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| author | ziejd2 | 2021-03-16 11:23:09 -0500 |
|---|---|---|
| committer | ziejd2 | 2021-03-16 11:23:09 -0500 |
| commit | 9ba1e1cf346771581d02133b73f359be28b323e7 (patch) | |
| tree | 0ddcf30ffc45223a8395351abd8bd8ad686bc7f1 /sourcecodes/data/example_time_series | |
| parent | 2d7446ac13cf47643f824130b9fd1c4efe6d2909 (diff) | |
| download | BNW-9ba1e1cf346771581d02133b73f359be28b323e7.tar.gz | |
Delete old example files
Diffstat (limited to 'sourcecodes/data/example_time_series')
24 files changed, 0 insertions, 2563 deletions
diff --git a/sourcecodes/data/example_time_series/TEbban.txt b/sourcecodes/data/example_time_series/TEbban.txt deleted file mode 100644 index 7b0aa551..00000000 --- a/sourcecodes/data/example_time_series/TEbban.txt +++ /dev/null @@ -1,73 +0,0 @@ -From To -TraitA_T1 Genotype -TraitB_T1 Genotype -TraitC_T1 Genotype -TraitA_T2 Genotype -TraitB_T2 Genotype -TraitC_T2 Genotype -TraitA_T3 Genotype -TraitB_T3 Genotype -TraitC_T3 Genotype -TraitA_T1 Genotype -TraitB_T1 Genotype -TraitC_T1 Genotype -TraitA_T2 TraitA_T1 -TraitA_T2 TraitB_T1 -TraitA_T2 TraitC_T1 -TraitB_T2 TraitA_T1 -TraitB_T2 TraitB_T1 -TraitB_T2 TraitC_T1 -TraitC_T2 TraitA_T1 -TraitC_T2 TraitB_T1 -TraitC_T2 TraitC_T1 -TraitA_T3 TraitA_T1 -TraitA_T3 TraitB_T1 -TraitA_T3 TraitC_T1 -TraitB_T3 TraitA_T1 -TraitB_T3 TraitB_T1 -TraitB_T3 TraitC_T1 -TraitC_T3 TraitA_T1 -TraitC_T3 TraitB_T1 -TraitC_T3 TraitC_T1 -TraitA_T2 Genotype -TraitB_T2 Genotype -TraitC_T2 Genotype -TraitA_T2 TraitA_T1 -TraitA_T2 TraitB_T1 -TraitA_T2 TraitC_T1 -TraitB_T2 TraitA_T1 -TraitB_T2 TraitB_T1 -TraitB_T2 TraitC_T1 -TraitC_T2 TraitA_T1 -TraitC_T2 TraitB_T1 -TraitC_T2 TraitC_T1 -TraitA_T3 TraitA_T2 -TraitA_T3 TraitB_T2 -TraitA_T3 TraitC_T2 -TraitB_T3 TraitA_T2 -TraitB_T3 TraitB_T2 -TraitB_T3 TraitC_T2 -TraitC_T3 TraitA_T2 -TraitC_T3 TraitB_T2 -TraitC_T3 TraitC_T2 -TraitA_T3 Genotype -TraitB_T3 Genotype -TraitC_T3 Genotype -TraitA_T3 TraitA_T1 -TraitA_T3 TraitB_T1 -TraitA_T3 TraitC_T1 -TraitB_T3 TraitA_T1 -TraitB_T3 TraitB_T1 -TraitB_T3 TraitC_T1 -TraitC_T3 TraitA_T1 -TraitC_T3 TraitB_T1 -TraitC_T3 TraitC_T1 -TraitA_T3 TraitA_T2 -TraitA_T3 TraitB_T2 -TraitA_T3 TraitC_T2 -TraitB_T3 TraitA_T2 -TraitB_T3 TraitB_T2 -TraitB_T3 TraitC_T2 -TraitC_T3 TraitA_T2 -TraitC_T3 TraitB_T2 -TraitC_T3 TraitC_T2 diff --git a/sourcecodes/data/example_time_series/TEbcontinuous_input.txt b/sourcecodes/data/example_time_series/TEbcontinuous_input.txt deleted file mode 100644 index 34b3b957..00000000 --- a/sourcecodes/data/example_time_series/TEbcontinuous_input.txt +++ /dev/null @@ -1,503 +0,0 @@ -Genotype TraitA_T1 TraitA_T2 TraitA_T3 TraitB_T1 TraitB_T2 TraitB_T3 TraitC_T1 TraitC_T2 TraitC_T3 -2 1 1 1 1 1 1 1 1 1 -1 1.4297 -0.13715 -0.33041 1.3972 -0.17802 1.0272 -1.322 0.0027715 0.85527 -1 2.0687 -2.5819 -0.71386 -0.25338 0.64604 -0.25402 -1.1947 0.60348 1.5977 -2 0.52771 0.19656 0.40967 0.039336 1.57 -0.036341 -1.6301 -0.15434 0.93397 -1 1.7929 -0.85399 -0.21102 0.36528 0.14997 -0.072283 0.25214 1.8044 1.4149 -1 -0.090929 -0.17288 -2.808 0.79192 -1.5175 -0.90041 0.39689 -0.18146 -0.55432 -1 0.86086 -0.049472 -0.82074 0.18954 0.51157 0.30995 -0.50952 -0.047852 0.25632 -1 0.37794 -0.49737 -1.5634 -0.61123 -1.6172 -0.025387 -0.50463 1.0061 -0.55909 -1 0.061886 -1.3173 -0.38674 0.66584 0.023432 -1.0821 0.14268 -0.21189 -0.60498 -1 0.96427 -1.6652 -0.61177 -0.295 0.12641 -1.6644 -1.0372 0.033566 1.3366 -2 0.16295 0.59047 0.7747 -0.32623 1.6996 -0.042892 -0.0034198 -0.30944 0.67765 -1 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0.42362 0.29853 -2 -0.53265 0.76969 1.0687 -0.79048 1.1924 0.53681 -0.38366 -1.1613 0.42401 -2 -1.4567 1.5038 1.7125 -1.9757 1.1075 -0.81071 0.29591 0.95985 -0.25161 -2 -2.7546 -0.21024 -0.041926 -0.24552 -0.6494 1.8608 0.86785 1.3512 -0.89236 -2 -0.54365 0.8237 -0.31856 -1.6296 0.73174 0.89915 0.91228 -0.66788 0.075926 -1 0.65472 -2.4675 -1.2267 -0.64632 -0.24147 0.5015 -0.24368 1.7307 -0.33117 -1 1.9061 -2.4358 -0.62051 -0.40306 0.35877 0.13681 0.5665 1.1077 0.90585 -1 -0.34786 -0.97138 -1.3607 0.74793 -2.3185 1.1517 0.35912 -0.22501 -1.7136 -1 1.509 -0.58183 -1.336 0.095131 -1.0719 -0.17454 -0.42425 0.21663 0.41672 -2 -1.1281 0.73596 1.3241 0.75066 -0.0098067 0.94941 -0.88569 0.96608 -0.58258 -1 2.0808 -1.2665 -0.27892 0.034005 1.5957 0.34276 -1.3939 0.20516 1.0361 -2 -0.27208 1.3514 0.78429 0.54442 1.2344 -1.0745 0.28837 -0.84074 -0.20416 -1 2.5732 -1.8429 0.35018 0.47113 -0.22532 -1.779 1.5326 -1.0015 1.0285 -1 1.524 -2.2514 -1.7375 -0.45648 1.0921 -1.1141 1.436 0.99093 1.3581 -1 0.60324 -0.46804 -0.11489 -2.454 -2.7665 0.61676 -1.5213 -1.192 -1.4163 -2 0.29712 1.188 0.57954 1.3259 0.95488 -0.70707 0.067457 0.47216 1.0369 -2 -0.97992 0.019053 1.3311 -0.33347 0.2814 -1.2616 0.90909 -1.0725 -0.62617 -2 -0.9056 0.73973 0.35093 -2.111 -0.50769 1.2491 0.64846 -1.0716 -0.35201 -1 1.3209 1.9154 -0.56509 0.70008 -1.6874 -0.92485 1.2406 1.7231 0.39622 -2 0.10632 0.88089 1.1544 0.27737 2.4332 -0.063819 -0.084136 -0.58305 1.1337 -1 0.7003 -1.4112 0.77725 0.95921 -1.239 -2.6684 -0.48008 -0.92359 -0.94882 -2 -2.0912 0.21124 1.0428 1.3279 -0.6659 -0.89398 0.5482 -0.029518 -1.2925 -2 -1.1484 2.2537 1.3423 -0.20816 0.31427 1.3603 1.6596 -0.49629 -0.63146 -1 1.2996 -2.8499 -0.97843 0.57176 -1.0424 -0.30734 -1.7632 -0.64856 -0.28028 -1 2.4392 -0.85404 -0.1262 -0.054289 0.1684 -1.3913 -0.4719 1.0582 1.4183 -2 -2.8357 2.1818 1.307 -1.1424 -0.97969 0.53689 0.33598 -0.11592 -2.0398 -2 -3.381 0.65778 0.8815 0.35115 -1.0556 -0.15942 -0.15958 0.57712 -2.8992 -1 1.9169 -0.15977 -1.1239 0.80773 -0.63434 -0.77712 -0.74684 0.97499 0.8461 -1 1.3703 -1.0164 0.45114 0.073799 1.259 0.40628 -0.11775 0.14354 2.0331 -2 -0.57067 -0.26266 0.56169 0.65535 0.78349 -0.66788 -0.41928 -0.77901 -0.27518 -1 -0.31373 -3.348 0.66363 -0.88205 -0.69595 1.0783 -1.9735 1.7579 -0.011735 - diff --git a/sourcecodes/data/example_time_series/TEbgraphviz.txt b/sourcecodes/data/example_time_series/TEbgraphviz.txt deleted file mode 100644 index d8bbfe4b..00000000 --- a/sourcecodes/data/example_time_series/TEbgraphviz.txt +++ /dev/null @@ -1,11 +0,0 @@ -digraph G { -size="10,10"; ratio = fill; -node [shape=square,width=1.5]; -Genotype -> TraitA_T1; -Genotype -> TraitA_T2; -Genotype -> TraitA_T3; -Genotype -> TraitB_T2; -TraitA_T1 -> TraitB_T2; -TraitA_T1 -> TraitC_T3; -TraitB_T2 -> TraitC_T3; -} \ No newline at end of file diff --git a/sourcecodes/data/example_time_series/TEbk.txt b/sourcecodes/data/example_time_series/TEbk.txt deleted file mode 100644 index 29d6383b..00000000 --- a/sourcecodes/data/example_time_series/TEbk.txt +++ /dev/null @@ -1 +0,0 @@ -100 diff --git a/sourcecodes/data/example_time_series/TEbmap.txt b/sourcecodes/data/example_time_series/TEbmap.txt deleted file mode 100644 index 20f9b470..00000000 --- a/sourcecodes/data/example_time_series/TEbmap.txt +++ /dev/null @@ -1,10 +0,0 @@ -Genotype 0.499053 1.462000 -TraitA_T1 1.306059 0.037189 -TraitA_T2 1.304164 -0.061147 -TraitA_T3 1.174305 -0.083449 -TraitB_T1 0.929161 -0.056347 -TraitB_T2 1.021691 -0.045299 -TraitB_T3 0.940946 0.012204 -TraitC_T1 0.907725 -0.001607 -TraitC_T2 0.923711 0.091657 -TraitC_T3 1.015189 0.017718 diff --git a/sourcecodes/data/example_time_series/TEbmapdata.txt b/sourcecodes/data/example_time_series/TEbmapdata.txt deleted file mode 100644 index 7e9af6ce..00000000 --- a/sourcecodes/data/example_time_series/TEbmapdata.txt +++ /dev/null @@ -1 +0,0 @@ -TraitC_T2 TraitC_T1 TraitB_T3 TraitB_T1 Genotype TraitA_T3 TraitA_T2 TraitA_T1 TraitB_T2 TraitC_T3 diff --git a/sourcecodes/data/example_time_series/TEbname.txt b/sourcecodes/data/example_time_series/TEbname.txt deleted file mode 100644 index 69919d0f..00000000 --- a/sourcecodes/data/example_time_series/TEbname.txt +++ /dev/null @@ -1 +0,0 @@ -Genotype TraitA_T1 TraitA_T2 TraitA_T3 TraitB_T1 TraitB_T2 TraitB_T3 TraitC_T1 TraitC_T2 TraitC_T3 diff --git a/sourcecodes/data/example_time_series/TEbnet_figure.txt b/sourcecodes/data/example_time_series/TEbnet_figure.txt deleted file mode 100644 index 1cceadd2..00000000 --- a/sourcecodes/data/example_time_series/TEbnet_figure.txt +++ /dev/null @@ -1,963 +0,0 @@ -10 -1500 1200 -TraitC_T2 0 0 -TraitC_T1 250 0 -TraitB_T3 500 0 -TraitB_T1 750 0 -Genotype 1000 0 -TraitA_T3 275 240 -TraitA_T2 650 240 -TraitA_T1 1025 240 -TraitB_T2 500 480 -TraitC_T3 650 720 -TraitC_T2 1 -250 150 -0 -0 --3.6677 0.0001 --3.5949 0.0002 --3.5222 0.0002 --3.4494 0.0003 --3.3767 0.0004 --3.3039 0.0005 --3.2311 0.0007 --3.1584 0.0009 --3.0856 0.0012 --3.0129 0.0015 --2.9401 0.0020 --2.8673 0.0025 --2.7946 0.0032 --2.7218 0.0041 --2.6490 0.0052 --2.5763 0.0065 --2.5035 0.0081 --2.4308 0.0101 --2.3580 0.0124 --2.2852 0.0152 --2.2125 0.0185 --2.1397 0.0224 --2.0669 0.0269 --1.9942 0.0322 --1.9214 0.0382 --1.8487 0.0451 --1.7759 0.0529 --1.7031 0.0617 --1.6304 0.0716 --1.5576 0.0824 --1.4848 0.0944 --1.4121 0.1074 --1.3393 0.1215 --1.2666 0.1366 --1.1938 0.1526 --1.1210 0.1695 --1.0483 0.1871 --0.9755 0.2052 --0.9027 0.2238 --0.8300 0.2425 --0.7572 0.2612 --0.6845 0.2796 --0.6117 0.2975 --0.5389 0.3147 --0.4662 0.3308 --0.3934 0.3456 --0.3206 0.3588 --0.2479 0.3703 --0.1751 0.3799 --0.1024 0.3873 --0.0296 0.3924 -0.0432 0.3952 -0.1159 0.3956 -0.1887 0.3936 -0.2614 0.3892 -0.3342 0.3826 -0.4070 0.3737 -0.4797 0.3629 -0.5525 0.3502 -0.6253 0.3358 -0.6980 0.3202 -0.7708 0.3033 -0.8435 0.2857 -0.9163 0.2674 -0.9891 0.2487 -1.0618 0.2300 -1.1346 0.2114 -1.2074 0.1930 -1.2801 0.1753 -1.3529 0.1581 -1.4256 0.1418 -1.4984 0.1264 -1.5712 0.1120 -1.6439 0.0986 -1.7167 0.0863 -1.7895 0.0751 -1.8622 0.0649 -1.9350 0.0558 -2.0077 0.0476 -2.0805 0.0404 -2.1533 0.0341 -2.2260 0.0286 -2.2988 0.0238 -2.3716 0.0197 -2.4443 0.0163 -2.5171 0.0133 -2.5898 0.0108 -2.6626 0.0087 -2.7354 0.0070 -2.8081 0.0056 -2.8809 0.0045 -2.9537 0.0035 -3.0264 0.0028 -3.0992 0.0021 -3.1719 0.0017 -3.2447 0.0013 -3.3175 0.0010 -3.3902 0.0007 -3.4630 0.0006 -3.5357 0.0004 -3.6085 0.0003 -TraitC_T1 1 -250 150 -0 -0 --3.4884 0.0003 --3.4129 0.0004 --3.3374 0.0005 --3.2619 0.0007 --3.1864 0.0009 --3.1109 0.0012 --3.0354 0.0016 --2.9599 0.0021 --2.8844 0.0028 --2.8089 0.0036 --2.7334 0.0046 --2.6579 0.0059 --2.5824 0.0074 --2.5069 0.0093 --2.4314 0.0116 --2.3559 0.0144 --2.2804 0.0178 --2.2049 0.0218 --2.1294 0.0265 --2.0539 0.0320 --1.9784 0.0384 --1.9029 0.0457 --1.8274 0.0540 --1.7519 0.0635 --1.6764 0.0741 --1.6009 0.0859 --1.5254 0.0989 --1.4499 0.1131 --1.3744 0.1284 --1.2989 0.1448 --1.2234 0.1623 --1.1479 0.1806 --1.0724 0.1995 --0.9969 0.2190 --0.9214 0.2388 --0.8459 0.2585 --0.7704 0.2781 --0.6949 0.2970 --0.6194 0.3151 --0.5439 0.3320 --0.4684 0.3475 --0.3929 0.3612 --0.3174 0.3729 --0.2419 0.3824 --0.1664 0.3894 --0.0909 0.3939 --0.0154 0.3957 -0.0601 0.3949 -0.1356 0.3914 -0.2111 0.3852 -0.2866 0.3766 -0.3620 0.3657 -0.4375 0.3527 -0.5130 0.3379 -0.5885 0.3215 -0.6640 0.3038 -0.7395 0.2851 -0.8150 0.2657 -0.8905 0.2460 -0.9660 0.2262 -1.0415 0.2066 -1.1170 0.1874 -1.1925 0.1689 -1.2680 0.1511 -1.3435 0.1343 -1.4190 0.1186 -1.4945 0.1040 -1.5700 0.0905 -1.6455 0.0783 -1.7210 0.0673 -1.7965 0.0574 -1.8720 0.0486 -1.9475 0.0409 -2.0230 0.0342 -2.0985 0.0284 -2.1740 0.0234 -2.2495 0.0192 -2.3250 0.0156 -2.4005 0.0126 -2.4760 0.0101 -2.5515 0.0081 -2.6270 0.0064 -2.7025 0.0050 -2.7780 0.0039 -2.8535 0.0030 -2.9290 0.0023 -3.0045 0.0018 -3.0800 0.0014 -3.1555 0.0010 -3.2310 0.0008 -3.3065 0.0006 -3.3820 0.0004 -3.4575 0.0003 -3.5330 0.0002 -3.6085 0.0002 -3.6840 0.0001 -3.7595 0.0001 -3.8350 0.0001 -3.9105 0.0000 -3.9860 0.0000 -4.0615 0.0000 -TraitB_T3 1 -250 150 -0 -0 --3.6093 0.0003 --3.5383 0.0004 --3.4673 0.0005 --3.3963 0.0006 --3.3252 0.0008 --3.2542 0.0011 --3.1832 0.0014 --3.1122 0.0017 --3.0411 0.0022 --2.9701 0.0028 --2.8991 0.0036 --2.8281 0.0045 --2.7570 0.0056 --2.6860 0.0069 --2.6150 0.0085 --2.5440 0.0105 --2.4729 0.0128 --2.4019 0.0155 --2.3309 0.0187 --2.2599 0.0225 --2.1888 0.0268 --2.1178 0.0318 --2.0468 0.0375 --1.9758 0.0440 --1.9047 0.0513 --1.8337 0.0596 --1.7627 0.0687 --1.6917 0.0788 --1.6206 0.0899 --1.5496 0.1020 --1.4786 0.1151 --1.4076 0.1291 --1.3365 0.1440 --1.2655 0.1597 --1.1945 0.1762 --1.1235 0.1933 --1.0524 0.2108 --0.9814 0.2286 --0.9104 0.2466 --0.8394 0.2645 --0.7683 0.2821 --0.6973 0.2992 --0.6263 0.3155 --0.5553 0.3309 --0.4842 0.3451 --0.4132 0.3579 --0.3422 0.3691 --0.2712 0.3785 --0.2001 0.3860 --0.1291 0.3914 --0.0581 0.3947 -0.0129 0.3958 -0.0839 0.3946 -0.1550 0.3913 -0.2260 0.3858 -0.2970 0.3783 -0.3680 0.3689 -0.4391 0.3577 -0.5101 0.3448 -0.5811 0.3306 -0.6521 0.3152 -0.7232 0.2988 -0.7942 0.2817 -0.8652 0.2641 -0.9362 0.2462 -1.0073 0.2283 -1.0783 0.2104 -1.1493 0.1929 -1.2203 0.1758 -1.2914 0.1594 -1.3624 0.1437 -1.4334 0.1288 -1.5044 0.1148 -1.5755 0.1018 -1.6465 0.0897 -1.7175 0.0786 -1.7885 0.0685 -1.8596 0.0594 -1.9306 0.0512 -2.0016 0.0439 -2.0726 0.0374 -2.1437 0.0317 -2.2147 0.0267 -2.2857 0.0224 -2.3567 0.0186 -2.4278 0.0155 -2.4988 0.0127 -2.5698 0.0104 -2.6408 0.0085 -2.7119 0.0069 -2.7829 0.0056 -2.8539 0.0044 -2.9249 0.0035 -2.9960 0.0028 -3.0670 0.0022 -3.1380 0.0017 -3.2090 0.0014 -3.2801 0.0010 -3.3511 0.0008 -3.4221 0.0006 -3.4931 0.0005 -TraitB_T1 1 -250 150 -0 -0 --3.5085 0.0004 --3.4347 0.0006 --3.3609 0.0008 --3.2872 0.0010 --3.2134 0.0013 --3.1397 0.0018 --3.0659 0.0023 --2.9921 0.0029 --2.9184 0.0037 --2.8446 0.0047 --2.7709 0.0059 --2.6971 0.0074 --2.6234 0.0093 --2.5496 0.0114 --2.4758 0.0141 --2.4021 0.0172 --2.3283 0.0209 --2.2546 0.0252 --2.1808 0.0302 --2.1070 0.0360 --2.0333 0.0427 --1.9595 0.0502 --1.8858 0.0587 --1.8120 0.0683 --1.7382 0.0789 --1.6645 0.0906 --1.5907 0.1034 --1.5170 0.1173 --1.4432 0.1322 --1.3694 0.1481 --1.2957 0.1649 --1.2219 0.1824 --1.1482 0.2006 --1.0744 0.2192 --1.0006 0.2381 --0.9269 0.2570 --0.8531 0.2756 --0.7794 0.2938 --0.7056 0.3112 --0.6319 0.3277 --0.5581 0.3429 --0.4843 0.3565 --0.4106 0.3685 --0.3368 0.3784 --0.2631 0.3863 --0.1893 0.3918 --0.1155 0.3950 --0.0418 0.3957 -0.0320 0.3940 -0.1057 0.3899 -0.1795 0.3834 -0.2533 0.3747 -0.3270 0.3640 -0.4008 0.3513 -0.4745 0.3370 -0.5483 0.3213 -0.6221 0.3045 -0.6958 0.2867 -0.7696 0.2683 -0.8433 0.2495 -0.9171 0.2306 -0.9909 0.2118 -1.0646 0.1934 -1.1384 0.1754 -1.2121 0.1582 -1.2859 0.1417 -1.3596 0.1262 -1.4334 0.1117 -1.5072 0.0982 -1.5809 0.0859 -1.6547 0.0746 -1.7284 0.0644 -1.8022 0.0553 -1.8760 0.0471 -1.9497 0.0399 -2.0235 0.0336 -2.0972 0.0281 -2.1710 0.0234 -2.2448 0.0194 -2.3185 0.0159 -2.3923 0.0130 -2.4660 0.0105 -2.5398 0.0085 -2.6136 0.0068 -2.6873 0.0054 -2.7611 0.0043 -2.8348 0.0034 -2.9086 0.0026 -2.9824 0.0020 -3.0561 0.0016 -3.1299 0.0012 -3.2036 0.0009 -3.2774 0.0007 -3.3511 0.0005 -3.4249 0.0004 -3.4987 0.0003 -3.5724 0.0002 -3.6462 0.0002 -3.7199 0.0001 -3.7937 0.0001 -3.8675 0.0001 -Genotype 2 -250 150 -0 -4 6 7 8 9 -1 0.5380 -2 0.4620 -TraitA_T3 1 -250 150 -1 5 -0 --4.3220 0.0007 --4.2395 0.0008 --4.1570 0.0011 --4.0746 0.0013 --3.9921 0.0017 --3.9096 0.0021 --3.8271 0.0027 --3.7446 0.0033 --3.6621 0.0041 --3.5797 0.0050 --3.4972 0.0062 --3.4147 0.0075 --3.3322 0.0092 --3.2497 0.0111 --3.1673 0.0133 --3.0848 0.0159 --3.0023 0.0189 --2.9198 0.0224 --2.8373 0.0264 --2.7548 0.0310 --2.6724 0.0362 --2.5899 0.0421 --2.5074 0.0486 --2.4249 0.0559 --2.3424 0.0641 --2.2600 0.0730 --2.1775 0.0828 --2.0950 0.0934 --2.0125 0.1049 --1.9300 0.1172 --1.8475 0.1304 --1.7651 0.1443 --1.6826 0.1589 --1.6001 0.1742 --1.5176 0.1900 --1.4351 0.2062 --1.3526 0.2227 --1.2702 0.2394 --1.1877 0.2561 --1.1052 0.2727 --1.0227 0.2889 --0.9402 0.3046 --0.8578 0.3195 --0.7753 0.3336 --0.6928 0.3467 --0.6103 0.3585 --0.5278 0.3688 --0.4453 0.3777 --0.3629 0.3849 --0.2804 0.3903 --0.1979 0.3939 --0.1154 0.3956 --0.0329 0.3954 -0.0495 0.3933 -0.1320 0.3893 -0.2145 0.3834 -0.2970 0.3759 -0.3795 0.3666 -0.4620 0.3559 -0.5444 0.3438 -0.6269 0.3306 -0.7094 0.3162 -0.7919 0.3011 -0.8744 0.2853 -0.9568 0.2690 -1.0393 0.2524 -1.1218 0.2357 -1.2043 0.2190 -1.2868 0.2025 -1.3693 0.1864 -1.4517 0.1707 -1.5342 0.1556 -1.6167 0.1411 -1.6992 0.1273 -1.7817 0.1144 -1.8642 0.1022 -1.9466 0.0909 -2.0291 0.0805 -2.1116 0.0709 -2.1941 0.0622 -2.2766 0.0542 -2.3590 0.0471 -2.4415 0.0407 -2.5240 0.0350 -2.6065 0.0299 -2.6890 0.0255 -2.7715 0.0216 -2.8539 0.0182 -2.9364 0.0153 -3.0189 0.0128 -3.1014 0.0106 -3.1839 0.0088 -3.2663 0.0072 -3.3488 0.0059 -3.4313 0.0048 -3.5138 0.0039 -3.5963 0.0032 -3.6788 0.0025 -3.7612 0.0020 -3.8437 0.0016 -3.9262 0.0013 -TraitA_T2 1 -250 150 -1 5 -0 --4.7209 0.0007 --4.6314 0.0009 --4.5418 0.0012 --4.4523 0.0015 --4.3628 0.0019 --4.2733 0.0023 --4.1838 0.0029 --4.0943 0.0036 --4.0048 0.0044 --3.9153 0.0054 --3.8258 0.0066 --3.7362 0.0079 --3.6467 0.0096 --3.5572 0.0115 --3.4677 0.0138 --3.3782 0.0164 --3.2887 0.0194 --3.1992 0.0229 --3.1097 0.0269 --3.0201 0.0314 --2.9306 0.0365 --2.8411 0.0423 --2.7516 0.0487 --2.6621 0.0559 --2.5726 0.0638 --2.4831 0.0725 --2.3936 0.0820 --2.3041 0.0923 --2.2145 0.1035 --2.1250 0.1154 --2.0355 0.1281 --1.9460 0.1416 --1.8565 0.1558 --1.7670 0.1705 --1.6775 0.1859 --1.5880 0.2016 --1.4985 0.2177 --1.4089 0.2340 --1.3194 0.2503 --1.2299 0.2666 --1.1404 0.2825 --1.0509 0.2981 --0.9614 0.3131 --0.8719 0.3272 --0.7824 0.3405 --0.6929 0.3526 --0.6033 0.3635 --0.5138 0.3730 --0.4243 0.3810 --0.3348 0.3873 --0.2453 0.3919 --0.1558 0.3948 --0.0663 0.3958 -0.0232 0.3950 -0.1127 0.3923 -0.2023 0.3879 -0.2918 0.3818 -0.3813 0.3740 -0.4708 0.3647 -0.5603 0.3539 -0.6498 