From 51bfac8ff651f778df6e5320141898fcbaa724e2 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Tue, 19 Jan 2016 11:20:41 +0300 Subject: Started packaging GN --- gn/packages/bioinformatics.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) (limited to 'gn') diff --git a/gn/packages/bioinformatics.scm b/gn/packages/bioinformatics.scm index 27d9fb7..8fe8708 100644 --- a/gn/packages/bioinformatics.scm +++ b/gn/packages/bioinformatics.scm @@ -118,3 +118,25 @@ "Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.") (license license:gpl2+))) + +(define-public genenetwork + (let ((commit "90417f439")) + (package + (name "genenetwork") + (version (string-append "2.0." commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/genenetwork/genenetwork2.git") + (commit commit))) + (sha256 + (base32 + "0njplyalwwqh7xr7xc7klc6x06mq0ak8w2pxh85w8n4hxkmqqnf5")))) + (inputs `(("nginx" ,nginx) + ("python" ,python-2 + ))) + (build-system trivial-build-system) + (home-page "http://genenetwork.org/") + (synopsis "Full genenetwork services") + (description "Genenetwork installation sumo.") + (license license:agpl3+)))) -- cgit v1.2.3