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Diffstat (limited to 'test/dev_tests.rb')
-rw-r--r-- | test/dev_tests.rb | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/test/dev_tests.rb b/test/dev_tests.rb new file mode 100644 index 0000000..8ce8dbc --- /dev/null +++ b/test/dev_tests.rb @@ -0,0 +1,25 @@ + +require 'minitest/autorun' +require 'lib/test-helpers' + +class TestQuick < MiniTest::Test + + include TestHelpers + + def setup + end + + def test_linear_model + assert gemma("-g ./example/mouse_hs1940.geno.txt.gz \ + -p ./example/mouse_hs1940.pheno.txt \ + -n 1 \ + -a ./example/mouse_hs1940.anno.txt \ + -lm \ + -o mouse_hs1940_CD8_lm") + + expect('output/mouse_hs1940_CD8_lm.assoc.txt',[[2,1,"rs3707673"], + [2,10,"5.252187e-05"], + [3,9,"3.909916e-02"]]) + end + +end |