0.3419 -0.7393 0.3288 -0.8288 0.3147 -0.9183 0.2998 -1.0079 0.2844 -1.0974 0.2684 -1.1869 0.2522 -1.2764 0.2359 -1.3659 0.2196 -1.4554 0.2034 -1.5449 0.1876 -1.6344 0.1723 -1.7239 0.1574 -1.8135 0.1432 -1.9030 0.1296 -1.9925 0.1168 -2.0820 0.1048 -2.1715 0.0936 -2.2610 0.0832 -2.3505 0.0736 -2.4400 0.0648 -2.5295 0.0568 -2.6191 0.0495 -2.7086 0.0430 -2.7981 0.0372 -2.8876 0.0320 -2.9771 0.0274 -3.0666 0.0233 -3.1561 0.0198 -3.2456 0.0167 -3.3352 0.0141 -3.4247 0.0118 -3.5142 0.0098 -3.6037 0.0081 -3.6932 0.0067 -3.7827 0.0055 -3.8722 0.0045 -3.9617 0.0037 -4.0512 0.0030 -4.1408 0.0024 -4.2303 0.0019 -TraitA_T1 1 -250 150 -1 5 -2 9 10 --5.7657 0.0000 --5.6659 0.0000 --5.5661 0.0000 --5.4664 0.0001 --5.3666 0.0001 --5.2669 0.0001 --5.1671 0.0002 --5.0673 0.0002 --4.9676 0.0003 --4.8678 0.0004 --4.7681 0.0005 --4.6683 0.0007 --4.5685 0.0009 --4.4688 0.0011 --4.3690 0.0015 --4.2693 0.0019 --4.1695 0.0024 --4.0697 0.0030 --3.9700 0.0039 --3.8702 0.0048 --3.7705 0.0060 --3.6707 0.0075 --3.5709 0.0093 --3.4712 0.0114 --3.3714 0.0139 --3.2717 0.0168 --3.1719 0.0203 --3.0721 0.0243 --2.9724 0.0290 --2.8726 0.0344 --2.7729 0.0406 --2.6731 0.0475 --2.5733 0.0554 --2.4736 0.0642 --2.3738 0.0740 --2.2741 0.0848 --2.1743 0.0965 --2.0745 0.1093 --1.9748 0.1231 --1.8750 0.1378 --1.7753 0.1534 --1.6755 0.1698 --1.5757 0.1869 --1.4760 0.2044 --1.3762 0.2224 --1.2765 0.2406 --1.1767 0.2587 --1.0769 0.2767 --0.9772 0.2941 --0.8774 0.3109 --0.7776 0.3268 --0.6779 0.3415 --0.5781 0.3548 --0.4784 0.3666 --0.3786 0.3765 --0.2788 0.3845 --0.1791 0.3905 --0.0793 0.3942 -0.0204 0.3957 -0.1202 0.3950 -0.2200 0.3920 -0.3197 0.3868 -0.4195 0.3794 -0.5192 0.3701 -0.6190 0.3590 -0.7188 0.3461 -0.8185 0.3319 -0.9183 0.3164 -1.0180 0.2999 -1.1178 0.2826 -1.2176 0.2648 -1.3173 0.2467 -1.4171 0.2285 -1.5168 0.2105 -1.6166 0.1927 -1.7164 0.1755 -1.8161 0.1588 -1.9159 0.1430 -2.0156 0.1280 -2.1154 0.1139 -2.2152 0.1007 -2.3149 0.0886 -2.4147 0.0775 -2.5144 0.0674 -2.6142 0.0583 -2.7140 0.0501 -2.8137 0.0428 -2.9135 0.0364 -3.0132 0.0307 -3.1130 0.0258 -3.2128 0.0216 -3.3125 0.0179 -3.4123 0.0148 -3.5120 0.0122 -3.6118 0.0099 -3.7116 0.0081 -3.8113 0.0065 -3.9111 0.0052 -4.0108 0.0042 -4.1106 0.0033 -4.2104 0.0026 -TraitB_T2 1 -250 150 -2 5 8 -1 10 --3.7882 0.0006 --3.7109 0.0008 --3.6337 0.0010 --3.5564 0.0013 --3.4791 0.0017 --3.4019 0.0021 --3.3246 0.0027 --3.2473 0.0034 --3.1700 0.0043 --3.0928 0.0053 --3.0155 0.0066 --2.9382 0.0081 --2.8610 0.0100 --2.7837 0.0122 --2.7064 0.0148 --2.6292 0.0178 --2.5519 0.0214 --2.4746 0.0255 --2.3974 0.0302 --2.3201 0.0357 --2.2428 0.0419 --2.1656 0.0489 --2.0883 0.0568 --2.0110 0.0655 --1.9338 0.0752 --1.8565 0.0858 --1.7792 0.0975 --1.7020 0.1100 --1.6247 0.1235 --1.5474 0.1379 --1.4702 0.1532 --1.3929 0.1692 --1.3156 0.1858 --1.2384 0.2029 --1.1611 0.2204 --1.0838 0.2381 --1.0065 0.2557 --0.9293 0.2732 --0.8520 0.2902 --0.7747 0.3066 --0.6975 0.3222 --0.6202 0.3366 --0.5429 0.3498 --0.4657 0.3615 --0.3884 0.3715 --0.3111 0.3797 --0.2339 0.3859 --0.1566 0.3901 --0.0793 0.3921 --0.0021 0.3920 -0.0752 0.3897 -0.1525 0.3853 -0.2297 0.3788 -0.3070 0.3704 -0.3843 0.3602 -0.4615 0.3483 -0.5388 0.3350 -0.6161 0.3204 -0.6933 0.3047 -0.7706 0.2882 -0.8479 0.2711 -0.9251 0.2536 -1.0024 0.2359 -1.0797 0.2183 -1.1569 0.2008 -1.2342 0.1838 -1.3115 0.1672 -1.3888 0.1513 -1.4660 0.1362 -1.5433 0.1219 -1.6206 0.1085 -1.6978 0.0960 -1.7751 0.0845 -1.8524 0.0740 -1.9296 0.0644 -2.0069 0.0558 -2.0842 0.0480 -2.1614 0.0411 -2.2387 0.0350 -2.3160 0.0296 -2.3932 0.0250 -2.4705 0.0209 -2.5478 0.0174 -2.6250 0.0144 -2.7023 0.0119 -2.7796 0.0097 -2.8568 0.0079 -2.9341 0.0064 -3.0114 0.0052 -3.0886 0.0041 -3.1659 0.0033 -3.2432 0.0026 -3.3204 0.0021 -3.3977 0.0016 -3.4750 0.0013 -3.5523 0.0010 -3.6295 0.0008 -3.7068 0.0006 -3.7841 0.0004 -3.8613 0.0003 -3.9386 0.0003 -TraitC_T3 1 -250 150 -2 8 9 -0 --4.7490 0.0000 --4.6626 0.0000 --4.5763 0.0000 --4.4899 0.0000 --4.4036 0.0000 --4.3172 0.0001 --4.2309 0.0001 --4.1445 0.0001 --4.0582 0.0002 --3.9718 0.0002 --3.8855 0.0003 --3.7991 0.0005 --3.7127 0.0006 --3.6264 0.0008 --3.5400 0.0011 --3.4537 0.0015 --3.3673 0.0019 --3.2810 0.0025 --3.1946 0.0033 --3.1083 0.0042 --3.0219 0.0054 --2.9356 0.0069 --2.8492 0.0087 --2.7629 0.0109 --2.6765 0.0135 --2.5901 0.0167 --2.5038 0.0205 --2.4174 0.0250 --2.3311 0.0303 --2.2447 0.0364 --2.1584 0.0435 --2.0720 0.0516 --1.9857 0.0608 --1.8993 0.0711 --1.8130 0.0826 --1.7266 0.0953 --1.6403 0.1091 --1.5539 0.1242 --1.4675 0.1403 --1.3812 0.1575 --1.2948 0.1755 --1.2085 0.1943 --1.1221 0.2136 --1.0358 0.2331 --0.9494 0.2527 --0.8631 0.2721 --0.7767 0.2910 --0.6904 0.3090 --0.6040 0.3259 --0.5177 0.3413 --0.4313 0.3550 --0.3449 0.3667 --0.2586 0.3762 --0.1722 0.3833 --0.0859 0.3878 -0.0005 0.3897 -0.0868 0.3889 -0.1732 0.3854 -0.2595 0.3793 -0.3459 0.3708 -0.4322 0.3599 -0.5186 0.3470 -0.6049 0.3322 -0.6913 0.3159 -0.7777 0.2983 -0.8640 0.2797 -0.9504 0.2605 -1.0367 0.2410 -1.1231 0.2214 -1.2094 0.2019 -1.2958 0.1829 -1.3821 0.1646 -1.4685 0.1471 -1.5548 0.1305 -1.6412 0.1150 -1.7275 0.1007 -1.8139 0.0875 -1.9003 0.0755 -1.9866 0.0648 -2.0730 0.0551 -2.1593 0.0466 -2.2457 0.0391 -2.3320 0.0326 -2.4184 0.0270 -2.5047 0.0222 -2.5911 0.0182 -2.6774 0.0147 -2.7638 0.0119 -2.8501 0.0095 -2.9365 0.0075 -3.0229 0.0060 -3.1092 0.0047 -3.1956 0.0036 -3.2819 0.0028 -3.3683 0.0022 -3.4546 0.0016 -3.5410 0.0012 -3.6273 0.0009 -3.7137 0.0007 -3.8000 0.0005 -3.8864 0.0004 diff --git a/sourcecodes/data/example_time_series/TEbnet_figure_new.txt b/sourcecodes/data/example_time_series/TEbnet_figure_new.txt deleted file mode 100644 index 4dd4fcc9..00000000 --- a/sourcecodes/data/example_time_series/TEbnet_figure_new.txt +++ /dev/null @@ -1,864 +0,0 @@ -8 -10 -1500 1200 -TraitC_T2 0 0 -TraitC_T1 250 0 -TraitB_T3 500 0 -TraitB_T1 750 0 -Genotype 