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AgeCommit message (Collapse)Author
2016-03-01Changed Sambamba source.Roel Janssen
2016-03-01Add freebayes.Roel Janssen
2016-03-01Merge branch 'master' of https://github.com/genenetwork/guix-bioinformaticsRoel Janssen
2016-03-01Added glfw guix packageDennis E. Mungai
This is an open source, multi-platform library for creating windows with OpenGL contexts and receiving inputs and events. A common pipeline for applications such as Arrayfire that require access to OpenGL-OpenCL interops on multiple platforms.
2016-03-01gn2 updatedpjotrp
2016-03-01gn2 updatedpjotrp
2016-03-01hyphy: simplified inputs, changed licensepjotrp
2016-03-01Merge pull request #6 from Brainiarc7/masterPjotr Prins
Update this fork with Pjotr's upstream code.
2016-03-01Merge branch 'master' into dennispjotrp
2016-02-29Added hyphy.scmDennis E. Mungai
Requires a patch or substitute* clause to get working.
2016-02-29Update openfyba.scmDennis E. Mungai
2016-02-29Renamed as requestedDennis E. Mungai
Package name is in lower case.
2016-02-29OpenFYBA ready for production.Dennis E. Mungai
The package can now be pushed upstream to GNU guix. It builds successfully.
2016-02-29Reverted htslib for Sambamba to the repository's version.Roel Janssen
2016-02-29Removed obsolete reference to gccDennis E. Mungai
Not needed as an input, deprecated.
2016-02-29Show stopper: Cmake variables for glew search pathsDennis E. Mungai
A bug in Arrayfire. Submitted bug to Arrayfire, waiting for feedback. An interim patch is in the works and is being tested.
2016-02-29Fixed licensing stuff. Dennis E. Mungai
Package can now build. Tracking build dependencies.
2016-02-29OpenFYBA package: Cannot buildDennis E. Mungai
Needs to run autoreconf-ivf before the ./configure phase for the build to be successful. modify-phase statements needed.
2016-02-29Pending work: Fix Licensing stuff.Dennis E. Mungai
The build should run, though you'll run into bigger problems with licensing.
2016-02-28Update arrayfire.scmDennis E. Mungai
2016-02-28Lisp fixesDennis E. Mungai
2016-02-28Lisp specific fixes.Dennis E. Mungai
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgcna depspjotrp
2016-02-28r-wgca: git fetchpjotrp
2016-02-28rdmd has moved into guix properpjotrp
2016-02-28Restarted r-wgcnapjotrp
2016-02-26Fix ruby errorpjotrp
2016-02-25Applied Pjotr's patch. Dennis E. Mungai
Applied Pjotr's patch.
2016-02-25Added a WIP FreeBayes.Roel Janssen
2016-02-25Merge branch 'master' of github.com:genenetwork/guix-bioinformaticspjotrp
2016-02-25Fix python-piddlepjotrp
2016-02-25Small GN databasepjotrp
2016-02-25Add older version of python-pilpjotrp
2016-02-24A working version for Sambamba.Roel Janssen
2016-02-23Latest Sambamba. Link failure.Roel Janssen
2016-02-23Arrayfire fixespjotrp
2016-02-23Merge branch 'master' of github.com:Brainiarc7/guix-bioinformatics into dennispjotrp
2016-02-23Khronos OpenCL headers still needed.Dennis E. Mungai
The burn is strong on this one.
2016-02-23Added essential headers.Dennis E. Mungai
I commit to master directly. Needed: OpenCL headers. Challenge accepted.
2016-02-23Add fftw-openmpi as build dependencies. Dennis E. Mungai
Needed to build a running binary.
2016-02-23Add glfw as an input to arrayfire's build.Dennis E. Mungai
See the inputs section entry at ("glfw" ,glfw)
2016-02-23Declared package as a GNU Guix package.Dennis E. Mungai
See gnu packages definition at the beginning.
2016-02-23Fix the hash of glfw, based on sha256sumDennis E. Mungai
Bad hash, no build, mate.
2016-02-23Added Licensing information.Dennis E. Mungai
Licensing, do you speak it?
2016-02-23Added GFWL as a build dependencyDennis E. Mungai
*BOOM*
2016-02-23Notes: Missing libglw3 build dependencies.Dennis E. Mungai
To be fixed asap.
2016-02-23Breaks on linking in the final stages.Roel Janssen
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