Separating Octave and php calculations

1 files changed, 0 insertions, 97 deletions

diff --git a/sourcecodes/graphviz_structure.php~ b/sourcecodes/graphviz_structure.php~
deleted file mode 100644
index 251c7557..00000000
--- a/sourcecodes/graphviz_structure.php~
+++ /dev/null
@@ -1,97 +0,0 @@
-<script language="JavaScript">
-<!--
-function calcHeight()
-{
-  //find the height of the internal page
-  var the_height=
-    document.getElementById('the_iframe').contentWindow.
-      document.body.scrollHeight;
-
-  //change the height of the iframe
-  document.getElementById('the_iframe').height=
-      the_height;
-}
-//-->
-</script>
-
-
-<?php 
-include("header_new.inc");
-$keyval=$_GET["My_key"];
-
-/////////////////////////////////structure matrix//////////////////////////////////////////////////////////
-
-
-$matfile="./data/".$keyval."structure_input.txt";
-$fout=fopen("./data/".$keyval."graphviz.txt","w");
-
-$matrix1=file_get_contents("$matfile");           
-$str_arrmat=array();
-$str_arrmat=explode("\n",$matrix1);
-$datamat=array();
-$data_cell=array(); 
-
-$dataname=array();
-$dataname=explode("\t",$str_arrmat[0]);
-$n=count($dataname);
-
-$initialstring="digraph G {\n"."size=\"10,10\";  ratio = fill;\n"."node [shape=square,width=1.5];\n";
-$endstring="}";
-fwrite($fout,"$initialstring");
-//fwrite($fouttemp,"$initialstring_temp");
-
-
-$g_file_name="./data/".$keyval."grviz_name_file.txt";
-$grviz_name_file=fopen($g_file_name,"w");
-
-for($i=0;$i<$n;$i++)
-{
-      $row_name=trim($dataname[$i]);  
-      fwrite($grviz_name_file,"$row_name\n");
-}
-
-for($i=1;$i<=$n;$i++)
-{
-         $ii=$i-1; 
-         $row_name=trim($dataname[$ii]);  
-
- 
-         $col_arr=explode("\t",$str_arrmat[$i]);
-        
-        
-	   for($j=0;$j<$n;$j++)
-	   {
-               $col_val=trim($col_arr[$j]);
-               if($col_val==1)
-               { 
-                  $col_name=trim($dataname[$j]);
-                  fprintf($fout,"%s -> %s;\n",$ii,$j);  
-                  //fprintf($fouttemp,"%s -> %s;\n",$row_name,$col_name);
-                 
-	        }
-          }
-          
-     
-} 
-fwrite($fout,"$endstring");   
-//fwrite($fouttemp,"$endstring");
- 
-//shell_exec('/usr/bin/dot -Tpng -o /var/www/html/compbio/BNW/graphviz.jpg /var/www/html/compbio/BNW/graphviztemp.txt');
-
-$file1="./data/".$keyval."run_initialstructure.sh";
-$initiallines=file_get_contents("./data/temp_shell_file_initial_structure");
-$all_lines="$initiallines"."$keyval\nfi\nexit";
-$fp = fopen($file1,"w"); 
-fwrite($fp, "$all_lines\n");
-fclose($fp);
-//prepare and execute shell script for matlab with a write lock
-//$cmd="./runmat.sh $keyval";
-//system($cmd);
-shell_exec('./runmat.sh '.$keyval);
-?>
-<script>
-window.open("layout.php?My_key=<?php print($keyval);?>",'_self',false);
-</script>
-
-
-