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authorShepherd on Tux022024-11-22 05:00:26 -0600
committerShepherd on Tux022024-11-22 05:00:26 -0600
commit0328b5a2071d991db71dba1295d213160caa7863 (patch)
treeae5c935453df352d69302b96a7cc11c2a5388fbd
parentc24d16e979c95af586328baa7a4ab131b68da60a (diff)
downloadgn-shepherd-services-0328b5a2071d991db71dba1295d213160caa7863.tar.gz
Modernize guix invocation with shell - it is broken stillHEADmaster
-rwxr-xr-xrun_singlecell.sh2
1 files changed, 1 insertions, 1 deletions
diff --git a/run_singlecell.sh b/run_singlecell.sh
index 10f9b31..5ca8f78 100755
--- a/run_singlecell.sh
+++ b/run_singlecell.sh
@@ -2,5 +2,5 @@
# /home/shepherd/guix-profiles/singlecell/bin/guix download https://bioconductor.org/packages/3.11/bioc/src/contrib/multtest_2.44.0.tar.gz
# /home/shepherd/guix-profiles/singlecell/bin/guix environment --ad-hoc singlecellrshiny -- sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ singlecellrshiny'
-/home/wrk/opt/guix-pull-5-link/bin/guix shell singlecellrshiny -- sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ singlecellrshiny'
+/home/wrk/opt/guix-pull-5-link/bin/guix shell --root=? singlecellrshiny -- sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ singlecellrshiny'