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-rw-r--r--src/lm.cpp6
1 files changed, 3 insertions, 3 deletions
diff --git a/src/lm.cpp b/src/lm.cpp
index d3ad7f3..94729db 100644
--- a/src/lm.cpp
+++ b/src/lm.cpp
@@ -412,13 +412,13 @@ void LM::Analyzebgen (const gsl_matrix *W, const gsl_vector *y) {
string chr;
std::cout << "Warning: WJA hard coded SNP missingness " <<
"threshold of 10%" << std::endl;
-
+
// Start reading genotypes and analyze.
for (size_t t=0; t<indicator_snp.size(); ++t) {
if (t%d_pace==0 || t==(ns_total-1)) {
ProgressBar ("Reading SNPs ", t, ns_total-1);
}
-
+
// Read SNP header.
id.clear();
rs.clear();
@@ -500,7 +500,7 @@ void LM::Analyzebgen (const gsl_matrix *W, const gsl_vector *y) {
static_cast<double>(unzipped_data[i*3+1])/32768.0;
bgen_geno_prob_BB=
static_cast<double>(unzipped_data[i*3+2])/32768.0;
-
+
// WJA
bgen_geno_prob_non_miss=
bgen_geno_prob_AA +