aboutsummaryrefslogtreecommitdiff
path: root/gn/packages/python.scm
blob: a5d71f6d5cb98ada3c6943e17685df15db3b0f11 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
(define-module (gn packages python)
  #:use-module ((guix licenses) #:prefix license:)
  #:use-module (gnu packages)
  #:use-module (gnu packages attr)
  #:use-module (gnu packages base)
  #:use-module (gnu packages compression)
  #:use-module (gnu packages databases)
  #:use-module (gnu packages fontutils)
  #:use-module (gnu packages gcc)
  #:use-module (gnu packages ghostscript)
  #:use-module (gnu packages glib)
  #:use-module (gnu packages gnupg)
  #:use-module (gnu packages gtk)
  #:use-module (gnu packages icu4c)
  #:use-module (gnu packages image)
  #:use-module (gnu packages imagemagick)
  #:use-module (gnu packages libffi)
  #:use-module (gnu packages linux)
  #:use-module (gnu packages maths)
  #:use-module (gnu packages multiprecision)
  #:use-module (gnu packages networking)
  #:use-module (gnu packages ncurses)
  #:use-module (gnu packages pcre)
  #:use-module (gnu packages perl)
  #:use-module (gnu packages python)
  #:use-module (gnu packages pkg-config)
  #:use-module (gnu packages readline)
  #:use-module (gnu packages statistics)
  #:use-module (gnu packages texlive)
  #:use-module (gnu packages texinfo)
  #:use-module (gnu packages tls)
  #:use-module (gnu packages web)
  #:use-module (gnu packages xml)
  #:use-module (gnu packages xorg)
  #:use-module (gnu packages zip)
  #:use-module (guix packages)
  #:use-module (guix download)
  #:use-module (guix git-download)
  #:use-module (guix utils)
  #:use-module (guix build-system gnu)
  #:use-module (guix build-system python)
  #:use-module (guix build-system trivial)
  #:use-module (srfi srfi-1))

(define-public python-flask
(package
  (name "python-flask")
  (version "0.10.1")
  (source
    (origin
      (method url-fetch)
      (uri (pypi-uri "Flask" version))
      (sha256
        (base32
          "0wrkavjdjndknhp8ya8j850jq7a1cli4g5a93mg8nh1xz2gq50sc"))))
  (build-system python-build-system)
  (inputs
   `(("python-setuptools" ,python-setuptools)
     ; ("python-itsdangerous" ,python-itsdangerous)
     ; ("python-jinja2" ,python-jinja2)
     ; ("python-werkzeug" ,python-werkzeug)
     ))
  (propagated-inputs
   `(
     ("python-itsdangerous" ,python-itsdangerous)
     ("python-jinja2" ,python-jinja2)
     ("python-werkzeug" ,python-werkzeug)
     ))
  
  (arguments
   `(#:tests? #f)) ; No tests
  (home-page "http://github.com/mitsuhiko/flask/")
  (synopsis
    "A microframework based on Werkzeug, Jinja2 and good intentions")
  (description
    "A microframework based on Werkzeug, Jinja2 and good intentions")
  (license license:bsd-3)))

(define-public python2-flask
  (package-with-python2 python-flask))

(define-public python-xlsxwriter
(package
  (name "python-xlsxwriter")
  (version "0.8.4")
  (source
    (origin
      (method url-fetch)
      (uri (pypi-uri "XlsxWriter" version))
      (sha256
        (base32
          "0hv6bknnj9mlvvkdnlzycs0s97vrakmyh91ddb7ynjaqp8gl434z"))))
  (build-system python-build-system)
  (inputs
    `(("python-setuptools" ,python-setuptools)))
  (home-page
    "https://github.com/jmcnamara/XlsxWriter")
  (synopsis
    "A Python module for creating Excel XLSX files.")
  (description
    "A Python module for creating Excel XLSX files.")
  (license license:bsd-3)))

(define-public python2-xlsxwriter
  (package-with-python2 python-xlsxwriter))

(define-public python-rdflib-jsonld
  (package
    (name "python-rdflib-jsonld")
    (version "0.3")
    (source
      (origin
        (method url-fetch)
        (uri (string-append
               "https://pypi.python.org/packages/source/r/rdflib-jsonld/rdflib-jsonld-"
               version
               ".tar.gz"))
        (sha256
          (base32
            "121a876k49xl85jvikyh4hzvm34456ikw66cra5dfyr15br1qjll"))))
    (build-system python-build-system)
    (inputs
      `(("python-setuptools" ,python-setuptools)))
    (propagated-inputs
     `(("python-rdflib-4.2" ,python-rdflib-4.2)
       ("python-pyparsing" ,python-pyparsing)
       ("python-html5lib" ,python-html5lib)
       ("python-nose" ,python-nose)
))
    (home-page
      "https://github.com/RDFLib/rdflib-jsonld")
    (synopsis
      "rdflib extension adding JSON-LD parser and serializer")
    (description
      "rdflib extension adding JSON-LD parser and serializer")
    (license license:bsd-3)))

(define-public python2-rdflib-jsonld
  (package-with-python2 python-rdflib-jsonld))


