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authorPjotr Prins2025-12-04 12:37:48 +0100
committerPjotr Prins2025-12-04 12:37:48 +0100
commitd95db7c5f117bc945b224bd8815feb8c0076e7ba (patch)
tree74f5341974e9ebc0762176f932324deadf477fab /src/lmm.h
parentaa1f2d54b052e0830c327828dc759938b29ac2a9 (diff)
downloadpangemma-d95db7c5f117bc945b224bd8815feb8c0076e7ba.tar.gz
Output has same values as original!
Diffstat (limited to 'src/lmm.h')
-rw-r--r--src/lmm.h9
1 files changed, 5 insertions, 4 deletions
diff --git a/src/lmm.h b/src/lmm.h
index c24872c..35064c7 100644
--- a/src/lmm.h
+++ b/src/lmm.h
@@ -45,9 +45,14 @@ public:
   size_t e_mode;
 };
 
+typedef tuple< string, uint16_t, uint32_t, uint32_t > MarkerChrPos;
+typedef vector<MarkerChrPos> Markers;
+typedef tuple< string,vector<double> > SnpNameValues;
+typedef tuple< bool,MarkerChrPos,vector<double> > SnpNameValues2;
 // Results for LMM.
 class SUMSTAT2 {
 public:
+  MarkerChrPos markerinfo;
   double beta;         // REML estimator for beta.
   double se;           // SE for beta.
   double lambda_remle; // REML estimator for lambda.
@@ -60,10 +65,6 @@ public:
                        // see https://github.com/genetics-statistics/GEMMA/issues/81
 };
 
-typedef tuple< string, uint16_t, uint32_t, uint32_t > MarkerChrPos;
-
-typedef tuple< string,vector<double> > SnpNameValues;
-typedef tuple< bool,MarkerChrPos,vector<double> > SnpNameValues2;
 
 class LMM {