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| author | Pjotr Prins | 2025-12-04 12:37:48 +0100 |
|---|---|---|
| committer | Pjotr Prins | 2025-12-04 12:37:48 +0100 |
| commit | d95db7c5f117bc945b224bd8815feb8c0076e7ba (patch) | |
| tree | 74f5341974e9ebc0762176f932324deadf477fab /src/lmm.h | |
| parent | aa1f2d54b052e0830c327828dc759938b29ac2a9 (diff) | |
| download | pangemma-d95db7c5f117bc945b224bd8815feb8c0076e7ba.tar.gz | |
Output has same values as original!
Diffstat (limited to 'src/lmm.h')
| -rw-r--r-- | src/lmm.h | 9 |
1 files changed, 5 insertions, 4 deletions
diff --git a/src/lmm.h b/src/lmm.h index c24872c..35064c7 100644 --- a/src/lmm.h +++ b/src/lmm.h @@ -45,9 +45,14 @@ public: size_t e_mode; }; +typedef tuple< string, uint16_t, uint32_t, uint32_t > MarkerChrPos; +typedef vector<MarkerChrPos> Markers; +typedef tuple< string,vector<double> > SnpNameValues; +typedef tuple< bool,MarkerChrPos,vector<double> > SnpNameValues2; // Results for LMM. class SUMSTAT2 { public: + MarkerChrPos markerinfo; double beta; // REML estimator for beta. double se; // SE for beta. double lambda_remle; // REML estimator for lambda. @@ -60,10 +65,6 @@ public: // see https://github.com/genetics-statistics/GEMMA/issues/81 }; -typedef tuple< string, uint16_t, uint32_t, uint32_t > MarkerChrPos; - -typedef tuple< string,vector<double> > SnpNameValues; -typedef tuple< bool,MarkerChrPos,vector<double> > SnpNameValues2; class LMM { |