1000 0 -TraitA_T3 275 240 -TraitA_T2 650 240 -TraitA_T1 1025 240 -TraitB_T2 500 480 -TraitC_T3 650 720 -TraitC_T2 1 -250 150 -0 -0 --4.0699 0.0001 --3.9911 0.0002 --3.9123 0.0002 --3.8335 0.0003 --3.7548 0.0004 --3.6760 0.0005 --3.5972 0.0007 --3.5185 0.0009 --3.4397 0.0012 --3.3609 0.0015 --3.2821 0.0020 --3.2034 0.0025 --3.1246 0.0032 --3.0458 0.0041 --2.9670 0.0052 --2.8883 0.0065 --2.8095 0.0081 --2.7307 0.0101 --2.6520 0.0124 --2.5732 0.0152 --2.4944 0.0185 --2.4156 0.0224 --2.3369 0.0269 --2.2581 0.0322 --2.1793 0.0382 --2.1006 0.0451 --2.0218 0.0529 --1.9430 0.0617 --1.8642 0.0716 --1.7855 0.0824 --1.7067 0.0944 --1.6279 0.1074 --1.5492 0.1215 --1.4704 0.1366 --1.3916 0.1526 --1.3128 0.1695 --1.2341 0.1871 --1.1553 0.2052 --1.0765 0.2238 --0.9978 0.2425 --0.9190 0.2612 --0.8402 0.2796 --0.7614 0.2975 --0.6827 0.3147 --0.6039 0.3308 --0.5251 0.3456 --0.4464 0.3588 --0.3676 0.3703 --0.2888 0.3799 --0.2100 0.3873 --0.1313 0.3924 --0.0525 0.3952 -0.0263 0.3956 -0.1050 0.3936 -0.1838 0.3892 -0.2626 0.3826 -0.3414 0.3737 -0.4201 0.3629 -0.4989 0.3502 -0.5777 0.3358 -0.6564 0.3202 -0.7352 0.3033 -0.8140 0.2857 -0.8928 0.2674 -0.9715 0.2487 -1.0503 0.2300 -1.1291 0.2114 -1.2078 0.1930 -1.2866 0.1753 -1.3654 0.1581 -1.4442 0.1418 -1.5229 0.1264 -1.6017 0.1120 -1.6805 0.0986 -1.7592 0.0863 -1.8380 0.0751 -1.9168 0.0649 -1.9956 0.0558 -2.0743 0.0476 -2.1531 0.0404 -2.2319 0.0341 -2.3106 0.0286 -2.3894 0.0238 -2.4682 0.0197 -2.5470 0.0163 -2.6257 0.0133 -2.7045 0.0108 -2.7833 0.0087 -2.8620 0.0070 -2.9408 0.0056 -3.0196 0.0045 -3.0984 0.0035 -3.1771 0.0028 -3.2559 0.0021 -3.3347 0.0017 -3.4134 0.0013 -3.4922 0.0010 -3.5710 0.0007 -3.6498 0.0006 -3.7285 0.0004 -3.8073 0.0003 -TraitC_T1 1 -250 150 -0 -0 --3.8413 0.0003 --3.7581 0.0004 --3.6749 0.0005 --3.5917 0.0007 --3.5086 0.0009 --3.4254 0.0012 --3.3422 0.0016 --3.2591 0.0021 --3.1759 0.0028 --3.0927 0.0036 --3.0095 0.0046 --2.9264 0.0059 --2.8432 0.0074 --2.7600 0.0093 --2.6768 0.0116 --2.5937 0.0144 --2.5105 0.0178 --2.4273 0.0218 --2.3441 0.0265 --2.2610 0.0320 --2.1778 0.0384 --2.0946 0.0457 --2.0114 0.0540 --1.9283 0.0635 --1.8451 0.0741 --1.7619 0.0859 --1.6787 0.0989 --1.5956 0.1131 --1.5124 0.1284 --1.4292 0.1448 --1.3460 0.1623 --1.2629 0.1806 --1.1797 0.1995 --1.0965 0.2190 --1.0133 0.2388 --0.9302 0.2585 --0.8470 0.2781 --0.7638 0.2970 --0.6806 0.3151 --0.5975 0.3320 --0.5143 0.3475 --0.4311 0.3612 --0.3479 0.3729 --0.2648 0.3824 --0.1816 0.3894 --0.0984 0.3939 --0.0152 0.3957 -0.0679 0.3949 -0.1511 0.3914 -0.2343 0.3852 -0.3174 0.3766 -0.4006 0.3657 -0.4838 0.3527 -0.5670 0.3379 -0.6501 0.3215 -0.7333 0.3038 -0.8165 0.2851 -0.8997 0.2657 -0.9828 0.2460 -1.0660 0.2262 -1.1492 0.2066 -1.2324 0.1874 -1.3155 0.1689 -1.3987 0.1511 -1.4819 0.1343 -1.5651 0.1186 -1.6482 0.1040 -1.7314 0.0905 -1.8146 0.0783 -1.8978 0.0673 -1.9809 0.0574 -2.0641 0.0486 -2.1473 0.0409 -2.2305 0.0342 -2.3136 0.0284 -2.3968 0.0234 -2.4800 0.0192 -2.5632 0.0156 -2.6463 0.0126 -2.7295 0.0101 -2.8127 0.0081 -2.8959 0.0064 -2.9790 0.0050 -3.0622 0.0039 -3.1454 0.0030 -3.2286 0.0023 -3.3117 0.0018 -3.3949 0.0014 -3.4781 0.0010 -3.5613 0.0008 -3.6444 0.0006 -3.7276 0.0004 -3.8108 0.0003 -3.8940 0.0002 -3.9771 0.0002 -4.0603 0.0001 -4.1435 0.0001 -4.2266 0.0001 -4.3098 0.0000 -4.3930 0.0000 -4.4762 0.0000 -TraitB_T3 1 -250 150 -0 -0 --3.8488 0.0003 --3.7734 0.0004 --3.6979 0.0005 --3.6224 0.0006 --3.5469 0.0008 --3.4714 0.0011 --3.3959 0.0014 --3.3205 0.0017 --3.2450 0.0022 --3.1695 0.0028 --3.0940 0.0036 --3.0185 0.0045 --2.9430 0.0056 --2.8676 0.0069 --2.7921 0.0085 --2.7166 0.0105 --2.6411 0.0128 --2.5656 0.0155 --2.4902 0.0187 --2.4147 0.0225 --2.3392 0.0268 --2.2637 0.0318 --2.1882 0.0375 --2.1127 0.0440 --2.0373 0.0513 --1.9618 0.0596 --1.8863 0.0687 --1.8108 0.0788 --1.7353 0.0899 --1.6598 0.1020 --1.5844 0.1151 --1.5089 0.1291 --1.4334 0.1440 --1.3579 0.1597 --1.2824 0.1762 --1.2070 0.1933 --1.1315 0.2108 --1.0560 0.2286 --0.9805 0.2466 --0.9050 0.2645 --0.8295 0.2821 --0.7541 0.2992 --0.6786 0.3155 --0.6031 0.3309 --0.5276 0.3451 --0.4521 0.3579 --0.3766 0.3691 --0.3012 0.3785 --0.2257 0.3860 --0.1502 0.3914 --0.0747 0.3947 -0.0008 0.3958 -0.0762 0.3946 -0.1517 0.3913 -0.2272 0.3858 -0.3027 0.3783 -0.3782 0.3689 -0.4537 0.3577 -0.5291 0.3448 -0.6046 0.3306 -0.6801 0.3152 -0.7556 0.2988 -0.8311 0.2817 -0.9066 0.2641 -0.9820 0.2462 -1.0575 0.2283 -1.1330 0.2104 -1.2085 0.1929 -1.2840 0.1758 -1.3595 0.1594 -1.4349 0.1437 -1.5104 0.1288 -1.5859 0.1148 -1.6614 0.1018 -1.7369 0.0897 -1.8123 0.0786 -1.8878 0.0685 -1.9633 0.0594 -2.0388 0.0512 -2.1143 0.0439 -2.1898 0.0374 -2.2652 0.0317 -2.3407 0.0267 -2.4162 0.0224 -2.4917 0.0186 -2.5672 0.0155 -2.6427 0.0127 -2.7181 0.0104 -2.7936 0.0085 -2.8691 0.0069 -2.9446 0.0056 -3.0201 0.0044 -3.0955 0.0035 -3.1710 0.0028 -3.2465 0.0022 -3.3220 0.0017 -3.3975 0.0014 -3.4730 0.0010 -3.5484 0.0008 -3.6239 0.0006 -3.6994 0.0005 -TraitB_T1 1 -250 150 -0 -0 --3.7153 0.0004 --3.6359 0.0006 --3.5565 0.0008 --3.4772 0.0010 --3.3978 0.0013 --3.3184 0.0018 --3.2390 0.0023 --3.1596 0.0029 --3.0802 0.0037 --3.0009 0.0047 --2.9215 0.0059 --2.8421 0.0074 --2.7627 0.0093 --2.6833 0.0114 --2.6039 0.0141 --2.5246 0.0172 --2.4452 0.0209 --2.3658 0.0252 --2.2864 0.0302 --2.2070 0.0360 --2.1277 0.0427 --2.0483 0.0502 --1.9689 0.0587 --1.8895 0.0683 --1.8101 0.0789 --1.7307 0.0906 --1.6514 0.1034 --1.5720 0.1173 --1.4926 0.1322 --1.4132 0.1481 --1.3338 0.1649 --1.2544 0.1824 --1.1751 0.2006 --1.0957 0.2192 --1.0163 0.2381 --0.9369 0.2570 --0.8575 0.2756 --0.7781 0.2938 --0.6988 0.3112 --0.6194 0.3277 --0.5400 0.3429 --0.4606 0.3565 --0.3812 0.3685 --0.3019 0.3784 --0.2225 0.3863 --0.1431 0.3918 --0.0637 0.3950 -0.0157 0.3957 -0.0951 0.3940 -0.1744 0.3899 -0.2538 0.3834 -0.3332 0.3747 -0.4126 0.3640 -0.4920 0.3513 -0.5714 0.3370 -0.6507 0.3213 -0.7301 0.3045 -0.8095 0.2867 -0.8889 0.2683 -0.9683 0.2495 -1.0477 0.2306 -1.1270 0.2118 -1.2064 0.1934 -1.2858 0.1754 -1.3652 0.1582 -1.4446 0.1417 -1.5239 0.1262 -1.6033 0.1117 -1.6827 0.0982 -1.7621 0.0859 -1.8415 0.0746 -1.9209 0.0644 -2.0002 0.0553 -2.0796 0.0471 -2.1590 0.0399 -2.2384 0.0336 -2.3178 0.0281 -2.3972 0.0234 -2.4765 0.0194 -2.5559 0.0159 -2.6353 0.0130 -2.7147 0.0105 -2.7941 0.0085 -2.8735 0.0068 -2.9528 0.0054 -3.0322 0.0043 -3.1116 0.0034 -3.1910 0.0026 -3.2704 0.0020 -3.3497 0.0016 -3.4291 0.0012 -3.5085 0.0009 -3.5879 0.0007 -3.6673 0.0005 -3.7467 0.0004 -3.8260 0.0003 -3.9054 0.0002 -3.9848 0.0002 -4.0642 0.0001 -4.1436 0.0001 -4.2230 0.0001 -Genotype 2 -250 150 -0 -4 6 7 8 9 -1 0.9800 -2 0.0200 -TraitA_T3 1 -250 150 -1 5 -0 --3.6094 0.0000 --3.5392 0.0000 --3.4689 0.0000 --3.3987 0.0000 --3.3285 0.0000 --3.2582 0.0000 --3.1880 0.0000 --3.1177 0.0000 --3.0475 0.0001 --2.9773 0.0001 --2.9070 0.0002 --2.8368 0.0003 --2.7665 0.0004 --2.6963 0.0007 --2.6261 0.0012 --2.5558 0.0019 --2.4856 0.0029 --2.4154 0.0044 --2.3451 0.0067 --2.2749 0.0100 --2.2046 0.0145 --2.1344 0.0208 --2.0642 0.0293 --1.9939 0.0405 --1.9237 0.0552 --1.8534 0.0738 --1.7832 0.0970 --1.7130 0.1254 --1.6427 0.1592 --1.5725 0.1988 --1.5022 0.2440 --1.4320 0.2943 --1.3618 0.3489 --1.2915 0.4067 --1.2213 0.4658 --1.1510 0.5245 --1.0808 0.5805 --1.0106 0.6315 --0.9403 0.6752 --0.8701 0.7097 --0.7999 0.7331 --0.7296 0.7444 --0.6594 0.7430 --0.5891 0.7289 --0.5189 0.7029 --0.4487 0.6662 --0.3784 0.6206 --0.3082 0.5683 --0.2379 0.5116 --0.1677 0.4526 --0.0975 0.3936 --0.0272 0.3364 -0.0430 0.2827 -0.1133 0.2334 -0.1835 0.1895 -0.2537 0.1512 -0.3240 0.1186 -0.3942 0.0914 -0.4645 0.0692 -0.5347 0.0516 -0.6049 0.0378 -0.6752 0.0272 -0.7454 0.0192 -0.8156 0.0134 -0.8859 0.0091 -0.9561 0.0061 -1.0264 0.0040 -1.0966 0.0026 -1.1668 0.0017 -1.2371 0.0010 -1.3073 0.0006 -1.3776 0.0004 -1.4478 0.0002 -1.5180 0.0001 -1.5883 0.0001 -1.6585 0.0000 -1.7288 0.0000 -1.7990 0.0000 -1.8692 0.0000 -1.9395 0.0000 -2.0097 0.0000 -2.0799 0.0000 -2.1502 0.0000 -2.2204 0.0000 -2.2907 0.0000 -2.3609 0.0000 -2.4311 0.0000 -2.5014 0.0000 -2.5716 0.0000 -2.6419 0.0000 -2.7121 0.0000 -2.7823 0.0000 -2.8526 0.0000 -2.9228 0.0000 -2.9931 0.0000 -3.0633 0.0000 -3.1335 0.0000 -3.2038 0.0000 -3.2740 0.0000 -3.3443 0.0000 -3.4145 0.0000 -TraitA_T2 1 -250 150 -1 5 -0 --3.5730 0.0000 --3.5043 0.0000 --3.4357 0.0000 --3.3670 0.0000 --3.2984 0.0000 --3.2298 0.0000 --3.1611 0.0000 --3.0925 0.0000 --3.0239 0.0000 --2.9552 0.0000 --2.8866 0.0001 --2.8180 0.0001 --2.7493 0.0002 --2.6807 0.0003 --2.6121 0.0005 --2.5434 0.0009 --2.4748 0.0015 --2.4062 0.0024 --2.3375 0.0037 --2.2689 0.0058 --2.2003 0.0087 --2.1316 0.0130 --2.0630 0.0190 --1.9943 0.0273 --1.9257 0.0384 --1.8571 0.0532 --1.7884 0.0722 --1.7198 0.0963 --1.6512 0.1260 --1.5825 0.1620 --1.5139 0.2043 --1.4453 0.2531 --1.3766 0.3078 --1.3080 0.3674 --1.2394 0.4305 --1.1707 0.4954 --1.1021 0.5595 --1.0335 0.6205 --0.9648 0.6755 --0.8962 0.7219 --0.8276 0.7575 --0.7589 0.7803 --0.6903 0.7891 --0.6216 0.7834 --0.5530 0.7635 --0.4844 0.7306 --0.4157 0.6863 --0.3471 0.6330 --0.2785 0.5731 --0.2098 0.5094 --0.1412 0.4445 --0.0726 0.3808 --0.0039 0.3203 -0.0647 0.2644 -0.1333 0.2144 -0.2020 0.1706 -0.2706 0.1333 -0.3392 0.1022 -0.4079 0.0770 -0.4765 0.0569 -0.5451 0.0413 -0.6138 0.0294 -0.6824 0.0206 -0.7511 0.0141 -0.8197 0.0095 -0.8883 0.0063 -0.9570 0.0041 -1.0256 0.0026 -1.0942 0.0016 -1.1629 0.0010 -1.2315 0.0006 -1.3001 0.0004 -1.3688 0.0002 -1.4374 0.0001 -1.5060 0.0001 -1.5747 0.0000 -1.6433 0.0000 -1.7119 0.0000 -1.7806 0.0000 -1.8492 0.0000 -1.9178 0.0000 -1.9865 0.0000 -2.0551 0.0000 -2.1238 0.0000 -2.1924 0.0000 -2.2610 0.0000 -2.3297 0.0000 -2.3983 0.0000 -2.4669 0.0000 -2.5356 0.0000 -2.6042 0.0000 -2.6728 0.0000 -2.7415 0.0000 -2.8101 0.0000 -2.8787 0.0000 -2.9474 0.0000 -3.0160 0.0000 -3.0846 0.0000 -3.1533 0.0000 -3.2219 0.0000 -3.2905 0.0000 -TraitA_T1 1 -250 150 -1 5 -2 9 10 -1.5029 1.0000 -TraitB_T2 1 -250 150 -2 5 8 -1 10 --3.6634 0.0000 --3.5878 0.0000 --3.5122 0.0000 --3.4365 0.0000 --3.3609 0.0000 --3.2853 0.0000 --3.2097 0.0000 --3.1340 0.0000 --3.0584 0.0000 --2.9828 0.0000 --2.9072 0.0000 --2.8315 0.0000 --2.7559 0.0000 --2.6803 0.0000 --2.6046 0.0000 --2.5290 0.0000 --2.4534 0.0000 --2.3778 0.0000 --2.3021 0.0001 --2.2265 0.0001 --2.1509 0.0002 --2.0753 0.0003 --1.9996 0.0005 --1.9240 0.0007 --1.8484 0.0011 --1.7727 0.0016 --1.6971 0.0024 --1.6215 0.0035 --1.5459 0.0050 --1.4702 0.0071 --1.3946 0.0099 --1.3190 0.0136 --1.2434 0.0185 --1.1677 0.0249 --1.0921 0.0330 --1.0165 0.0432 --0.9408 0.0558 --0.8652 0.0712 --0.7896 0.0896 --0.7140 0.1112 --0.6383 0.1364 --0.5627 0.1650 --0.4871 0.1971 --0.4115 0.2323 --0.3358 0.2702 --0.2602 0.3103 --0.1846 0.3517 --0.1089 0.3935 --0.0333 0.4345 -0.0423 0.4735 -0.1179 0.5094 -0.1936 0.5408 -0.2692 0.5667 -0.3448 0.5862 -0.4205 0.5985 -0.4961 0.6030 -0.5717 0.5998 -0.6473 0.5888 -0.7230 0.5704 -0.7986 0.5455 -0.8742 0.5149 -0.9498 0.4797 -1.0255 0.4411 -1.1011 0.4004 -1.1767 0.3587 -1.2524 0.3171 -1.3280 0.2768 -1.4036 0.2384 -1.4792 0.2027 -1.5549 0.1701 -1.6305 0.1409 -1.7061 0.1152 -1.7817 0.0929 -1.8574 0.0740 -1.9330 0.0582 -2.0086 0.0451 -2.0843 0.0346 -2.1599 0.0261 -2.2355 0.0195 -2.3111 0.0144 -2.3868 0.0104 -2.4624 0.0075 -2.5380 0.0053 -2.6136 0.0037 -2.6893 0.0026 -2.7649 0.0017 -2.8405 0.0012 -2.9162 0.0008 -2.9918 0.0005 -3.0674 0.0003 -3.1430 0.0002 -3.2187 0.0001 -3.2943 0.0001 -3.3699 0.0001 -3.4455 0.0000 -3.5212 0.0000 -3.5968 0.0000 -3.6724 0.0000 -3.7481 0.0000 -3.8237 0.0000 -3.8993 0.0000 -TraitC_T3 1 -250 150 -2 8 9 -0 --4.6954 0.0000 --4.6103 0.0000 --4.5253 0.0000 --4.4402 0.0000 --4.3551 0.0000 --4.2701 0.0000 --4.1850 0.0000 --4.1000 0.0000 --4.0149 0.0000 --3.9298 0.0000 --3.8448 