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+/*
+ Genome-wide Efficient Mixed Model Association (GEMMA)
+ Copyright (C) 2011 Xiang Zhou
+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+*/
+
+#ifndef __GEMMA_H__
+#define __GEMMA_H__
+
+#ifdef FORCE_FLOAT
+#include "param_float.h"
+#else
+#include "param.h"
+#endif
+
+using namespace std;
+
+class GEMMA {
+
+public:
+ //parameters
+ string version;
+ string date;
+ string year;
+
+ //constructor
+ GEMMA(void);
+
+ //functions
+ void PrintHeader (void);
+ void PrintHelp (size_t option);
+ void PrintLicense (void);
+ void Assign (int argc, char **argv, PARAM &cPar);
+ void BatchRun (PARAM &cPar);
+ void WriteLog (int argc, char **argv, PARAM &cPar);
+};
+
+
+#endif
+