| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-09-10 | Revert "(gn packages gemma-wrapper): Add new dependencies." | Frederick Muriuki Muriithi | |
| This reverts commit ab2ae88f2698cde22cae05c432f0f1ae0db7b070. At this point, running GEMMA will fail because it attempts to extract files into the /tmp directory, which leads to permission issues when there is an attempt to change the permission bits of /tmp. | |||
| 2024-09-10 | (gn packages gemma-wrapper): Add new dependencies. | Frederick Muriuki Muriithi | |
| 2024-09-10 | genenetwork2: Update commit and hash | Frederick Muriuki Muriithi | |
| 2024-08-26 | gn: mouse-longevity: Remove breaking line until resolved. | jgart | |
| 2024-08-21 | gn: mouse-longevity: Update to 8a7fdd3. | jgart | |
| 2024-08-16 | gn: mouse-longevity: Update to d798fc1 | jgart | |
| 2024-08-15 | gn: mouse-longevity: Update upstream url. | jgart | |
| 2024-08-15 | gn: genenetwork2: Update genenetwork2 with new markdown client deps. | Alexander_Kabui | |
| * gn/packages/genenetwork.scm: (genenetwork2) [propagated-inputs]: Add javascript-ace, javascript-diff, javascript-diff2html, javascript-diff2html-ui javascript-highlight, javascript-highlight-ui, javascript-marked, javascript-marked-highlight. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-15 | gn: javascript: Add javascript-highlight-ui. | Alexander_Kabui | |
| * gn/packages/javascript.scm (javascript-highight-ui): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-15 | gn: javascript: Add javascript-highlight. | Alexander_Kabui | |
| * gn/packages/javascript.scm (javascript-highlight): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-15 | gn: javascript: Add javascript-diff. | Alexander_Kabui | |
| * gn/packages/javascript.scm (javascript-diff): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-15 | gn: javascript: Add javascript-diff2html-ui. | Alexander_Kabui | |
| * gn/packages/javascript.scm (javascript-diff2html-ui): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-15 | gn: javascript: Add javascript-diff2html. | Alexander_Kabui | |
| * gn/packages/javascript.scm (javascript-diff2html): New package. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-15 | gn: javascript: Update javascript-ace. | Alexander_Kabui | |
| * gn/packages/javascript.scm: (javascript-ace): Update License. Apply guix style. Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-13 | gn-auth: Update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-08-08 | gn-auth: update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-08-07 | gn-auth: Update commit and hash | Frederick Muriuki Muriithi | |
| Update the hash to pull in fixes for the following ops issues: * Installing of Jinja2 text-file templates for emails * Logging out unhandled exceptions as errors for easier debugging | |||
| 2024-08-07 | Production release | Frederick Muriuki Muriithi | |
| * GN2: 0998033d0a7ea26ed96b00a360a334bae6de8c55 * GN3: efa965c34db3662762dde8ecf376cce561d85453 * GN-AUTH: eb05221f57ec4b6a5537ac7661811ba33b4b0385 | |||
| 2024-07-31 | genecup: disable debug mode in flask application for production | jgart | |
| 2024-07-31 | mouse-longevity-app: extract the pubmed archive in the package | jgart | |
| 2024-07-31 | gn: Add mouse-longevity-app. | jgart | |
| * gn/packages/mouse-longevity.scm (mouse-longevity-app): New variable. | |||
| 2024-07-31 | genecup: update url | jgart | |
| 2024-07-25 | gn-uploader: (python-flask-session): New dependency. | Frederick Muriuki Muriithi | |
| 2024-07-25 | gn-uploader: (python-pymonad): New dependency. | Frederick Muriuki Muriithi | |
| 2024-07-25 | gn-uploader: (python-authlib): New dependency. | Frederick Muriuki Muriithi | |
| 2024-07-17 | gn-auth and GN2: Update commits and hashes. | Frederick Muriuki Muriithi | |
| 2024-07-15 | gn-auth: Add commit and revision to version. Update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-07-09 | GN3: update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-07-08 | gn-uploader: Add node-resumablejs as a dependency.update-gn3-for-production-container | Frederick Muriuki Muriithi | |
| 2024-07-08 | GN3: update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-07-06 | gn: gemma-wrapper: updated to 0.99.7 | pjotrp | |
| 2024-06-28 | genenetwork-full-system: Do synchronised release | Frederick Muriuki Muriithi | |
| Do a syncronised release of the genenetwork full system (it's not actually full, since gn-uploader is not yet part of the release, but it's good enough), with the following commits for the various parts: * GeneNetwork2: deb8d7241f1ca05865fababc2799ead9a684f8be * GeneNetwork3: 9f27bdc3ca41e09a090093bc36f48851fcc4fc42 * gn-auth: c8658a764cf30605c6e5a1361dcd09ddd422e371 | |||
| 2024-06-22 | rename ratspub.scm to genecup.scm | Shepherd on Tux02 | |
| 2024-06-21 | ratspub: remove definitions as they are replaced by genecup | Shepherd on Tux02 | |
| 2024-06-21 | genecup: fix typo | pjotrp | |
| 2024-06-20 | genecup: use keras without tests | Pjotr Prins | |
| 2024-06-14 | gn-uploader: (javascript-jquery): New dependency | Frederick Muriuki Muriithi | |
| JQuery is needed to get the bootstrap plugins working correctly. | |||
| 2024-06-13 | gn-uploader: javascript-bootstrap: New dependency | Frederick Muriuki Muriithi | |
| Bundle javascript-bootstrap with gn-uploader for styling. | |||
| 2024-06-12 | gn-uploader: Fix indentation. | Frederick Muriuki Muriithi | |
| 2024-05-09 | Fix path to error GIFs. | Munyoki Kilyungi | |
| Co-authored-by: Alexander <alexanderkabua@gmail.com> | |||
| 2024-04-19 | gn: Add hifiasm. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (hifiasm): New variable. | |||
| 2024-04-09 | gn: javascript: Fix failing javascript-xterm build. | Munyoki Kilyungi | |
| * gn/packages/javascript.scm (javascript-xterm): Update hash. [native-inputs]: Move this ... [propagated-inputs]: ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-05 | genenetwork2-stable: update hash | Pjotr Prins | |
| 2024-04-04 | Add recent javascript-d3 library | Pjotr Prins | |
| 2024-04-04 | javascript-d3panels: add variable and add to genenetwork2 | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: update hash | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: modify files that use R scripts | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: modify files using R scripts | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: copy other R scripts into destination | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: copy R script into destination | Pjotr Prins | |
 |
index : guix-bioinformatics | |
| Bioinformatics packages for GNU Guix |
| aboutsummaryrefslogtreecommitdiff |