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2016-03-19Arrayfire now builds on GNU Guix...Mission accomplished. Praise the sun!!!Dennis E. Mungai
2016-03-19Add more native deps ...See the cmake configuration options used.Dennis E. Mungai
2016-03-19Use the system's Boost Compute library as an input ...See the CMake configuration string for details. Investigating a latent build failure.Dennis E. Mungai
2016-03-19Broken build, still cannot detect Boost.Compute...To be fixed. To build, you need to disable the OpenCL back-end.Dennis E. Mungai
2016-03-19Package successfully ported to GNU Guix...Praise the sun !Dennis E. Mungai
2016-03-19Fixes. Package still fails to build...Investigate and patch later.Dennis E. Mungai
2016-03-19ported gtest to guix...Cleanup pending. Package builds. Need to trim inputs.Dennis E. Mungai
2016-03-18fix conflictpjotrp
2016-03-18Merge branch 'master' into dennispjotrp
2016-03-18Meregpjotrp
2016-03-18Added clBLAS...Build fails due to googletest's missing target "install". Investigating.Dennis E. Mungai
2016-03-18Ported clFFT to GNU Guix...Package builds successfully.Dennis E. Mungai
2016-03-18Package now builds on GNU Guix...Caveats: Only the CPU back-end builds at the moment. Needed inputs for OpenCL backends: clFFT and clBLAS.Dennis E. Mungai
2016-03-18Use proper formatting for License lists...Also updates the Arrayfire fetch URL to the one hosted by Arrayfire as Github's generated tarballs do not package the required submodules.Dennis E. Mungai
2016-03-18WIP: Add varscan....The JAR construction cannot contain a wild-card. That has to be fixed. Roel Janssen
2016-03-18Bump version to v3.3.3...Also change licensing schema with #prefix (es). Solves namespace problems. Also added wget as an input (As it's needed as a fallback incase checksums for Boost are invalid).Dennis E. Mungai
2016-03-16Add delly.Roel Janssen
2016-03-16Add contra.Roel Janssen
2016-03-15Added Java packages, working, WIP and ON HOLD.Roel Janssen
2016-03-12Add a few more deps (needed glut)...Intel's Beignet package still can't build on guix, complains about libclang.Dennis E. Mungai
2016-03-12Add Intel Beignet to guix...This is Intel's Beignet, Intel's OpenCL platform for their GPUs and CPUs.Dennis E. Mungai
2016-03-12WIP...Work in progress. Investigate,Dennis E. Mungai
2016-03-11Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-11Added test suite to pindel package.Roel Janssen
2016-03-11Small compile fixes for pindelpjotrp
2016-03-10Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-10Add multiple packages....- tabixpp - smithwaterman - multichoose - fsom - filevercmp - fastahack - bash-tap - vcflib Roel Janssen
2016-03-09spacespjotrp
2016-03-09fixPjotr Prins
2016-03-09Small fixedPjotr Prins
2016-03-09Merge branch 'master' of github.com:roelj/guix-bioinformatics into roeljPjotr Prins
2016-03-09Added pindel without test suite.Roel Janssen
2016-03-09Added submodules to run tests, and provided an override to run the tests.Roel Janssen
2016-03-08pocl updated with all dependencies....Have fun.Dennis E. Mungai
2016-03-08Merge branch 'master' of github.com:Brainiarc7/guix-bioinformatics into dennisPjotr Prins
2016-03-08Change license handling ...Still fails to build. Obscure ruby error.Dennis E. Mungai
2016-03-08Package now builds on GNU Guix...All done.Dennis E. Mungai
2016-03-08Wrong hash, correct on build...Tertiary OpenCL headers package.Dennis E. Mungai
2016-03-08Notes: Requires OpenCL headers to build....Port Khronos OpenCL headers to guix before building this package.Dennis E. Mungai
2016-03-08Add Khronos OpenCL ICD...Ported to guix.Dennis E. Mungai
2016-03-08Add ocl-icd package to GNU Guix...Added the Opensource reference OpenCL ICD, a dependency for Arrayfire and other OpenCL runtimes on GNU GuixDennis E. Mungai
2016-03-07Added transitional package llvm-3.7.1...Needed by POCL, version bumped.Dennis E. Mungai
2016-03-07Add clang-runtime as a dependency.Dennis E. Mungai
2016-03-07python2-pil was missing from gn2pjotrp
2016-03-05Guix paths to the toolspjotrp
2016-03-04Updated hash values....Changed with new commits to Arrayfire.Dennis E. Mungai
2016-03-04Bumped up to v.3.3.1-hotfix. ...Fixes a bunch of build bugsDennis E. Mungai
2016-03-04Add afnumpy to guix...afnumpy is a GPGPU - accelerated drop-in to numpyDennis E. Mungai
2016-03-04python-mysqlclient: propagate the shared libpjotrp
2016-03-04Merge branch 'master' of github.com:genenetwork/guix-bioinformaticspjotrp