aboutsummaryrefslogtreecommitdiff
path: root/gn
AgeCommit message (Expand)Author
2016-03-11Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-11Added test suite to pindel package.Roel Janssen
2016-03-11Small compile fixes for pindelpjotrp
2016-03-10Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-10Add multiple packages....- tabixpp - smithwaterman - multichoose - fsom - filevercmp - fastahack - bash-tap - vcflib Roel Janssen
2016-03-09spacespjotrp
2016-03-09fixPjotr Prins
2016-03-09Small fixedPjotr Prins
2016-03-09Merge branch 'master' of github.com:roelj/guix-bioinformatics into roeljPjotr Prins
2016-03-09Added pindel without test suite.Roel Janssen
2016-03-09Added submodules to run tests, and provided an override to run the tests.Roel Janssen
2016-03-08Merge branch 'master' of github.com:Brainiarc7/guix-bioinformatics into dennisPjotr Prins
2016-03-08Change license handling ...Still fails to build. Obscure ruby error.Dennis E. Mungai
2016-03-08Package now builds on GNU Guix...All done.Dennis E. Mungai
2016-03-08Wrong hash, correct on build...Tertiary OpenCL headers package.Dennis E. Mungai
2016-03-08Notes: Requires OpenCL headers to build....Port Khronos OpenCL headers to guix before building this package.Dennis E. Mungai
2016-03-08Add Khronos OpenCL ICD...Ported to guix.Dennis E. Mungai
2016-03-08Add ocl-icd package to GNU Guix...Added the Opensource reference OpenCL ICD, a dependency for Arrayfire and other OpenCL runtimes on GNU GuixDennis E. Mungai
2016-03-07Added transitional package llvm-3.7.1...Needed by POCL, version bumped.Dennis E. Mungai
2016-03-07Add clang-runtime as a dependency.Dennis E. Mungai
2016-03-07python2-pil was missing from gn2pjotrp
2016-03-05Guix paths to the toolspjotrp
2016-03-04Updated hash values....Changed with new commits to Arrayfire.Dennis E. Mungai
2016-03-04Bumped up to v.3.3.1-hotfix. ...Fixes a bunch of build bugsDennis E. Mungai
2016-03-04Add afnumpy to guix...afnumpy is a GPGPU - accelerated drop-in to numpyDennis E. Mungai
2016-03-04python-mysqlclient: propagate the shared libpjotrp
2016-03-04Merge branch 'master' of github.com:genenetwork/guix-bioinformaticspjotrp
2016-03-04GN2 is now a self contained package (except for the database)pjotrp
2016-03-04Merge pull request #8 from roelj/master...Add FREEC.Pjotr Prins
2016-03-03Fix for home-page, synopsis and description of vcflib.Roel Janssen
2016-03-03License fix for Freebayes.Roel Janssen
2016-03-03Added genenetwork2-files-smallpjotrp
2016-03-03Switch to cmake build system.Dennis E. Mungai
2016-03-02Add and port the Portable OpenCL package to guix...This is the POCL port to guix. It provides an open source , vendor neutral OpenCL ICD (Installable Client Driver), suitable for testing as a reference OpenCL platform. Regards, Brainiarc7.Dennis E. Mungai
2016-03-02Add vcflib.Roel Janssen
2016-03-02Add FREEC.Roel Janssen
2016-03-01Use the original Makefile to statically compile lz4.Roel Janssen
2016-03-01Changed Sambamba source.Roel Janssen
2016-03-01Add freebayes.Roel Janssen
2016-03-01Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-01Added glfw guix package...This is an open source, multi-platform library for creating windows with OpenGL contexts and receiving inputs and events. A common pipeline for applications such as Arrayfire that require access to OpenGL-OpenCL interops on multiple platforms.Dennis E. Mungai
2016-03-01gn2 updatedpjotrp
2016-03-01gn2 updatedpjotrp
2016-03-01hyphy: simplified inputs, changed licensepjotrp
2016-03-01Merge pull request #6 from Brainiarc7/master...Update this fork with Pjotr's upstream code.Pjotr Prins
2016-02-29Added hyphy.scm...Requires a patch or substitute* clause to get working.Dennis E. Mungai
2016-02-29Update openfyba.scmDennis E. Mungai
2016-02-29Renamed as requested...Package name is in lower case.Dennis E. Mungai
2016-02-29OpenFYBA ready for production....The package can now be pushed upstream to GNU guix. It builds successfully.Dennis E. Mungai
2016-02-29Reverted htslib for Sambamba to the repository's version.Roel Janssen