From b27361f30f213033ea1b5b4a30f0f9df6754d600 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Wed, 4 Aug 2021 13:41:10 +0200 Subject: Document switch -lmm 9 --- RELEASE-NOTES.md | 1 + src/gemma.cpp | 1 + 2 files changed, 2 insertions(+) diff --git a/RELEASE-NOTES.md b/RELEASE-NOTES.md index 8348a20..6e03fd9 100644 --- a/RELEASE-NOTES.md +++ b/RELEASE-NOTES.md @@ -8,6 +8,7 @@ and * Changed banner to show Copyright (C) 2012–2021, Xiang Zhou, Pjotr Prins and team * Fixed tests for new Debian stable release - mostly roundoff confusion +* Documented `-lmm 9` which adds additive effect to `-lmm 2` ## ChangeLog v0.98.4 (2021/01/29) diff --git a/src/gemma.cpp b/src/gemma.cpp index cde40b5..4d92a79 100644 --- a/src/gemma.cpp +++ b/src/gemma.cpp @@ -539,6 +539,7 @@ void GEMMA::PrintHelp(size_t option) { cout << " 3: Score test" << endl; cout << " 4: 1-3" << endl; cout << " 5: Parameter estimation in the null model only" + cout << " 9: same as option 2, but with additive effect" << endl; cout << " -lmin [num] " << " specify minimal value for lambda (default 1e-5)" << endl; -- cgit v1.2.3