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(define-module (gn packages ccwl)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix utils)
#:use-module (guix download)
#:use-module (guix build-system gnu)
#:use-module (gnu packages bioinformatics)
#:use-module (gnu packages compression)
#:use-module (gnu packages graphviz)
#:use-module (gnu packages guile)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages skribilo))
(define-public ccwl
(package
(name "ccwl")
(version "0.1.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/arunisaac/ccwl"
"/releases/download/v" version
"/ccwl-" version ".tar.lz"))
(sha256
(base32 "0zj8rsmh82ip9ngq65is3yfbpn9y0acil4llwrr4jw2fiyyji7x1"))))
(build-system gnu-build-system)
(arguments
`(#:make-flags '("GUILE_AUTO_COMPILE=0"))) ;to prevent guild warnings
(propagated-inputs
`(("guile" ,guile-3.0)))
(native-inputs
`(("guile" ,guile-3.0)
("lzip" ,lzip)
("pkg-config" ,pkg-config)
;; For the documentation:
("cwltool" ,cwltool)
("graphviz" ,graphviz)
("skribilo" ,skribilo)))
(home-page "https://ccwl.systemreboot.net/")
(synopsis "Concise Common Workflow Language")
(description
"The @acronym{Concise Common Workflow Languager, ccwl} is a concise syntax
to express CWL workflows. It is implemented as an @acronym{Embedded Domain
Specific Language, EDSL} in the Scheme programming language, a minimalist
dialect of the Lisp family of programming languages. @code{ccwl} is a compiler
to generate CWL workflows from concise descriptions in ccwl.")
(license license:gpl3+)))
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