diff options
Diffstat (limited to 'src/varcov.cpp')
| -rw-r--r-- | src/varcov.cpp | 2 |
1 files changed, 2 insertions, 0 deletions
diff --git a/src/varcov.cpp b/src/varcov.cpp index 0f87ba8..39c3523 100644 --- a/src/varcov.cpp +++ b/src/varcov.cpp @@ -247,6 +247,7 @@ void Calc_Cor(vector<vector<double>> &X_mat, vector<double> &cov_vec) { // genotype file and calculate the covariance matrix for neighboring // SNPs output values at 10000-SNP-interval. void VARCOV::AnalyzeBimbam() { + debug_msg("entering"); igzstream infile(file_geno.c_str(), igzstream::in); if (!infile) { cout << "error reading genotype file:" << file_geno << endl; @@ -345,6 +346,7 @@ void VARCOV::AnalyzeBimbam() { } void VARCOV::AnalyzePlink() { + debug_msg("entering"); string file_bed = file_bfile + ".bed"; ifstream infile(file_bed.c_str(), ios::binary); if (!infile) { |