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2021-03-08gn: python-ipfshttpclient: Make VERSON_MAXIMUM check 0.7.1BonfaceKilz
2021-03-08gn: python: Add python-ipfshttpclientBonfaceKilz
2021-03-08gn: python: Add python-multiaddr v0.0.9BonfaceKilz
2021-03-08gn: python: Add python-varint v1.0.2BonfaceKilz
2021-03-07gn: bnw: Update to newer revision....* Use bundled javascript libraries, there seems to be some mismatch between upstream and out copies. * Wrap shell scripts with coreutils. Efraim Flashner
2021-03-04gn: Update vg to 1.30.0.Efraim Flashner
2021-03-04gn: add missing javascript change with BNW updateEfraim Flashner
2021-03-04gn: Remove two upstreamed packages.Efraim Flashner
2021-03-04gn: Update bnw to latest version....Update bnw and the service Efraim Flashner
2021-02-19mod_python session path fixPjotr Prins
2021-02-15gn1: portPjotr Prins
2021-02-15gn1: defaultPjotr Prins
2021-02-15gn1: parametrizeGN1 user
2021-02-05gn1: parametrize source so I can use a local dirGN1 user
2021-02-05gn1: make run in a containerroot
2021-02-05Move packages to genetwork1 propagated inputs...* gn/services/genenetwork.scm: Move some package defs to ... * gn/packages/genenetwork.scm [propagated-inputs]: ... here. BonfaceKilz
2021-02-05packages: python24: Replace with ipfs file link...* gn/packages/python24.scm: (GN1-thirdparty-sources): Use ipfs link BonfaceKilz
2021-02-03gn: javascript: Add javascript-font-awesome...* gn/packages/javascript.scm: (javascript-font-awesome): New package. * gn/packages/javascript.scm: (genenetwork2) [propagated-inputs]: Add javascript-font-awesome. Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com> Alexander Kabui
2021-02-03octopus config changesEfraim Flashner
2021-01-31gn: javascript: Replace javascript-zxcvbn-async with javascript-zxcvbn...Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com> Alexander Kabui
2021-01-24gn: bio-vcf upstreamedEfraim Flashner
2021-01-17gn: update bio-rubyEfraim Flashner
2021-01-13gn: update ratspub to 0.4.5.Efraim Flashner
2021-01-12gn: javascript: Add xtermjs and associated css styling...* gn/packages/javascript.scm: (javascript-xterm): New package. (javascript-xterm-style): New package. Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com> Alexanderkabui
2021-01-12gn: services: gn1-httpd-config: Use MemorySession for sessions...See: <http://modpython.org/live/mod_python-3.3.1/doc-html/pyapi-sess-classes.html> BonfaceKilz
2021-01-12gn: genenetwork1: Create "useralt" and replace "user" with it...* gn/packages/genenetwork.scm (genenetwork1): [arguments]: In 'changes-for-deployed-service, copy "web/webqtl/user" to "web/webqtl/useralt" and replace how "user" is imported in "web/webqtl/main.py" BonfaceKilz
2021-01-12gn: services: gn1-httpd-config: Replace SetHandler with AddHandler...* gn/services/gn1-httpd-config.scm (GN1-httpd-config): Use "AddHandler mod_python .py". This allows all python modules and submodules to be loaded by modpython. BonfaceKilz
2021-01-12gn: services: gn1-httpd-config: Change document root to "/web/"BonfaceKilz
2021-01-12gn: services: gn1-httpd-config: Make apache display static content...Static content here is: images, javascript and CSS. * gn/services/gn1-httpd-config.scm (GNI-httpd-config): Add extra apache directive for showing images, javascript, and CSS. BonfaceKilz
2021-01-09ruby-redis: newpjotrp
2021-01-09gemma: revert to latestpjotrp
2021-01-09fixpjotrp
2020-12-21gn: genenetwork1 service: Factor out httpd config.Efraim Flashner
2020-12-17gn: lizardfs: Update packageEfraim Flashner
2020-12-17gn: python-twint: Patch Token class in order to get refreshTokens...* gn/packages/twint.scm [patches]: Add python-twint-token.patch. * python-twint-token.patch: New file. BonfaceKilz
2020-12-16gn: javascript: Update javascript-underscore to 1.12.0BonfaceKilz
2020-12-16Updated gemmapjotrp
2020-12-15octopus: Add lizardfs serviceEfraim Flashner
2020-12-15Update gemma-gn2pjotrp
2020-12-15Updated gemma package for GN2pjotrp
2020-12-15Try htslib with codecspjotrp
2020-12-15Remove stuff that is in trunkpjotrp
2020-12-15gn: rust-handlegraph-0.3, rust-ndarray-0.12 upstreamedEfraim Flashner
2020-12-15gn: javascript: Use correct datatable-scroller library...* gn/packages/javascript.scm (javascript-datatables-scroller): Update to 2.0.3. [propagated-inputs]: Add javascript-datatables-scroller-style. [synopsis]: Update it. (javascript-datatables-scroller-style): New package. Signed-off-by: BonfaceKilz <bonfacemunyoki@gmail.com> Alexanderkabui
2020-12-07gn: modularize slurm serviceEfraim Flashner
2020-12-06gn: python3-genenetwork2: Generate svg graph from python3-package...* gn/packages/genenetwork.scm (python3-genenetwork2): [native-inputs]: Add graphviz. [arguments]{generate-dag-svg-file}: New phase. BonfaceKilz
2020-12-06gn: python3-genenetwork2: Remove unnecessary begin form...* gn/packages/genenetwork.scm (python3-genenetwork2): [arguments] {generate-graph}: Remove begin form. BonfaceKilz
2020-12-06gn: fix module importsEfraim Flashner
2020-12-04gn: python3-genenetwork2: Generate graph from python3-package...* gn/packages/genenetwork.scm: Add new #:use-modules: (guix graph) (guix scripts graph) (guix store) (python3-genenetwork2)[arguments]{generate-graph}: New phase after install that uses d3js to generate a new graph which uses d3js as a backend. BonfaceKilz
2020-12-04gn: python3-genenetwork2: Add package link in generated deps file...* gn/packages/genenetwork.scm (python3-genenetwork2): [arguments]{generate-dependency-file}: Add link to "genenetwork.scm" file. BonfaceKilz