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(define-module (gn packages crates-io)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (gnu packages)
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix utils)
#:use-module (guix build-system cargo)
#:use-module (gnu packages crates-io)
#:use-module (gnu packages rust))
;; Please keep these packages sorted alphabetically
(define-public rust-bytemuck-1.3
(package
(inherit rust-bytemuck-1)
(name "rust-bytemuck")
(version "1.3.1")
(source
(origin
(method url-fetch)
(uri (crate-uri "bytemuck" version))
(file-name
(string-append name "-" version ".tar.gz"))
(sha256
(base32
"1scaac5xbfynzbpvz9yjbmg9ag2jalxfijapwlqh7xldf4li0ynv"))))))
(define-public rust-handlegraph-0.3
(package
(name "rust-handlegraph")
(version "0.3.0")
(source
(origin
(method url-fetch)
(uri (crate-uri "handlegraph" version))
(file-name
(string-append name "-" version ".tar.gz"))
(sha256
(base32
"1sj100w4lpj7798pws85qrfrzsily5hhzh6j118rwf56sgic1yml"))))
(build-system cargo-build-system)
(arguments
`(#:rust ,rust-1.42
#:cargo-inputs
(("rust-bstr" ,rust-bstr-0.2)
("rust-gfa" ,rust-gfa-0.6))))
(home-page "https://github.com/chfi/rs-handlegraph")
(synopsis "Library for use in variation graphs")
(description
"This package provides a Rust implementation of VG handle graph.")
(license license:expat)))
(define-public rust-gfa-0.6
(package
(name "rust-gfa")
(version "0.6.2")
(source
(origin
(method url-fetch)
(uri (crate-uri "gfa" version))
(file-name
(string-append name "-" version ".tar.gz"))
(sha256
(base32
"0ghmy4r0324s6vvmj9nmh326346nkwm7nybnpcpswnjvf02b85gw"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-bstr" ,rust-bstr-0.2)
("rust-bytemuck" ,rust-bytemuck-1.3)
("rust-lazy-static" ,rust-lazy-static-1)
("rust-nom" ,rust-nom-5)
("rust-regex" ,rust-regex-1)
("rust-serde" ,rust-serde-1))
#:cargo-development-inputs
(("rust-criterion" ,rust-criterion-0.3))))
(home-page "https://github.com/chfi/rs-gfa")
(synopsis "Library for graphs in the GFA (Graphical Fragment Assembly) format")
(description
"This package provides a library for working with graphs in the
@acronym{GFA, Graphical Fragment Assembly} format.")
(license license:expat)))
(define-public rust-ndarray-0.12
(package
(name "rust-ndarray")
(version "0.12.1")
(source
(origin
(method url-fetch)
(uri (crate-uri "ndarray" version))
(file-name (string-append name "-" version ".crate"))
(sha256
(base32
"0a5rfwcbqnvbwi3nw5sfz6kf0flhmjxs64s0b4kxc6lhmyl81wvw"))))
(build-system cargo-build-system)
(arguments
`(#:skip-build? #t
#:cargo-inputs
(("rust-itertools" ,rust-itertools-0.7)
("rust-matrixmultiply" ,rust-matrixmultiply-0.1)
("rust-num-complex" ,rust-num-complex-0.2)
;("rust-blas-src" ,rust-blas-src-0.2)
("rust-cblas-sys" ,rust-cblas-sys-0.1)
("rust-rustc-serialize" ,rust-rustc-serialize-0.3)
("rust-serde" ,rust-serde-1))
#:cargo-development-inputs
(("rust-defmac" ,rust-defmac-0.1)
("rust-quickcheck" ,rust-quickcheck-0.7)
("rust-rawpointer" ,rust-rawpointer-0.1))))
(home-page "https://github.com/rust-ndarray/ndarray")
(synopsis "n-dimensional container for general elements and for numerics")
(description "@code{ndarray} implements an n-dimensional container for
general elements and for numerics.")
(license (list license:asl2.0
license:expat))))
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