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authorxiangzhou2014-09-22 11:12:46 -0400
committerxiangzhou2014-09-22 11:12:46 -0400
commit9aa9f76cb16a0e71fea19dd125761034aaca4fd4 (patch)
tree450932dba530a3e5cbd5b0c0736eaad5ad9720a7 /gemma.h
parent7762722f264adc402ea3b0f21923b18f072253ba (diff)
downloadpangemma-9aa9f76cb16a0e71fea19dd125761034aaca4fd4.tar.gz
version 0.95alpha
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diff --git a/gemma.h b/gemma.h
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-/*
-	Genome-wide Efficient Mixed Model Association (GEMMA)
-    Copyright (C) 2011  Xiang Zhou
-
-    This program is free software: you can redistribute it and/or modify
-    it under the terms of the GNU General Public License as published by
-    the Free Software Foundation, either version 3 of the License, or
-    (at your option) any later version.
-
-    This program is distributed in the hope that it will be useful,
-    but WITHOUT ANY WARRANTY; without even the implied warranty of
-    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    GNU General Public License for more details.
-
-    You should have received a copy of the GNU General Public License
-    along with this program.  If not, see <http://www.gnu.org/licenses/>.
-*/
-
-#ifndef __GEMMA_H__                
-#define __GEMMA_H__
-
-#ifdef FORCE_FLOAT
-#include "param_float.h"
-#else
-#include "param.h"
-#endif
-
-using namespace std;
-
-class GEMMA {
-
-public:			
-	//parameters
-	string version;
-	string date;
-	string year;
-	
-	//constructor
-	GEMMA(void);
-	
-	//functions
-	void PrintHeader (void);
-	void PrintHelp (size_t option);
-	void PrintLicense (void);
-	void Assign (int argc, char **argv, PARAM &cPar);
-	void BatchRun (PARAM &cPar);
-	void WriteLog (int argc, char **argv, PARAM &cPar);
-};
-
-
-#endif
-