diff options
| -rw-r--r-- | info_files/BNW_file_overview.txt | 11 |
1 files changed, 8 insertions, 3 deletions
diff --git a/info_files/BNW_file_overview.txt b/info_files/BNW_file_overview.txt index ad9849ff..1c467fba 100644 --- a/info_files/BNW_file_overview.txt +++ b/info_files/BNW_file_overview.txt @@ -12,7 +12,7 @@ c) plotly: The files that need plotly are: cv_plotly.py, kfold_plotly.py, and ts_plotly.py BNW is currently located at /var/www/html/compbio/BNW_x.xx -(The current development version is BNW_1.21). +(The current development version is BNW_1.22). The main BNW directory contains two basic files (index.html and home.php) and two directories. A couple of lines in home.php should be modified/updated to point to the correct BNW directory. @@ -47,6 +47,9 @@ home_upload.php: Used in uploading a data file and a structure file when the str layout_example.php: Main php file for displaying/making predictions with network using example data. layout.php: Main php file for displaying/making predictions with network using user uploaded data. net_structure.php: Used in uploading structure file when the network structure is known. +layout_svg_wt.php: Initial display of network structure with edge weights. +layout_svg_no.php: Initial display of network structure without edge weights. +layout_cyto.php: Network visualization that can be used to modify the network structure. upload_structure_file.php: Used in uploading structure file when the network structure is known. faq.php getting_started.php @@ -77,6 +80,8 @@ js-graph-it.css js-graph-it.js my_new_style.css sf-homepage.css +graph-creator.css +graph-creator.js e) PHP files that support layout.php or layout_example.php: add_evd_example.php @@ -147,8 +152,8 @@ enter_netID.php modify_structure_learning.php, bn_after_upload_gom.php -Allows for modification of structure learning settings without having to upload the file again. -modify_edges.php, modify_edges_processing.php --Allows for the removal or addition of specific nodes to a network. +modified_network.php +-Allows for the direct modification of network structure using the Cytoscape layout. remove_variables.php, remove_variables_processing.php, remove_variables_processing_default.php -Allows for the removal of variables after uploading an input file. |