about summary refs log tree commit diff
path: root/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node
diff options
context:
space:
mode:
authorziejd22017-09-28 15:04:40 -0500
committerziejd22017-09-28 15:04:40 -0500
commit8070dc963753142bb86c4ed698d91fd623ed28e7 (patch)
treed0f6dd8fc46a49b819aa55c1a90faa14d8448883 /sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node
parent7cc31810d53176e805532b2789955f4eedbce6bb (diff)
downloadBNW-8070dc963753142bb86c4ed698d91fd623ed28e7.tar.gz
BNW using Octave instead of Matlab.
This version of BNW should perform the same as the original version. The only difference is that it uses Octave instead of Matlab when running BayesNet Toolbox during parameter learning.

I am calling this BNW_1.02. It can be accessed at:
compbio.uthsc.edu/BNW_1.02
Diffstat (limited to 'sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node')
-rw-r--r--sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CPD_to_upot.m6
-rw-r--r--sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Entries3
-rw-r--r--sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Repository1
-rw-r--r--sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Root1
-rw-r--r--sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/tabular_chance_node.m39
5 files changed, 50 insertions, 0 deletions
diff --git a/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CPD_to_upot.m b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CPD_to_upot.m
new file mode 100644
index 00000000..3ce87d0b
--- /dev/null
+++ b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CPD_to_upot.m
@@ -0,0 +1,6 @@
+function pot = CPD_to_upot(CPD, domain)
+% CPD_TO_UPOT Convert a CPD to a utility potential
+% pot = CPD_to_upot(CPD, domain)
+
+sz = CPD.size; % mysize(CPD.CPT);
+pot = upot(domain, sz, CPD.CPT, 0*myones(sz));
diff --git a/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Entries b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Entries
new file mode 100644
index 00000000..02628802
--- /dev/null
+++ b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Entries
@@ -0,0 +1,3 @@
+/CPD_to_upot.m/1.1.1.1/Wed May 29 15:59:54 2002//
+/tabular_chance_node.m/1.1.1.1/Wed May 29 15:59:54 2002//
+D
diff --git a/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Repository b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Repository
new file mode 100644
index 00000000..3a232db2
--- /dev/null
+++ b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Repository
@@ -0,0 +1 @@
+FullBNT/BNT/CPDs/Old/@tabular_chance_node
diff --git a/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Root b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Root
new file mode 100644
index 00000000..f3bd14a6
--- /dev/null
+++ b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/CVS/Root
@@ -0,0 +1 @@
+:ext:nsaunier@bnt.cvs.sourceforge.net:/cvsroot/bnt
diff --git a/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/tabular_chance_node.m b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/tabular_chance_node.m
new file mode 100644
index 00000000..3476536c
--- /dev/null
+++ b/sourcecodes/bnt-master/BNT/CPDs/Old/@tabular_chance_node/tabular_chance_node.m
@@ -0,0 +1,39 @@
+function CPD = tabular_chance_node(sz, CPT)
+% TABULAR_CHANCE_NODE Like tabular_CPD, but simplified
+% CPD = tabular_chance_node(sz, CPT)
+%
+% sz(1:end-1) is the sizes of the parents, sz(end) is the size of this node
+% By default, CPT is a random stochastic matrix.
+
+if nargin==0
+  % This occurs if we are trying to load an object from a file.
+  CPD = init_fields;
+  CPD = class(CPD, 'tabular_chance_node');
+  return;
+elseif isa(sz, 'tabular_chance_node')
+  % This might occur if we are copying an object.
+  CPD = sz;
+  return;
+end
+CPD = init_fields;
+
+if nargin < 2,
+  CPT = mk_stochastic(myones(sz)); 
+else
+  CPT = myreshape(CPT, sz);
+end
+
+CPD.CPT = CPT;
+CPD.size = sz;
+
+CPD = class(CPD, 'tabular_chance_node');
+
+%%%%%%%%%%%
+
+function CPD = init_fields()
+% This ensures we define the fields in the same order 
+% no matter whether we load an object from a file,
+% or create it from scratch. (Matlab requires this.)
+
+CPD.CPT = [];
+CPD.size = [];