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| author | ziejd2 | 2021-03-02 10:43:50 -0600 |
|---|---|---|
| committer | GitHub | 2021-03-02 10:43:50 -0600 |
| commit | 4386cdf28b5413cd1c1d5491b1e29a26dda48b42 (patch) | |
| tree | 951d3c6f9344c93e4541b8e73cfc2fffdb17b112 | |
| parent | b9aab10c79e649bc4f2dcdc719e72a8d65a90234 (diff) | |
| download | BNW-4386cdf28b5413cd1c1d5491b1e29a26dda48b42.tar.gz | |
Update README.md
| -rw-r--r-- | README.md | 9 |
1 files changed, 7 insertions, 2 deletions
diff --git a/README.md b/README.md index 502fde4e..9b356019 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ This contains the code for the Bayesian Network Webserver (BNW). -The master branch will be the stable version of the code for running with GeneNetwork. The original BNW website is compbio.uthsc.edu/BNW, which currently redirects to BNW_1.3. +The master branch will be the stable version of the code for running with GeneNetwork. The BNW website is compbio.uthsc.edu/BNW, which currently redirects to BNW_1.3. There are a couple of files in the info_files directory that provide descriptions of the BNW code and other information. @@ -15,5 +15,10 @@ There are five branches. 4) genenet6_final_1.3: This is the final version of BNW on the GENENET6 server. -5) genenet8_initial_1.3: This is the working version of BNW on GENENET8 when we transitioned to that server. +5) genenet8_initial_1.3: This is the working version of BNW on GENENET8 when we transitioned to that server. + A couple of notes about this version. + - This version writes files created by user running BNW to /var/lib/genenet/bnw. + - The structure learning package needs to be installed in /var/lib/genenet/bnw. The files in var_lib_genenet_bnw need to be copied to /var/lib/genenet/bnw and build.sh should be run there. + - There is a python environment on GENENET8 that is used by BNW. This is in bnw-env, but I am not sure how well this will transition to other servers. + |