0.0000 --3.7597 0.0000 --3.6746 0.0000 --3.5896 0.0000 --3.5045 0.0000 --3.4195 0.0000 --3.3344 0.0000 --3.2493 0.0000 --3.1643 0.0000 --3.0792 0.0000 --2.9942 0.0000 --2.9091 0.0000 --2.8240 0.0000 --2.7390 0.0000 --2.6539 0.0000 --2.5688 0.0000 --2.4838 0.0000 --2.3987 0.0000 --2.3137 0.0000 --2.2286 0.0000 --2.1435 0.0000 --2.0585 0.0000 --1.9734 0.0000 --1.8884 0.0000 --1.8033 0.0000 --1.7182 0.0000 --1.6332 0.0000 --1.5481 0.0000 --1.4630 0.0000 --1.3780 0.0000 --1.2929 0.0000 --1.2079 0.0000 --1.1228 0.0000 --1.0377 0.0000 --0.9527 0.0000 --0.8676 0.0000 --0.7825 0.0001 --0.6975 0.0001 --0.6124 0.0003 --0.5274 0.0006 --0.4423 0.0013 --0.3572 0.0026 --0.2722 0.0049 --0.1871 0.0090 --0.1021 0.0158 --0.0170 0.0268 -0.0681 0.0438 -0.1531 0.0690 -0.2382 0.1047 -0.3233 0.1533 -0.4083 0.2161 -0.4934 0.2937 -0.5784 0.3846 -0.6635 0.4853 -0.7486 0.5902 -0.8336 0.6917 -0.9187 0.7812 -1.0038 0.8502 -1.0888 0.8917 -1.1739 0.9013 -1.2589 0.8779 -1.3440 0.8241 -1.4291 0.7455 -1.5141 0.6498 -1.5992 0.5459 -1.6842 0.4419 -1.7693 0.3448 -1.8544 0.2592 -1.9394 0.1878 -2.0245 0.1311 -2.1096 0.0882 -2.1946 0.0572 -2.2797 0.0358 -2.3647 0.0215 -2.4498 0.0125 -2.5349 0.0070 -2.6199 0.0038 -2.7050 0.0020 -2.7900 0.0010 -2.8751 0.0005 -2.9602 0.0002 -3.0452 0.0001 -3.1303 0.0000 -3.2154 0.0000 -3.3004 0.0000 -3.3855 0.0000 -3.4705 0.0000 -3.5556 0.0000 -3.6407 0.0000 -3.7257 0.0000 -3.8108 0.0000 diff --git a/sourcecodes/data/example_time_series/TEbnlevels.txt b/sourcecodes/data/example_time_series/TEbnlevels.txt deleted file mode 100644 index 714e56bd..00000000 --- a/sourcecodes/data/example_time_series/TEbnlevels.txt +++ /dev/null @@ -1,2 +0,0 @@ -Genotype 1 2 - diff --git a/sourcecodes/data/example_time_series/TEbnnode.txt b/sourcecodes/data/example_time_series/TEbnnode.txt deleted file mode 100644 index f599e28b..00000000 --- a/sourcecodes/data/example_time_series/TEbnnode.txt +++ /dev/null @@ -1 +0,0 @@ -10 diff --git a/sourcecodes/data/example_time_series/TEbnrows.txt b/sourcecodes/data/example_time_series/TEbnrows.txt deleted file mode 100644 index c15fb720..00000000 --- a/sourcecodes/data/example_time_series/TEbnrows.txt +++ /dev/null @@ -1 +0,0 @@ -501 diff --git a/sourcecodes/data/example_time_series/TEbparameters.txt b/sourcecodes/data/example_time_series/TEbparameters.txt deleted file mode 100644 index 14ddb1ac..00000000 --- a/sourcecodes/data/example_time_series/TEbparameters.txt +++ /dev/null @@ -1,41 +0,0 @@ -Genotype -Discrete node with 2 states -1 0.5380 -2 0.4620 - -TraitA_T1 -Continuous node -0.0372 1.3165 - -TraitA_T2 -Continuous node --0.0611 1.3146 - -TraitA_T3 -Continuous node --0.0834 1.1837 - -TraitB_T1 -Continuous node --0.0563 0.9366 - -TraitB_T2 -Continuous node --0.0453 1.0389 - -TraitB_T3 -Continuous node -0.0122 0.9485 - -TraitC_T1 -Continuous node --0.0016 0.9150 - -TraitC_T2 -Continuous node -0.0917 0.9311 - -TraitC_T3 -Continuous node -0.0177 1.0392 - diff --git a/sourcecodes/data/example_time_series/TEbparent.txt b/sourcecodes/data/example_time_series/TEbparent.txt deleted file mode 100644 index b8626c4c..00000000 --- a/sourcecodes/data/example_time_series/TEbparent.txt +++ /dev/null @@ -1 +0,0 @@ -4 diff --git a/sourcecodes/data/example_time_series/TEbstructure_old.txt b/sourcecodes/data/example_time_series/TEbstructure_old.txt deleted file mode 100644 index 2d164e66..00000000 --- a/sourcecodes/data/example_time_series/TEbstructure_old.txt +++ /dev/null @@ -1,6 +0,0 @@ -Genotype 0.5380 0.4620 -TraitA_T1 0.0000 0.0000 0.0000 0.0001 0.0001 0.0001 0.0002 0.0002 0.0003 0.0004 0.0005 0.0007 0.0009 0.0011 0.0015 0.0019 0.0024 0.0030 0.0039 0.0048 0.0060 0.0075 0.0093 0.0114 0.0139 0.0168 0.0203 0.0243 0.0290 0.0344 0.0406 0.0475 0.0554 0.0642 0.0740 0.0848 0.0965 0.1093 0.1231 0.1378 0.1534 0.1698 0.1869 0.2044 0.2224 0.2406 0.2587 0.2767 0.2941 0.3109 0.3268 0.3415 0.3548 0.3666 0.3765 0.3845 0.3905 0.3942 0.3957 0.3950 0.3920 0.3868 0.3794 0.3701 0.3590 0.3461 0.3319 0.3164 0.2999 0.2826 0.2648 0.2467 0.2285 0.2105 0.1927 0.1755 0.1588 0.1430 0.1280 0.1139 0.1007 0.0886 0.0775 0.0674 0.0583 0.0501 0.0428 0.0364 0.0307 0.0258 0.0216 0.0179 0.0148 0.0122 0.0099 0.0081 0.0065 0.0052 0.0042 0.0033 0.0026 -TraitA_T2 0.0007 0.0009 0.0012 0.0015 0.0019 0.0023 0.0029 0.0036 0.0044 0.0054 0.0066 0.0079 0.0096 0.0115 0.0138 0.0164 0.0194 0.0229 0.0269 0.0314 0.0365 0.0423 0.0487 0.0559 0.0638 0.0725 0.0820 0.0923 0.1035 0.1154 0.1281 0.1416 0.1558 0.1705 0.1859 0.2016 0.2177 0.2340 0.2503 0.2666 0.2825 0.2981 0.3131 0.3272 0.3405 0.3526 0.3635 0.3730 0.3810 0.3873 0.3919 0.3948 0.3958 0.3950 0.3923 0.3879 0.3818 0.3740 0.3647 0.3539 0.3419 0.3288 0.3147 0.2998 0.2844 0.2684 0.2522 0.2359 0.2196 0.2034 0.1876 0.1723 0.1574 0.1432 0.1296 0.1168 0.1048 0.0936 0.0832 0.0736 0.0648 0.0568 0.0495 0.0430 0.0372 0.0320 0.0274 0.0233 0.0198 0.0167 0.0141 0.0118 0.0098 0.0081 0.0067 0.0055 0.0045 0.0037 0.0030 0.0024 0.0019 -TraitA_T3 0.0007 0.0008 0.0011 0.0013 0.0017 0.0021 0.0027 0.0033 0.0041 0.0050 0.0062 0.0075 0.0092 0.0111 0.0133 0.0159 0.0189 0.0224 0.0264 0.0310 0.0362 0.0421 0.0486 0.0559 0.0641 0.0730 0.0828 0.0934 0.1049 0.1172 0.1304 0.1443 0.1589 0.1742 0.1900 0.2062 0.2227 0.2394 0.2561 0.2727 0.2889 0.3046 0.3195 0.3336 0.3467 0.3585 0.3688 0.3777 0.3849 0.3903 0.3939 0.3956 0.3954 0.3933 0.3893 0.3834 0.3759 0.3666 0.3559 0.3438 0.3306 0.3162 0.3011 0.2853 0.2690 0.2524 0.2357 0.2190 0.2025 0.1864 0.1707 0.1556 0.1411 0.1273 0.1144 0.1022 0.0909 0.0805 0.0709 0.0622 0.0542 0.0471 0.0407 0.0350 0.0299 0.0255 0.0216 0.0182 0.0153 0.0128 0.0106 0.0088 0.0072 0.0059 0.0048 0.0039 0.0032 0.0025 0.0020 0.0016 0.0013 -TraitB_T2 0.0006 0.0008 0.0010 0.0013 0.0017 0.0021 0.0027 0.0034 0.0043 0.0053 0.0066 0.0081 0.0100 0.0122 0.0148 0.0178 0.0214 0.0255 0.0302 0.0357 