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| author | ziejd2 | 2017-09-28 15:04:40 -0500 |
|---|---|---|
| committer | ziejd2 | 2017-09-28 15:04:40 -0500 |
| commit | 8070dc963753142bb86c4ed698d91fd623ed28e7 (patch) | |
| tree | d0f6dd8fc46a49b819aa55c1a90faa14d8448883 /sourcecodes/bnt-master/BNT/inference/@inf_engine/Old | |
| parent | 7cc31810d53176e805532b2789955f4eedbce6bb (diff) | |
| download | BNW-8070dc963753142bb86c4ed698d91fd623ed28e7.tar.gz | |
BNW using Octave instead of Matlab.
This version of BNW should perform the same as the original version. The only difference is that it uses Octave instead of Matlab when running BayesNet Toolbox during parameter learning. I am calling this BNW_1.02. It can be accessed at: compbio.uthsc.edu/BNW_1.02
Diffstat (limited to 'sourcecodes/bnt-master/BNT/inference/@inf_engine/Old')
5 files changed, 24 insertions, 0 deletions
diff --git a/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/CVS/Entries b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/CVS/Entries new file mode 100644 index 00000000..ce1f8c1e --- /dev/null +++ b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/CVS/Entries @@ -0,0 +1,3 @@ +/marginal_family_pot.m/1.1.1.1/Wed May 29 15:59:56 2002// +/observed_nodes.m/1.1.1.1/Wed May 29 15:59:56 2002// +D diff --git a/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/CVS/Repository b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/CVS/Repository new file mode 100644 index 00000000..de36d64e --- /dev/null +++ b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/CVS/Repository @@ -0,0 +1 @@ +FullBNT/BNT/inference/@inf_engine/Old diff --git a/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/CVS/Root b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/CVS/Root new file mode 100644 index 00000000..f3bd14a6 --- /dev/null +++ b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/CVS/Root @@ -0,0 +1 @@ +:ext:nsaunier@bnt.cvs.sourceforge.net:/cvsroot/bnt diff --git a/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/marginal_family_pot.m b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/marginal_family_pot.m new file mode 100644 index 00000000..c1e63710 --- /dev/null +++ b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/marginal_family_pot.m @@ -0,0 +1,14 @@ +function pot = marginal_family_pot(engine, i) +% MARGINAL_FAMILY_POT Compute the marginal on i's family and return as a potentila (inf_engine) +% function pot = marginal_family_pot(engine,i) + +% This function is only called by solve_limid. +% It requires that engine's marginal_family function return a potential. +% This is true for jtree_inf_engine, but not for, say, jtree_ndx_inf_engine. +% All limids must be solved using potentials, +% but this is not true for bnets. + +%[m, pot] = marginal_family(engine, i); + +bnet = bnet_from_engine(engine); +[m, pot] = marginal_nodes(engine, family(bnet.dag, i)); diff --git a/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/observed_nodes.m b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/observed_nodes.m new file mode 100644 index 00000000..97fccdb3 --- /dev/null +++ b/sourcecodes/bnt-master/BNT/inference/@inf_engine/Old/observed_nodes.m @@ -0,0 +1,5 @@ +function onodes = observed_nodes(engine) +% OBSERVED_NODES Return nodes that are guaranteed to be observed, indep of evidence (generic inf_engine) +% onodes = observed_nodes(engine) + +onodes = []; |