diff options
| -rw-r--r-- | src/gemma.cpp | 4 | ||||
| -rw-r--r-- | src/gemma_io.cpp | 2 |
2 files changed, 3 insertions, 3 deletions
diff --git a/src/gemma.cpp b/src/gemma.cpp index 7b955cd..1938e56 100644 --- a/src/gemma.cpp +++ b/src/gemma.cpp @@ -1129,7 +1129,7 @@ void GEMMA::Assign(int argc, char **argv, PARAM &cPar) { break; } if (argv[i + 1] == NULL || argv[i + 1][0] == '-') { - cPar.a_mode = M_KIN; + cPar.a_mode = M_KIN; // default continue; } ++i; @@ -1913,7 +1913,7 @@ void GEMMA::BatchRun(PARAM &cPar) { if (cPar.a_mode == M_KIN) { cPar.WriteMatrix(G, "cXX"); - } else { + } else { // M_KIN2 cPar.WriteMatrix(G, "sXX"); } diff --git a/src/gemma_io.cpp b/src/gemma_io.cpp index 3302bad..b4f8d39 100644 --- a/src/gemma_io.cpp +++ b/src/gemma_io.cpp @@ -1671,7 +1671,7 @@ bool PlinkKin(const string &file_bed, vector<int> &indicator_snp, gsl_vector_add_constant(geno, -1.0 * geno_mean); - if (k_mode == 2 && geno_var != 0) { + if (k_mode == 2 && geno_var != 0) { // k_mode is a_mode-20 gsl_vector_scale(geno, 1.0 / sqrt(geno_var)); } gsl_vector_view Xlarge_col = gsl_matrix_column(Xlarge, ns_test % msize); |