(define-public python-rdflib-4.2
  (package
    (name "python-rdflib-4.2")
    (version "4.2.0")
    (source
      (origin
        (method url-fetch)
        (uri (string-append
              "https://pypi.python.org/packages/source/r/rdflib/rdflib-"
              version
              ".tar.gz"))
        (patches
          ;; The patch has no effect under Python 3.
          (list (search-patch "python2-rdflib-drop-sparqlwrapper.patch")))
        (sha256
          (base32
            "1h3f8yl9frjz8rsykjdjk83qsrcvld3qa7pkzh69s91h97ydl83l"))))
    (build-system python-build-system)
    (inputs
      `(("python-html5lib" ,python-html5lib)
        ("python-isodate" ,python-isodate)
        ("python-pyparsing" ,python-pyparsing)
        ("python-setuptools" ,python-setuptools)))
    (arguments `(#:tests? #f)) ;; No tests.
    (home-page "https://github.com/RDFLib/rdflib")
    (synopsis
      "Python RDF library")
    (description
      "RDFLib is a Python library for working with RDF, a simple yet
powerful language for representing information.")
    (license (license:non-copyleft "file://LICENSE"
                           "See LICENSE in the distribution."))))

(define-public python2-rdflib-4.2
  (let ((base (package-with-python2 python-rdflib-4.2)))
    (package
      (inherit base)
      (inputs
        (append (package-inputs base)
                `(("python-nose" ,python-nose))))
      (arguments
        `(#:python ,python-2
          #:tests? #f))))) ; 3 tests fail, also outside Guix

(define-public python-avro
(package
  (name "python-avro")
  (version "1.7.7")
  (source
    (origin
      (method url-fetch)
      (uri (string-append
             "https://pypi.python.org/packages/source/a/avro/avro-"
             version
             ".tar.gz"))
      (sha256
        (base32
          "0n21lfclah7bmqnnqfqmpsrimz0s86qkxyn972jynq234n1lyynf"))))
  (build-system python-build-system)
  (inputs
    `(("python-setuptools" ,python-setuptools)))
  (home-page "http://hadoop.apache.org/avro")
  (synopsis
    "Avro is a serialization and RPC framework.")
  (description
    "Avro is a serialization and RPC framework.")
  (license #f)))

(define-public python2-avro
  (package-with-python2 python-avro))

(define-public python-shellescape
(package
  (name "python-shellescape")
  (version "3.4.1")
  (source
    (origin
      (method url-fetch)
      (uri (string-append
             "https://pypi.python.org/packages/source/s/shellescape/shellescape-"
             version
             ".tar.gz"))
      (sha256
        (base32
          "0n5ky1b2vw2y0d4xl3qybyp2rk0gq5frjs8nr8ak6mgj2fyb4676"))))
  (build-system python-build-system)
  (inputs
    `(("python-setuptools" ,python-setuptools)))
  (home-page
    "https://github.com/chrissimpkins/shellescape")
  (synopsis
    "Shell escape a string to safely use it as a token in a shell command (backport of Python shlex.quote for Python versions 2.x & < 3.3)")
  (description
    "Shell escape a string to safely use it as a token in a shell command (backport of Python shlex.quote for Python versions 2.x & < 3.3)")
  (license expat))
)

(define-public python2-shellescape
  (package-with-python2 python-shellescape))

(define-public python-mysqlclient
(package
  (name "python-mysqlclient")
  (version "1.3.7")
  (source
    (origin
      (method url-fetch)
      (uri (pypi-uri "mysqlclient" version))
      (sha256
        (base32
          "06qzgwk7j66k8ggx51i6wxx0f0zsppp7w4bh6gjd0cr9rfs86jn7"))))
  (build-system python-build-system)
  (inputs
   `(
     ("mysql" ,mysql)
     ("python-nose" ,python-nose)
     ("zlib" ,zlib)
     ("openssl" ,openssl)
     ("libgcrypt" ,libgcrypt)
     ))
  (propagated-inputs
   `(("python-setuptools" ,python-setuptools)
     ))
  (arguments
   `(#:tests? #f))   ; wants a running MySQL server
  (home-page
    "https://github.com/PyMySQL/mysqlclient-python")
  (synopsis "Python interface to MySQL")
  (description "Python interface to MySQL")
  (license license:gpl3)))

(define-public python2-mysqlclient
  (package-with-python2 python-mysqlclient))

