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| author | ziejd2 | 2019-01-28 16:48:05 -0600 |
|---|---|---|
| committer | GitHub | 2019-01-28 16:48:05 -0600 |
| commit | 09eb941e7eb24852e2c68c2b39e0d7a4b558f329 (patch) | |
| tree | 0390a07b6f069f1536e478f5fe8c714ea0d755a9 | |
| parent | 995f6673b5e725d6907ccd4f8e25033e8524f116 (diff) | |
| download | BNW-09eb941e7eb24852e2c68c2b39e0d7a4b558f329.tar.gz | |
Update BNW_file_overview.txt
Added additional information about using plotly
| -rw-r--r-- | BNW_file_overview.txt | 12 |
1 files changed, 9 insertions, 3 deletions
diff --git a/BNW_file_overview.txt b/BNW_file_overview.txt index 8eb60070..4e56d690 100644 --- a/BNW_file_overview.txt +++ b/BNW_file_overview.txt @@ -20,11 +20,17 @@ There are also several new run files: These have been added to the 'run_scripts' This file will provide an overview of the BNW code. -At this point, BNW requires two packages that are not currently included in the BNW directory. -These are Octave and dot/graphviz. The BNW code assumes: +At this point, BNW requires three packages that are not currently included in the BNW directory. +These are dot/graphviz; octave; and plotly. The BNW code assumes: a) dot can be executed using /usr/bin/dot b) octave can be executed using /usr/bin/octave - +c) plotly: + The version of python on the current server is too old for plotly. I installed an newer version of python in my home directory: + python2.7 is currently installed in /home/jziebart/python/Python-2.7.15/python + Then, to use plotly, I modified files.py in: + /home/jziebart/python/lib/python2.7/site-packages/plotly to use absolute paths for PLOTLY_DIR and TEST_DIR + The files that need plotly are: cv_plotly.py, kfold_plotly.py, and ts_plotly.py + BNW is currently located at /var/www/html/compbio/BNW_x.xx (The current development version is BNW_1.21). |