0.0419 0.0489 0.0568 0.0655 0.0752 0.0858 0.0975 0.1100 0.1235 0.1379 0.1532 0.1692 0.1858 0.2029 0.2204 0.2381 0.2557 0.2732 0.2902 0.3066 0.3222 0.3366 0.3498 0.3615 0.3715 0.3797 0.3859 0.3901 0.3921 0.3920 0.3897 0.3853 0.3788 0.3704 0.3602 0.3483 0.3350 0.3204 0.3047 0.2882 0.2711 0.2536 0.2359 0.2183 0.2008 0.1838 0.1672 0.1513 0.1362 0.1219 0.1085 0.0960 0.0845 0.0740 0.0644 0.0558 0.0480 0.0411 0.0350 0.0296 0.0250 0.0209 0.0174 0.0144 0.0119 0.0097 0.0079 0.0064 0.0052 0.0041 0.0033 0.0026 0.0021 0.0016 0.0013 0.0010 0.0008 0.0006 0.0004 0.0003 0.0003 -TraitC_T3 0.0000 0.0000 0.0000 0.0000 0.0000 0.0001 0.0001 0.0001 0.0002 0.0002 0.0003 0.0005 0.0006 0.0008 0.0011 0.0015 0.0019 0.0025 0.0033 0.0042 0.0054 0.0069 0.0087 0.0109 0.0135 0.0167 0.0205 0.0250 0.0303 0.0364 0.0435 0.0516 0.0608 0.0711 0.0826 0.0953 0.1091 0.1242 0.1403 0.1575 0.1755 0.1943 0.2136 0.2331 0.2527 0.2721 0.2910 0.3090 0.3259 0.3413 0.3550 0.3667 0.3762 0.3833 0.3878 0.3897 0.3889 0.3854 0.3793 0.3708 0.3599 0.3470 0.3322 0.3159 0.2983 0.2797 0.2605 0.2410 0.2214 0.2019 0.1829 0.1646 0.1471 0.1305 0.1150 0.1007 0.0875 0.0755 0.0648 0.0551 0.0466 0.0391 0.0326 0.0270 0.0222 0.0182 0.0147 0.0119 0.0095 0.0075 0.0060 0.0047 0.0036 0.0028 0.0022 0.0016 0.0012 0.0009 0.0007 0.0005 0.0004 diff --git a/sourcecodes/data/example_time_series/TEbthr.txt b/sourcecodes/data/example_time_series/TEbthr.txt deleted file mode 100644 index 2eb3c4fe..00000000 --- a/sourcecodes/data/example_time_series/TEbthr.txt +++ /dev/null @@ -1 +0,0 @@ -0.5 diff --git a/sourcecodes/data/example_time_series/TEbtier.txt b/sourcecodes/data/example_time_series/TEbtier.txt deleted file mode 100644 index 29aafcbe..00000000 --- a/sourcecodes/data/example_time_series/TEbtier.txt +++ /dev/null @@ -1 +0,0 @@ -4,Tier1,1,Genotype,Tier2,3,TraitA_T1,TraitB_T1,TraitC_T1,Tier3,3,TraitA_T2,TraitB_T2,TraitC_T2,Tier4,3,TraitA_T3,TraitB_T3,TraitC_T3, \ No newline at end of file diff --git a/sourcecodes/data/example_time_series/TEbtype.txt b/sourcecodes/data/example_time_series/TEbtype.txt deleted file mode 100644 index e4d7d174..00000000 --- a/sourcecodes/data/example_time_series/TEbtype.txt +++ /dev/null @@ -1,2 +0,0 @@ -Genotype TraitA_T1 TraitA_T2 TraitA_T3 TraitB_T1 TraitB_T2 TraitB_T3 TraitC_T1 TraitC_T2 TraitC_T3 -2 1 1 1 1 1 1 1 1 1 diff --git a/sourcecodes/data/example_time_series/TEbvar.txt b/sourcecodes/data/example_time_series/TEbvar.txt deleted file mode 100644 index 301160a9..00000000 --- a/sourcecodes/data/example_time_series/TEbvar.txt +++ /dev/null @@ -1 +0,0 @@ -8 \ No newline at end of file diff --git a/sourcecodes/data/example_time_series/TEbvardata.txt b/sourcecodes/data/example_time_series/TEbvardata.txt deleted file mode 100644 index f36841a7..00000000 --- a/sourcecodes/data/example_time_series/TEbvardata.txt +++ /dev/null @@ -1 +0,0 @@ -1.5028501775188 \ No newline at end of file diff --git a/sourcecodes/data/example_time_series/TEbvarname.txt b/sourcecodes/data/example_time_series/TEbvarname.txt deleted file mode 100644 index aa23daa0..00000000 --- a/sourcecodes/data/example_time_series/TEbvarname.txt +++ /dev/null @@ -1 +0,0 @@ -TraitA_T1 \ No newline at end of file diff --git a/sourcecodes/data/example_time_series/TEbwhite.txt b/sourcecodes/data/example_time_series/TEbwhite.txt deleted file mode 100644 index 83e81b8b..00000000 --- a/sourcecodes/data/example_time_series/TEbwhite.txt +++ /dev/null @@ -1 +0,0 @@ -From To diff --git a/sourcecodes/data/example_time_series/old/TEbrun_evidencemodified.sh b/sourcecodes/data/example_time_series/old/TEbrun_evidencemodified.sh deleted file mode 100644 index ff2eafcd..00000000 --- a/sourcecodes/data/example_time_series/old/TEbrun_evidencemodified.sh +++ /dev/null @@ -1,38 +0,0 @@ -#!/bin/sh -# script for execution of deployed applications -# -# Sets up the MCR environment for the current $ARCH and executes -# the specified command. -# -exe_name=$0 -exe_dir=`dirname "$0"` -echo "------------------------------------------" -if [ "x$1" = "x" ]; then - echo Usage: - echo $0 \<deployedMCRroot\> args -else - echo Setting up environment variables - MCRROOT="$1" - echo --- - LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; - MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; - XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; - export LD_LIBRARY_PATH; - export XAPPLRESDIR; - echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; - shift 1 - args= - while [ $# -gt 0 ]; do - token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank - args="${args} ${token}" - shift - done - "${exe_dir}"/evidencemodified TEb -fi -exit diff --git a/sourcecodes/data/example_time_series/old/TEbrun_initialstructure.sh b/sourcecodes/data/example_time_series/old/TEbrun_initialstructure.sh deleted file mode 100644 index 3417deda..00000000 --- a/sourcecodes/data/example_time_series/old/TEbrun_initialstructure.sh +++ /dev/null @@ -1,38 +0,0 @@ -#!/bin/sh -# script for execution of deployed applications -# -# Sets up the MCR environment for the current $ARCH and executes -# the specified command. -# -exe_name=$0 -exe_dir=`dirname "$0"` -echo "------------------------------------------" -if [ "x$1" = "x" ]; then - echo Usage: - echo $0 \<deployedMCRroot\> args -else - echo Setting up environment variables - MCRROOT="$1" - echo --- - LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; - MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; - XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; - export LD_LIBRARY_PATH; - export XAPPLRESDIR; - echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; - shift 1 - args= - while [ $# -gt 0 ]; do - token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank - args="${args} ${token}" - shift - done - "${exe_dir}"/initialstructure TEb -fi -exit |
