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| author | ziejd2 | 2021-10-11 16:00:02 -0500 |
|---|---|---|
| committer | ziejd2 | 2021-10-11 16:00:02 -0500 |
| commit | 566a4de3fcc9b90da036dbf385044319c11a2b6a (patch) | |
| tree | 15c23be0643f41128f11cf9bb378ed505e259a6b /README.md | |
| parent | a20784bad5cfa214ce23d16695d0064571bae9c3 (diff) | |
| parent | 73ba58868451b5fc6611e1feaa9b63f17b6cd19d (diff) | |
| download | BNW-566a4de3fcc9b90da036dbf385044319c11a2b6a.tar.gz | |
Resolved merge conflict
Diffstat (limited to 'README.md')
| -rw-r--r-- | README.md | 9 |
1 files changed, 7 insertions, 2 deletions
diff --git a/README.md b/README.md index 01f3c655..292c849a 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ This contains the code for the Bayesian Network Webserver (BNW). -The master branch will be the stable version of the code for running with GeneNetwork. The original BNW website is compbio.uthsc.edu/BNW, which currently redirects to BNW_1.3. +The master branch will be the stable version of the code for running with GeneNetwork. The BNW website is compbio.uthsc.edu/BNW; the GeneNetwork version is at: bnw.genenetwork.org. There are a couple of files in the info_files directory that provide descriptions of the BNW code and other information. @@ -15,5 +15,10 @@ There are five branches. 4) genenet6_final_1.3: This is the final version of BNW on the GENENET6 server. -5) genenet8_initial_1.3: This is the working version of BNW on GENENET8 when we transitioned to that server. +5) genenet8_initial_1.3: This is the working version of BNW on GENENET8 when we transitioned to that server. + A couple of notes about this version. + - This version writes files created by users running BNW to /var/lib/genenet/bnw. + - The structure learning package needs to be installed in /var/lib/genenet/bnw. The files in var_lib_genenet_bnw need to be copied to /var/lib/genenet/bnw and build.sh should be run there. + - There is a python environment on GENENET8 that is used by BNW. This is in bnw-env, but I am not sure how well this will transition to other servers. + |
