Age | Commit message (Collapse) | Author |
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todo:
fix tests: https://github.com/NixOS/nixpkgs/blob/nixos-21.11/pkgs/development/python-modules/supervisor/default.nix#L16
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* gn/packages/static.scm (wfmash-static)[name]: Set to wfmash-static.
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* gn/packages/static.scm: Import (gnu packages bioinformatics), (gnu
packages compression), (gnu packages cpp), (gnu packages
jemalloc), (gnu packages maths), (guix gexp) and (guix utils).
(htslib-minimal, wfmash-static): New variables.
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* gn/packages/riscv.scm: Do not import (gnu packages base), (guix
packages) and (guix build-system gnu).
(hello-static): Move to gn/packages/static.scm.
* gn/packages/static.scm: New file.
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riscv-pk has been upstreamed.
* gn/packages/virtualization.scm: Do not import (guix build-system
gnu) and (gnu packages cross-base).
(riscv-pk): Delete variable.
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wfmash has been upstreamed.
* gn/packages/riscv.scm (wfmash): Delete variable.
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* gn/packages/riscv.scm (hello-static)[name]: Set to hello-static.
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* gn/packages/virtualization.scm (riscv-pk)[arguments]: Keep symbols
fromhost and tohost while stripping.
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* gn/packages/riscv.scm: Import (guix build-system gnu).
(hello): Use static-package.
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* gn/packages/gemini.scm (tissue): Update to 0.1.0-0.b154339.
[arguments]: Import target-guile-effective-version from (guix build
guile-build-system). Wrap executable to set GUILE_LOAD_PATH and
GUILE_LOAD_COMPILED_PATH.
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* gn/packages/gemini.scm (skribilo-with-gemtext-reader): Update to
0.9.5-0.183eb12.
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MERGED https://issues.guix.gnu.org/54503
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Building tissue was failing because of this package.
* gn/packages/gemini.scm : Use commit
"fb51be990a4bb8fb76373b519edfcf11390dcca1".
[package]: Use above commit. Update hash.
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https://issues.guix.gnu.org/54503
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* gn/packages/genenetwork.scm (genenetwork3): Update to
0.1.0-2.16367da.
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These packages are required in the propagated-inputs so that they can be run
locally.
* gn/packages/genenetwork.scm (genenetwork)[native-inputs]: Move pytest and
pytest to...
[propagated-inputs]: here.
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* gn/packages/genenetwork.scm (genenetwork2) [native-inputs]: Add pytest and
pytest-mock
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This patch adds a version of wfmash that builds and runs successfully
on RISC-V.
* gn/packages/riscv.scm: New file.
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* gn/packages/gemini.scm (tissue): Update to 0.1.0-0.17d101b.
[arguments]: Substitute absolute path to git.
[inputs]: Add git-minimal.
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* gn/packages/gemini.scm (skribilo-with-gemtext-reader): New variable.
(tissue): Update to 0.1.0-0.e62965d.
[arguments]: Add "GUILE_AUTO_COMPILE=0" to #:make-flags.
[propagated-inputs]: Add skribilo-with-gemtext-reader.
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*
gn/services/databases.scm (<virtuoso-configuration>)[state-directory]:
New field.
* gn/services/databases.scm (virtuoso-shepherd-service): Use
state-directory.
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* gn/services/databases.scm (<virtuoso-configuration>)[server-ip,
server-port]: New fields.
* gn/services/databases.scm (virtuoso-shepherd-service): Use server-ip
and server-port.
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*
gn/services/databases.scm (<virtuoso-configuration>)[http-server-ip]:
New field.
* gn/services/databases.scm (virtuoso-shepherd-service): Use
http-server-ip.
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define-configuration does too much magic.
* gn/services/databases.scm (<virtuoso-configuration>): Redefine
using (guix records).
Export virtuoso-configuration?.
(virtuoso-shepherd-service): Represent a disabled port with #f.
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add more to description field
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* gn/packages/python.scm: New package.
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* gn/packages/genenetwork.scm (genenetwork3)[native-inputs]: Add
python-pytest-mock.
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* gn/packages/genenetwork.scm (genenetwork2): Update to
3.11-2.17652b1.
[arguments]: Restore the default install phase.
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Guix now prefers inputs as a plain list instead of an association
list. Modernize.
* gn/packages/genenetwork.scm (genenetwork3)[propagated-inputs]: Use
plain list instead of association list.
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coreutils and diffutils are implicit inputs of the
python-build-system. They don't have to be included explicitly.
* gn/packages/genenetwork.scm (genenetwork3)[propagated-inputs]:
Remove coreutils and diffutils.
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* gn/packages/genenetwork.scm (genenetwork3): Update to
0.1.0-2.83a7aa7.
[arguments]: Enable tests.
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