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| -rw-r--r-- | README.md | 1 | ||||
| -rw-r--r-- | guix.scm | 8 |
2 files changed, 5 insertions, 4 deletions
diff --git a/README.md b/README.md index 3239ab9..1ed831d 100644 --- a/README.md +++ b/README.md @@ -7,6 +7,7 @@ GEMMA is the original software toolkit for fast application of linear mixed mode NOTE: December 2024 main software development has moved to [PanGEMMA](https://git.genenetwork.org/pangemma/about/)! Pangemma is essentially a fork of GEMMA that is meant to scale up for pangenomics. We are also taking the opportunity to revamp the code base. GEMMA itself is in *maintenance* mode. +See also [Speeding up GEMMA](https://issues.genenetwork.org/issues/genetics/speeding-up-gemma). Check out [RELEASE-NOTES.md](./RELEASE-NOTES.md) to see what's new in each release. diff --git a/guix.scm b/guix.scm index 2e2de52..ca4d365 100644 --- a/guix.scm +++ b/guix.scm @@ -1,6 +1,6 @@ ;; To use this file to build HEAD of pangemma: ;; -;; guix build -f guix.scm +;; guix build -f guix.scm --tune=native ;; ;; To get a development container (e.g., run in emacs shell). ;; @@ -18,6 +18,7 @@ (gnu packages compression) (gnu packages build-tools) (gnu packages databases) + (gnu packages gcc) (gnu packages guile) (gnu packages maths) (gnu packages pkg-config) @@ -47,11 +48,10 @@ (file-name (git-file-name name version)) (sha256 (base32 "1www519kfm0lq4g79i8hpfydwnfrf6p21fqrqcfl2sv072rghygj")))) - (build-system copy-build-system) + (build-system copy-build-system) ;; This is a headed only package (arguments (list #:install-plan #~'(("include/lmdbxx/lmdb++.h" "include/lmdb++.h")))) - (properties '((tunable? . #t))) (home-page "https://github.com/hoytech/lmdbxx") (synopsis "C++17 wrapper for the LMDB database library") (description "Header-only C++17 wrapper for the LMDB embedded @@ -68,7 +68,7 @@ key-value store, with string_view-based API.") (list gsl guile-3.0 lmdb - openblas + openblas ;; already optimized for AVX-512 kernels alongside SSE2/AVX2/etc. zlib)) (native-inputs (list lmdbxx |