.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 1.000000 0.000000 1.000000 1.000000 1.000000 0.000000 1.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.199982 0.000000 0.900015 0.900010 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 +0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 diff --git a/sourcecodes/data/old/examplezoo/fSfstructure_old.txt b/sourcecodes/data/old/examplezoo/fSfstructure_old.txt new file mode 100644 index 00000000..bf00f5d5 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfstructure_old.txt @@ -0,0 +1,16 @@ +feathers 0.8693 0.1307 +type 0.5297 0.1307 0.0476 0.0854 0.0323 0.0578 0.1165 +eggs 0.4962 0.5038 +hair 0.4597 0.5403 +toothed 0.3799 0.6201 +backbone 0.1743 0.8257 +breathes 0.1666 0.8334 +legs 0.1827 0.2108 0.4747 0.0111 0.0799 0.0409 +tail 0.2426 0.7574 +catsize 0.4789 0.5211 +milk 0.4703 0.5297 +airborne 0.8149 0.1851 +aquatic 0.6726 0.3274 +fins 0.8751 0.1249 +venomous 0.8860 0.1140 +domestic 0.8672 0.1328 diff --git a/sourcecodes/data/old/examplezoo/fSfthr.txt b/sourcecodes/data/old/examplezoo/fSfthr.txt new file mode 100644 index 00000000..aec258df --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfthr.txt @@ -0,0 +1 @@ +0.8 diff --git a/sourcecodes/data/old/examplezoo/fSftier.txt b/sourcecodes/data/old/examplezoo/fSftier.txt new file mode 100644 index 00000000..ca417b31 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSftier.txt @@ -0,0 +1 @@ +4,Tier1,5,aquatic,airborne,venomous,predator,domestic,Tier2,4,eggs,milk,backbone,breathes,Tier3,7,catsize,tail,toothed,hair,feathers,fins,legs,Tier4,1,type, \ No newline at end of file diff --git a/sourcecodes/data/old/examplezoo/fSftype.txt b/sourcecodes/data/old/examplezoo/fSftype.txt new file mode 100644 index 00000000..41c0f73e --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSftype.txt @@ -0,0 +1,2 @@ +hair feathers eggs milk airborne aquatic predator toothed backbone breathes venomous fins legs tail domestic catsize type +2 2 2 2 2 2 2 2 2 2 2 2 6 2 2 2 7 diff --git a/sourcecodes/data/old/examplezoo/fSfwhite.txt b/sourcecodes/data/old/examplezoo/fSfwhite.txt new file mode 100644 index 00000000..83e81b8b --- /dev/null +++ b/sourcecodes/data/old/examplezoo/fSfwhite.txt @@ -0,0 +1 @@ +From To diff --git a/sourcecodes/data/old/examplezoo/old/fSfrun_initialstructure.sh b/sourcecodes/data/old/examplezoo/old/fSfrun_initialstructure.sh new file mode 100644 index 00000000..f20a9a29 --- /dev/null +++ b/sourcecodes/data/old/examplezoo/old/fSfrun_initialstructure.sh @@ -0,0 +1,38 @@ +#!/bin/sh +# script for execution of deployed applications +# +# Sets up the MCR environment for the current $ARCH and executes +# the specified command. +# +exe_name=$0 +exe_dir=`dirname "$0"` +echo "------------------------------------------" +if [ "x$1" = "x" ]; then + echo Usage: + echo $0 \<deployedMCRroot\> args +else + echo Setting up environment variables + MCRROOT="$1" + echo --- + LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; + MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; + LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; + XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; + export LD_LIBRARY_PATH; + export XAPPLRESDIR; + echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; + shift 1 + args= + while [ $# -gt 0 ]; do + token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank + args="${args} ${token}" + shift + done + "${exe_dir}"/initialstructure fSf +fi +exit diff --git a/sourcecodes/data/old/examplezoo/standardized_data.txt b/sourcecodes/data/old/examplezoo/standardized_data.txt new file mode 100644 index 00000000..0975061e --- /dev/null +++ b/sourcecodes/data/old/examplezoo/standardized_data.txt @@ -0,0 +1,102 @@ +domestic venomous predator aquatic airborne milk eggs breathes catsize backbone tail legs fins toothed feathers type hair +1 1 2 2 1 1 2 1 1 2 2 1 2 2 1 4 1 +2 1 1 2 1 1 2 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