blob: acb1309d1285ee56cf1a533d9833467544508715 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
|
/*
Genome-wide Efficient Mixed Model Association (GEMMA)
Copyright (C) 2011 Xiang Zhou
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
#ifndef __GEMMA_H__
#define __GEMMA_H__
#ifdef FORCE_FLOAT
#include "param_float.h"
#else
#include "param.h"
#endif
using namespace std;
class GEMMA {
public:
//parameters
string version;
string date;
string year;
//constructor
GEMMA(void);
//functions
void PrintHeader (void);
void PrintHelp (size_t option);
void PrintLicense (void);
void Assign (int argc, char **argv, PARAM &cPar);
void BatchRun (PARAM &cPar);
void WriteLog (int argc, char **argv, PARAM &cPar);
};
#endif
|