(define-public python2-htmlgen-old
(package
  (name "python2-htmlgen-old")
  (version "2.2.2")
  (source (origin
           (method url-fetch)
           (uri (string-append
                 "http://ftp.nl.debian.org/debian/pool/main/h/htmlgen/htmlgen_"
version ".orig.tar.gz"))
           (sha256
            (base32
             "186kb434q6z84g31ysvzi4kcfcvl3pmm57k4jlng4ccgls94x6wb"))
           (patches (list
                     (search-patch "python2-htmlgen-Applied-Deb-patch.patch")
                     (search-patch "python2-htmlgen-Fix-test-for-random.patch")
            ))))
  (build-system gnu-build-system)
  (outputs
   '("out"))
  (native-inputs `(("tar" ,tar)
                   ("gzip" ,gzip)))
  (inputs
   `(("make" ,gnu-make)))
  (propagated-inputs
   `(("python2" ,python-2)))
  (arguments
   `(#:modules ((guix build utils))
     #:builder
     (let* ((source (assoc-ref %build-inputs "source"))
            (tar    (assoc-ref %build-inputs "tar"))
            (gzip   (assoc-ref %build-inputs "gzip"))
            (output (assoc-ref %outputs "out"))
            (srcdir (string-append output "/src"))
            (lib (string-append (assoc-ref %outputs "out") "/lib/htmlgen"))
            (python (string-append (assoc-ref %build-inputs "python2") "/bin/")))
       (begin
         (use-modules (guix build utils))
         (setenv "PATH" (string-append gzip "/bin")) ;; for tar
         ;; (setenv "PATH" (string-append python "/bin"))
         (system* (string-append tar "/bin/tar") "xzf"
                  source)
         (chdir ,(string-append name "-" version))
         (mkdir-p srcdir)
         (lambda _
           (system* "python" "-m" "compileall" "."))
         (lambda _
           (system* "make" "test"))
         (mkdir-p lib)
                                        ; (copy-file "." lib)
         (copy-file "HTMLgen.pyc" lib)
         ))))
  (home-page
    "https://packages.debian.org/unstable/python/python-htmlgen")
  (synopsis "Python2 HTMLgen (somewhat defunkt project)")
  (description #f)
  (license #f)))

(define-public python2-htmlgen
(package
  (name "python2-htmlgen")
  (version "2.2.2")
  (source (origin
           (method url-fetch)
           (uri (string-append
                 "http://ftp.nl.debian.org/debian/pool/main/h/htmlgen/htmlgen_"
version ".orig.tar.gz"))
           (sha256
            (base32
             "186kb434q6z84g31ysvzi4kcfcvl3pmm57k4jlng4ccgls94x6wb"))
           (patches (list
                     (search-patch "python2-htmlgen-Applied-Deb-patch.patch")
                     (search-patch "python2-htmlgen-Fix-test-for-random.patch")
            ))))
  (build-system python-build-system)
  (outputs '("out"))
  (native-inputs
   `(("make" ,gnu-make)
     ))
  (propagated-inputs
   `(("python2" ,python-2)))
  (arguments
   `(#:phases (modify-phases %standard-phases
     (replace 'build
              (lambda _
                (system* "python2" "-m" "compileall" ".")))
     (replace 'install
              (lambda* (#:key outputs #:allow-other-keys)
                       (let* ((out (assoc-ref outputs "out"))
                              (include (string-append out "/include"))
                              (lib2 (string-append out "/lib/htmlgen"))
                              (lib (string-append (assoc-ref %outputs "out") "/lib/python2.7/site-packages/htmlgen"))
                              (pkgconfig (string-append out "/lib/pkgconfig"))
                              (doc (string-append out "/share/doc")))
                         ;; Install libs and headers.
                         ;; (copy-file "HTMLgen.pyc" "HTMLgen2.pyc")
                         (install-file "HTMLgen.pyc" lib)
                         (install-file "HTMLgen2.pyc" lib)
                         (install-file "__init__.pyc" lib)
              ))) ; install 
     ) ; phases
     #:tests? #f))
  (home-page
    "https://packages.debian.org/unstable/python/python-htmlgen")
  (synopsis "Python2 HTMLgen (somewhat defunkt project)")
  (description #f)
  (license #f)))

(define-public python2-numarray
  (package
    (name "python2-numarray")
    (version "1.5.2")
    (source
     (origin
       (method url-fetch)
       (uri (string-append
             ;; http://sourceforge.net/projects/numpy/files/Old%20Numarray/1.5.2/numarray-1.5.2.tar.gz/download
             "mirror://sourceforge/numpy/numarray-" version ".tar.gz"
             ))
       (file-name (string-append name "-" version ".tar.gz"))
       (sha256
        (base32
         "0x1i4j7yni7k4p9kjxs1lgln1psdmyrz65wp2yr35yn292iw2vbg"))))
    (build-system python-build-system)
    ;; (native-inputs
    ;; `(("python-setuptools" ,python-setuptools)))
    (arguments
     `(#:python ,python-2
       #:tests? #f))   ; no 'setup.py test' really!
    (home-page "http://www.numpy.org/")
    (synopsis "Numerical library array processing of numbers, strings, records and objects")
    (description
     "Numarray is an array processing package designed to efficiently manipulate large multi-dimensional arrays. Numarray is modelled after Numeric and features c-code generated from python template scripts, the capacity to operate directly on arrays in files, and improved type promotions. Numarray provides support for manipulating arrays consisting of numbers, strings, records, or objects using the same basic infrastructure and syntax.  Numarray is now part of the
numpy package, though some legacy software still uses the older versions.")
    (license license:gpl2))) ; actualy PyRAF http://www.stsci.edu/resources/software_hardware/pyraf/LICENSE