diff options
Diffstat (limited to 'src/lm.cpp')
-rw-r--r-- | src/lm.cpp | 4 |
1 files changed, 4 insertions, 0 deletions
@@ -290,6 +290,7 @@ void LmCalcP(const size_t test_mode, const double yPwy, const double xPwy, } void LM::AnalyzeGene(const gsl_matrix *W, const gsl_vector *x) { + debug_msg("entering"); ifstream infile(file_gene.c_str(), ifstream::in); if (!infile) { cout << "error reading gene expression file:" << file_gene << endl; @@ -382,6 +383,7 @@ void LM::AnalyzeGene(const gsl_matrix *W, const gsl_vector *x) { // WJA added void LM::Analyzebgen(const gsl_matrix *W, const gsl_vector *y) { + debug_msg("entering"); string file_bgen = file_oxford + ".bgen"; ifstream infile(file_bgen.c_str(), ios::binary); if (!infile) { @@ -606,6 +608,7 @@ void LM::Analyzebgen(const gsl_matrix *W, const gsl_vector *y) { } void LM::AnalyzeBimbam(const gsl_matrix *W, const gsl_vector *y) { + debug_msg("entering"); igzstream infile(file_geno.c_str(), igzstream::in); if (!infile) { cout << "error reading genotype file:" << file_geno << endl; @@ -720,6 +723,7 @@ void LM::AnalyzeBimbam(const gsl_matrix *W, const gsl_vector *y) { } void LM::AnalyzePlink(const gsl_matrix *W, const gsl_vector *y) { + debug_msg("entering"); string file_bed = file_bfile + ".bed"; ifstream infile(file_bed.c_str(), ios::binary); if (!infile) { |