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2018-08-25Added a test for LMPjotr Prins
2018-08-25eigenvalues: some error checking addedPjotr Prins
2018-07-27Add floating point hardware checking for Intel on GNU compilersPjotr Prins
When using the -check function (the default) it is enabled for Kinship computation and LM/LMM up to individual SNP computation. This means there can no longer be NaN values for matrices that are reused for every SNP, but it is possible to have NaN for individual SNPs. Fixes #161
2018-07-26Unittest: added test for forcing and catching floating point errors (this works)Pjotr Prins
2018-07-14Guix: add more build information to the final binaryPjotr Prins
2018-07-14- Guix Makefile added RPATHPjotr Prins
- Added performance metrics in ./test/performance
2018-07-14Guix: added GUIX flag to automate make settings. Added DAG of dependenciesPjotr Prins
2018-07-13GNU Guix build systemPjotr Prins
2018-06-29Fix conflictPjotr Prins
2018-06-29Merge branch 'master' of github.com:genetics-statistics/GEMMAPjotr Prins
2018-06-15explain how to deal with population stratification in the reference panelxiangzhou
2018-06-10Merge pull request #151 from Dybian/patch-1.Peter Carbonetto
Typo: sepcified -> specified.
2018-06-05Typo: sepcified -> specifiedDylan Aïssi
2018-05-02doc: data-mungingPjotr Prins
2018-03-06Added link to RCC workshop.Peter Carbonetto
2018-03-01Merge pull request #139 from DannyArends/minGW_RPeter Carbonetto
Added support to build GEMMA using the Rtool chain in Windows (x64).
2018-03-01Early morning extra fwd slash failure, fixed in this commitDannyArends
2018-03-01Trying to fix the -isystem/ failure of travisDannyArends
2018-02-28Compilation instruction for GEMMA using the R-toolchain under windowsDannyArends
2018-02-28Makefile changes, to compile under windowsDannyArends
2018-02-28MinGW mkdir function doesn't allow for S_IRWXU, paramsDannyArends
2018-02-28renamed import io.h to gemma_io.hDannyArends
2018-02-28io.h is a std lib function for MinGW64, renamed it to gemma_io.hDannyArends
2018-02-28Windows compilation paths, and restructuring the -isystemDannyArends
2018-02-28OS detection, and version script generator selection via VGENDannyArends
2018-02-28Windows script to generate src/version.hDannyArends
2018-02-22Changed handling of version number so it does not modify every compilePjotr Prins
2018-02-22mantual.tex: added info on creating unique directory for outputPjotr Prins
2018-01-27Bump preview versionPjotr Prins
2018-01-27Extra error info on strtok parsing failure - should help supportPjotr Prins
2018-01-26Always check input data for strtok - unless -no-check is usedPjotr Prins
2018-01-26Change OpenBLAS warningPjotr Prins
2017-12-27Release generic x86_64Pjotr Prins
2017-12-19Merge branch 'master' of github.com:genetics-statistics/GEMMAPjotr Prins
2017-12-19Documentation and Travis fixesPjotr Prins
2017-12-19Optimizing OpenBlasPjotr Prins
2017-12-19Use OpenBlas cblas interface by defaultPjotr Prins
2017-12-19Openblas not linkingPjotr Prins
2017-12-19MakefilePjotr Prins
2017-12-19Fix travisPjotr Prins
2017-12-19Make eigelib -legacyPjotr Prins
2017-12-18lapack is part of OpenBlasPjotr Prins
2017-12-18READMEPjotr Prins
2017-12-18Getting ready for release. Defaulting to OpenBlasPjotr Prins
2017-12-17Reverted on using eigenlib_dgemm because of hanging K compute with datasetPjotr Prins
2017-12-17BimbamKin: show error when genotypes do not matchPjotr Prins
2017-12-12Updated copyright infoPjotr Prins
2017-12-12README: License info for gzstreamPjotr Prins
2017-12-08Changed banner and behaviourPjotr Prins
2017-12-08Legacy mode does not show logl_H1 column in outputPjotr Prins
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