BNW using Octave instead of Matlab.

This version of BNW should perform the same as the original version. The only difference is that it uses Octave instead of Matlab when running BayesNet Toolbox during parameter learning.

I am calling this BNW_1.02. It can be accessed at:
compbio.uthsc.edu/BNW_1.02

1 files changed, 70 insertions, 0 deletions

diff --git a/sourcecodes/bnt-master/KPMtools/asdemo.m b/sourcecodes/bnt-master/KPMtools/asdemo.m
new file mode 100644
index 00000000..6de98ad9
--- /dev/null
+++ b/sourcecodes/bnt-master/KPMtools/asdemo.m
@@ -0,0 +1,70 @@
+% ASORT
+% a pedestrian NUMERICAL SORTER of ALPHANUMERIC data
+
+% - create some data
+		d = {
+%		strings with one valid alphanumeric number
+%		sorted numerically
+			'-inf'
+			'x-3.2e4y'
+			'f-1.4'
+			'-.1'
+			'+ .1d-2'
+			'.1'
+			'f.1'
+			'f -+1.4'
+			'f.2'
+			'f.3'
+			'f.10'
+			'f.11'
+			'+inf'
+			' -nan'
+			'+ nan'
+			'nan'
+%		strings with many numbers or invalid/ambiguous numbers
+%		sorted in ascii dictionary order
+			' nan nan'
+			'+ .1e-.2'
+			'-1 2'
+			'Z12e12ez'
+			'inf -inf'
+			's.3TT.4'
+			'z12e12ez'
+%		strings without numbers
+%		sorted in ascii dictionary order
+			' . .. '
+			'.'
+			'...'
+			'.b a.'
+			'a string'
+			'a. .b'
+		};
+%   ... and scramble it...
+		rand('seed',10);
+		d=d(randperm(numel(d)));
+
+% - run ASORT with
+%   verbose output:		<-v>
+%   keep additional results:	<-d>
+		o=asort(d,'-v','-d');
+% - or
+%		p=asort(char(d),'-v','-d');
+
+% - show results
+		o
+		o.anr
+
+% - run ASORT with no-space/template options
+%   NOTE the impact of -w/-t order!
+		s={'ff - 1','ff + 1','- 12'};
+%   RAW
+		o=asort(s,'-v');
+%   remove SPACEs
+		o=asort(s,'-v','-w');
+%   remove TEMPLATE(s)
+		o=asort(s,'-v','-t',{'ff','1'});
+%   remove TEMPLATE(s) than SPACEs
+		o=asort(s,'-v','-t','1','-w');
+%   remove SPACEs than TEMPLATE(s)
+		o=asort(s,'-v','-w','-t','1');
+