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2019-12-22gn: Add php-5.6Efraim Flashner
2019-12-22Revert "Removed python-science and crates-io to build with latest guix"Efraim Flashner
This reverts commit adbf2a07ea0274f718b60ef5ba3a7786360552d1.
2019-12-22add header to myserver.scmEfraim Flashner
2019-12-22Removed python-science and crates-io to build with latest guixpjotrp
2019-12-22Merge branch 'master' of gitlab.com:genenetwork/guix-bioinformaticspjotrp
2019-12-21Add nginx listening on 8080pjotrp
2019-12-18wip: singlecellrshiny is not yet completeEfraim Flashner
2019-12-18services: use installed giteaEfraim Flashner
2019-12-18Update bnw package and service.Efraim Flashner
2019-12-18Machinespjotrp
2019-12-16copy default nginxpjotrp
2019-12-10gn: Remove r-qtl2.Efraim Flashner
This package is now upstream.
2019-12-09gn: Remove python-pytest-timeout.Efraim Flashner
Package upstreamed.
2019-12-09gn: Remove python-ujson.Efraim Flashner
Package upstreamed.
2019-12-09gn: Remove gunicorn.Efraim Flashner
This package was upstreamed.
2019-12-09gn: Remove python-async-timeout.Efraim Flashner
This package is already upstreamed.
2019-12-04gn: Add r-qtl2.Efraim Flashner
2019-12-03gn: ratspub: Update package and definition.Efraim Flashner
2019-12-03gn: Adjust import for upstream changesEfraim Flashner
2019-12-02gn: edirect-gn: Install more files.Efraim Flashner
2019-12-01gn: python-flufl: Fix descriptionEfraim Flashner
2019-11-25gn: seqwish: Link against dynamic sdsl-lite library.Efraim Flashner
2019-11-25gn: boost-static: Upstreamed.Efraim Flashner
* gn/packages/boost.scm (boost-static): Remove variable.
2019-11-25gn: gitea: Update to 1.9.6.Efraim Flashner
2019-11-25gn: Remove sdsl-lite-gn.Efraim Flashner
We can use libdivsufsort from (gnu packages bioinformatics). * gn/packages/bioinformatics.scm (sdsl-lite-gn): Remove variable. (seqwish, graphaligner)[inputs]: Remove sdsl-lite-gn. Add sdsl-lite, libdivsufsort. [arguments]: Adjust for change in inputs.
2019-11-24gn: Add graphaligner, mummer.Efraim Flashner
* gn/packages/bioinformatics.scm (graphaligner, mummer): New variables.
2019-11-24gn: Add boost-static.Efraim Flashner
* gn/packages/boost.scm (boost-static): New variable.
2019-11-21gn: rn6-assembly-error-app: Use pngs from static location.Efraim Flashner
* gn/packages/bioinformatics.scm (rn6-assembly-error-app): Search for pngs in gn-rshiny'S $HOME rather than in /gnu/store.
2019-11-19gn: Add seqwish.Efraim Flashner
2019-11-18gn: Mailman updates with thanks to Florian Pelz.Efraim Flashner
2019-11-18gn: Follow upstream on package naming.Efraim Flashner
* gn/packages/mailman.scm: Rename packages from python-foo.bar to python-foo-bar.
2019-11-17gn: helm: Update to 3.0.0.Efraim Flashner
2019-11-14gn: Add kubernetes,crictl 1.13Efraim Flashner
2019-11-14gn: Add kubernetes, crictl 1.14Efraim Flashner
2019-11-14gn: Update kubernetes versionsEfraim Flashner
2019-11-12gn: Build crictl from source.Efraim Flashner
2019-11-12gn: Add kubernetes-1.15Efraim Flashner
2019-11-12gn: kubernetes: propagate crictl.Efraim Flashner
* gn/packages/kubernetes.scm (kubernetes)[propagated-inputs]: Add crictl.
2019-11-11gn: Add crictlEfraim Flashner
2019-11-11gn: helm: Update to 2.16.0.Efraim Flashner
2019-11-10gn: mailman: Use upstream python-zope-eventEfraim Flashner
2019-11-10gn: Add python-jupyter-repo2dockerEfraim Flashner
2019-11-10gn: Add minikube.Efraim Flashner
2019-11-10gn: Update dependencies for rust-qtlreaper.Efraim Flashner
* gn/packages/crates.io.scm (rust-arrayvec-0.4): Update to 0.4.12. (rust-either-1.5): Update to 1.5.3. (rust-unicode-segmentation-1.6): New variable. * gn/packages/genenetwork.scm (rust-qtlreaper)[inputs]: Remove rust-unicode-segmentation-1.3, add rust-unicode-segmentation-1.6.
2019-11-06gn: Add traefikEfraim Flashner
2019-11-06gn: Add jupyterhub, the-littlest-jupyterhubEfraim Flashner
2019-11-06gn: Add helm.Efraim Flashner
2019-11-06gn: Add kubernetes.Efraim Flashner
2019-11-05gn: Fix lint issues in (gn packages mailman).Efraim Flashner
2019-11-03gn: Add gitea backup timerEfraim Flashner
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