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4 daysgn-libs: Add required, build-specific dependencies.Frederick Muriuki Muriithi
5 dayspython: python-flask-debugtoobar: Update to 0.16.0Munyoki Kilyungi
* gn/packages/python.scm (python-flask-debugtoolbar): [source]: Use github URL instead of PyPi. [build-system]: use pyproject-build-system. [native-inputs]: Add python-pytest. [propagated-inputs]: Add python-flit-core and python-flask-sqlalchemy.
5 daysUpgrade guix channel to c84ba4f.Arun Isaac
* .guix-channel: Upgrade guix channel to c84ba4f. * gn/packages/crates-io.scm: Import (gnu packages crates-check) for rust-criterion. * gn/packages/crates-io.scm, gn/packages/bioinformatics.scm: Import (gnu packages crates-compression) for rust-flate2.
8 daysGenenetwork2: Upgrade to commit 96433ed.Munyoki Kilyungi
8 daysGenenetwork3: Upgrade to c01aa26.Munyoki Kilyungi
10 daysGenenetwork2: Upgrade to commit 2a3df8c.Frederick Muriuki Muriithi
10 daysGenenetwork3: Upgrade to commit 99fd507.Frederick Muriuki Muriithi
10 daysgn-uploader: Upgrade to commit 64c404e.Frederick Muriuki Muriithi
10 daysgn-auth: upgrade to commit 073395f.Frederick Muriuki Muriithi
10 daysgn-guile: Update gn-guile.Munyoki Kilyungi
* gn/packages/guile.scm: Import guile-lmdb and guile-lib. (gn-guile): Update to 169d26710c978484f8e9464a95be6eaa47fa704e. Also, make lmdb-publishdata-export script executable. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysgn: genenetwork2: Add javascript-xterm, javascript-xterm-style.Alexander_Kabui
* gn/packages/genenetwork.scm (genenetwork2) [propagated-inputs]: Add javascript-xterm, javascript-xterm-style. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysgn: javascript: Update javascript-xterm, javascript-xterm-style.Alexander_Kabui
* gn/packages/javascript.scm (javascript-xterm): Update to 5.3.0 * gn/packages/javascript.scm (javascript-xterm-style): Update to 5.3.0 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysgn: pggb: Use wfmash-0.14 instead of the latest wfmash.Arun Isaac
* gn/packages/bioinformatics.scm (pggb)[inputs]: Replace wfmash with wfmash-0.14.
12 daysgn: Add wfmash-0.14.Arun Isaac
* gn/packages/bioinformatics.scm (wfmash-0.14): New variable.
2025-02-11gn: pggb: Update to 0.7.2.Arun Isaac
* gn/packages/bioinformatics.scm (pggb): Update to 0.7.2.
2025-02-11gn: pggb: Remove unused dependencies.Arun Isaac
These dependencies are referred to in the documentation and put into the Docker image, but are not actually used by pggb. * gn/packages/bioinformatics.scm (pggb)[inputs]: Remove fastix, mummer, pafplot and vcflib.
2025-02-11gn: odgi: Disable tests.Arun Isaac
* gn/packages/bioinformatics.scm (odgi): Disable tests.
2025-02-10gn-guile: Make dependencies available in profile after buildFrederick Muriuki Muriithi
2025-02-10genenetwork2: Upgrade to commit 4f9a46e.Frederick Muriuki Muriithi
2025-02-04gn-uploader: Upgrade to commit d8b58c3.Frederick Muriuki Muriithi
2025-02-03gn-auth: upgrade to commit 8e64f7f.Frederick Muriuki Muriithi
2025-02-03gn-auth: upgrade to commit eec8128.Frederick Muriuki Muriithi
2025-01-29gn-uploader: upgrade to commit 8ab53c9.Frederick Muriuki Muriithi
2025-01-29gn-uploader: Upgrade to commit 848bd53.Frederick Muriuki Muriithi
2025-01-29gn-uploader: Add javascript-datatables as a dependency.Frederick Muriuki Muriithi
2025-01-28gn-uploader: Bump up commit to b7d4263.Frederick Muriuki Muriithi
2025-01-28gn-uploader: Upgrade to version 0.1.0 and commit cb57ff0e.Frederick Muriuki Muriithi
We are gaining some stability at this point, so we raise the minor version. Also mark the commit for the demo.
2025-01-26Genenetwork3: upgrade to commit 0d902ec.Frederick Muriuki Muriithi
2025-01-25Genenetwork2: Upgrade to commit 314c6d5.Frederick Muriuki Muriithi
2025-01-25gnu: r-rrbgen: Fix name typo.Arun Isaac
* gn/packages/bioinformatics.scm (r-rrbgen)[name]: Fix typo.
2025-01-22genenetwork2: Upgrade to commit 0db8dca.Frederick Muriuki Muriithi
Fixes bug with the registration page.
2025-01-21gn-libs: upgrade to commit 72a95f8.Frederick Muriuki Muriithi
2025-01-20gn-auth: Upgrade to e345a04.Frederick Muriuki Muriithi
2025-01-20Genenetwork3: Upgrade to commit 5d2aebb.Frederick Muriuki Muriithi
2025-01-20Genenetwork2: Upgrade to commit 6d4d48e.Frederick Muriuki Muriithi
2025-01-10genenetwork2: upgrade to commit 798d3c6.Frederick Muriuki Muriithi
2025-01-10gn-auth: upgrade to commit 877a7a3.Frederick Muriuki Muriithi
2025-01-08genenetwork2: upgrade to commit c450890.Frederick Muriuki Muriithi
2025-01-08genenetwork2: upgrade to commit 854639b.Frederick Muriuki Muriithi
2025-01-08genenetwork2: upgrade to commit dc606f3.Frederick Muriuki Muriithi
2025-01-08genenetwork2: upgrade to commit 236a488.Frederick Muriuki Muriithi
2025-01-07genenetwork2: upgrade to commit 9bdc8ca.Frederick Muriuki Muriithi
2025-01-07genenetwork2: update to commit 7e6bfe4.Frederick Muriuki Muriithi
2025-01-07genenetwork2: upgrade to commit 8bf483a.Frederick Muriuki Muriithi
2025-01-07genenetwork2: Upgrade to commit 125c436.Frederick Muriuki Muriithi
2025-01-07genenetwork2: Upgrade to commit 93dd7f7Frederick Muriuki Muriithi
This is to help troubleshoot the refresh token process and identify causes of failures.
2025-01-07genenetwork3: Add coreutils-minimal to genenetwork3.Munyoki Kilyungi
* gn/packages/genenetwork.scm (genenetwork3)[propagated-inputs]: Add coreutils-minimal. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-01-06genenetwork2: upgrade to commit 55da580.Frederick Muriuki Muriithi
2025-01-06gn-guile: Patch "git -C" with correct git path.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-01-06gn-guile: Add missing quotes around patche "git" command.Munyoki Kilyungi
* gn/packages/guile.scm: (gn-guile): Add missing quotes around "git" command. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
generated by cgit v1.2.3 (git 2.47.1) at 2025-03-01 20:15:31 +0000