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2021-01-12gn: javascript: Add xtermjs and associated css styling...* gn/packages/javascript.scm: (javascript-xterm): New package. (javascript-xterm-style): New package. Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com> Alexanderkabui
2021-01-12gn: services: gn1-httpd-config: Use MemorySession for sessions...See: <http://modpython.org/live/mod_python-3.3.1/doc-html/pyapi-sess-classes.html> BonfaceKilz
2021-01-12gn: genenetwork1: Create "useralt" and replace "user" with it...* gn/packages/genenetwork.scm (genenetwork1): [arguments]: In 'changes-for-deployed-service, copy "web/webqtl/user" to "web/webqtl/useralt" and replace how "user" is imported in "web/webqtl/main.py" BonfaceKilz
2021-01-12gn: services: gn1-httpd-config: Replace SetHandler with AddHandler...* gn/services/gn1-httpd-config.scm (GN1-httpd-config): Use "AddHandler mod_python .py". This allows all python modules and submodules to be loaded by modpython. BonfaceKilz
2021-01-12gn: services: gn1-httpd-config: Change document root to "/web/"BonfaceKilz
2021-01-12gn: services: gn1-httpd-config: Make apache display static content...Static content here is: images, javascript and CSS. * gn/services/gn1-httpd-config.scm (GNI-httpd-config): Add extra apache directive for showing images, javascript, and CSS. BonfaceKilz
2021-01-09ruby-redis: newpjotrp
2021-01-09gemma: revert to latestpjotrp
2021-01-09fixpjotrp
2020-12-21gn: genenetwork1 service: Factor out httpd config.Efraim Flashner
2020-12-17gn: lizardfs: Update packageEfraim Flashner
2020-12-17gn: python-twint: Patch Token class in order to get refreshTokens...* gn/packages/twint.scm [patches]: Add python-twint-token.patch. * python-twint-token.patch: New file. BonfaceKilz
2020-12-16gn: javascript: Update javascript-underscore to 1.12.0BonfaceKilz
2020-12-16Updated gemmapjotrp
2020-12-15octopus: Add lizardfs serviceEfraim Flashner
2020-12-15Update gemma-gn2pjotrp
2020-12-15Updated gemma package for GN2pjotrp
2020-12-15Try htslib with codecspjotrp
2020-12-15Remove stuff that is in trunkpjotrp
2020-12-15gn: rust-handlegraph-0.3, rust-ndarray-0.12 upstreamedEfraim Flashner
2020-12-15gn: javascript: Use correct datatable-scroller library...* gn/packages/javascript.scm (javascript-datatables-scroller): Update to 2.0.3. [propagated-inputs]: Add javascript-datatables-scroller-style. [synopsis]: Update it. (javascript-datatables-scroller-style): New package. Signed-off-by: BonfaceKilz <bonfacemunyoki@gmail.com> Alexanderkabui
2020-12-07gn: modularize slurm serviceEfraim Flashner
2020-12-06gn: python3-genenetwork2: Generate svg graph from python3-package...* gn/packages/genenetwork.scm (python3-genenetwork2): [native-inputs]: Add graphviz. [arguments]{generate-dag-svg-file}: New phase. BonfaceKilz
2020-12-06gn: python3-genenetwork2: Remove unnecessary begin form...* gn/packages/genenetwork.scm (python3-genenetwork2): [arguments] {generate-graph}: Remove begin form. BonfaceKilz
2020-12-06gn: fix module importsEfraim Flashner
2020-12-04gn: python3-genenetwork2: Generate graph from python3-package...* gn/packages/genenetwork.scm: Add new #:use-modules: (guix graph) (guix scripts graph) (guix store) (python3-genenetwork2)[arguments]{generate-graph}: New phase after install that uses d3js to generate a new graph which uses d3js as a backend. BonfaceKilz
2020-12-04gn: python3-genenetwork2: Add package link in generated deps file...* gn/packages/genenetwork.scm (python3-genenetwork2): [arguments]{generate-dependency-file}: Add link to "genenetwork.scm" file. BonfaceKilz
2020-12-03octopus: update slurm servicesEfraim Flashner
2020-12-02gn: python3-genenetwork2: Generate static dependencies file...* gn/packages/genenetwork.scm (python3-genenetwork2): [arguments]{generate-dependency-file}: Add new phase after "install" that generates a "DEPENDENCY.md" file which will be displayed in the gn2 web interface. BonfaceKilz
2020-12-01octopus: add slurm servicesEfraim Flashner
2020-11-29gn: remove unecessary importEfraim Flashner
2020-11-29gn: python-xlsxwriter available upstream.Efraim Flashner
2020-11-28gemma-gn2: updated to latestpjotrp
2020-11-26octopus: Add munge service, initial octopus OS configEfraim Flashner
2020-11-25gn: Add lizardfsEfraim Flashner
2020-11-23upstream cwltools and dependant packagesEfraim Flashner
2020-11-21Updated CWLpjotrp
2020-11-21cwltools: updatedPjotr Prins
2020-11-20gn: genenetwork2: Remove vim from propagated inputs...* gn/packages/genenetwork.scm (genenetwork2): [propagated-inputs]: Remove vim. Right now, building vim fails, thereby causing python3-genenetwork2 to fail. BonfaceKilz
2020-11-20gn: python3-genenetwork: Replace python-mistune with python-markdownBonfaceKilz
2020-11-19gn: python3-genenetwork2: Comment out python-flask-socketio...* gn/packages/genenetwork.scm (python3-genenetwork2): [propagated-inputs]: Comment out python-flask-socketio. Causes build on Penguin2 to fail. BonfaceKilz
2020-11-17gn: python-flask-socketio: New inputs...* gn/packages/python.scm (python-flask-socketio): Add support for eventlet. [propagated-inputs]: Add python-dnspython, python-eventlet, python-monotonic. BonfaceKilz
2020-11-17gn: python3-genenetwork2: Add python-flask-socketio...* gn/packages/genenetwork.scm (python3-genenetwork2): [propagated-inputs]: Add python-flask-socketio. BonfaceKilz
2020-11-16gn: python: Add python-flask-socketioBonfaceKilz
2020-11-16gn: python: Add python-socketioBonfaceKilz
2020-11-16gn: python: Add python-engioneioBonfaceKilz
2020-11-16gn: python3-genenetwork2: Add javascript-ckeditor...* gn/packages/genenetwork.scm (python3-genenetwork2): [propagated-inputs]: Add javascript-ckeditor. BonfaceKilz
2020-11-14gn: python3-genenetwork2: Add python-rdflibBonfaceKilz
2020-11-12gn: python24-parallel: Fix package description.Efraim Flashner
2020-11-12python24-pp: rename to python24-parallelEfraim Flashner
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