| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2016-05-15 | Disable ant - it gives an error | Pjotr Prins | |
| 2016-05-11 | r-biocprocesscore has been updated. | Dennis E. Mungai | |
| This should fix the genenetwork2 build issue, as noted on IRC. | |||
| 2016-04-10 | remove remarks | pjotrp | |
| 2016-04-05 | Added bio-table and bio-vcf gems | pjotrp | |
| 2016-04-05 | Merge pull request #12 from roelj/master | Pjotr Prins | |
| gn: Add sparql-query. | |||
| 2016-04-04 | gn: Add sparql-query. | Roel Janssen | |
| * gn/packages/sparql-query.scm: New file. | |||
| 2016-03-30 | Small fixes and removed package now in main line | pjotrp | |
| 2016-03-30 | Merge branch 'master' of https://github.com/genenetwork/guix-bioinformatics | Roel Janssen | |
| 2016-03-24 | Elixir fix path | pjotrp | |
| 2016-03-24 | elixir: fix filename | pjotrp | |
| 2016-03-24 | Added elixir | pjotrp | |
| 2016-03-24 | Updated erlang by Leo | pjotrp | |
| 2016-03-23 | This runs with gn-stable | pjotrp | |
| 2016-03-23 | Merge | pjotrp | |
| 2016-03-23 | Databases | pjotrp | |
| 2016-03-23 | GN2 fix | pjotrp | |
| 2016-03-23 | GN2 fixstable | Pjotr Prins | |
| 2016-03-23 | Fixed hash | Pjotr Prins | |
| 2016-03-23 | Merge branch 'master' of https://github.com/genenetwork/guix-bioinformatics | Roel Janssen | |
| 2016-03-23 | gn: Add 4store. | Roel Janssen | |
| * gn/packages/4store.scm (4store): New variable. * 4store-fix-buildsystem.patch: New file. | |||
| 2016-03-22 | Fixed and added erlangdennis | Pjotr Prins | |
| 2016-03-20 | Add mongodb. | Roel Janssen | |
| This package was rejected upstream because it contains the sources of libraries that are also available as shared libraries. | |||
| 2016-03-19 | Merge branch 'master' of github.com:Brainiarc7/guix-bioinformatics into dennis | Pjotr Prins | |
| 2016-03-19 | Arrayfire now builds on GNU Guix | Dennis E. Mungai | |
| Mission accomplished. Praise the sun!!! | |||
| 2016-03-19 | Add more native deps | Dennis E. Mungai | |
| See the cmake configuration options used. | |||
| 2016-03-19 | Use the system's Boost Compute library as an input | Dennis E. Mungai | |
| See the CMake configuration string for details. Investigating a latent build failure. | |||
| 2016-03-19 | Broken build, still cannot detect Boost.Compute | Dennis E. Mungai | |
| To be fixed. To build, you need to disable the OpenCL back-end. | |||
| 2016-03-19 | Package successfully ported to GNU Guix | Dennis E. Mungai | |
| Praise the sun ! | |||
| 2016-03-19 | Fixes. Package still fails to build | Dennis E. Mungai | |
| Investigate and patch later. | |||
| 2016-03-19 | ported gtest to guix | Dennis E. Mungai | |
| Cleanup pending. Package builds. Need to trim inputs. | |||
| 2016-03-18 | fix conflict | pjotrp | |
| 2016-03-18 | Merge branch 'master' into dennis | pjotrp | |
| 2016-03-18 | Mereg | pjotrp | |
| 2016-03-18 | Added clBLAS | Dennis E. Mungai | |
| Build fails due to googletest's missing target "install". Investigating. | |||
| 2016-03-18 | Ported clFFT to GNU Guix | Dennis E. Mungai | |
| Package builds successfully. | |||
| 2016-03-18 | Package now builds on GNU Guix | Dennis E. Mungai | |
| Caveats: Only the CPU back-end builds at the moment. Needed inputs for OpenCL backends: clFFT and clBLAS. | |||
| 2016-03-18 | Use proper formatting for License lists | Dennis E. Mungai | |
| Also updates the Arrayfire fetch URL to the one hosted by Arrayfire as Github's generated tarballs do not package the required submodules. | |||
| 2016-03-18 | WIP: Add varscan. | Roel Janssen | |
| The JAR construction cannot contain a wild-card. That has to be fixed. | |||
| 2016-03-18 | Bump version to v3.3.3 | Dennis E. Mungai | |
| Also change licensing schema with #prefix (es). Solves namespace problems. Also added wget as an input (As it's needed as a fallback incase checksums for Boost are invalid). | |||
| 2016-03-16 | Add delly. | Roel Janssen | |
| 2016-03-16 | Add contra. | Roel Janssen | |
| 2016-03-15 | Added Java packages, working, WIP and ON HOLD. | Roel Janssen | |
| 2016-03-12 | Add a few more deps (needed glut) | Dennis E. Mungai | |
| Intel's Beignet package still can't build on guix, complains about libclang. | |||
| 2016-03-12 | Add Intel Beignet to guix | Dennis E. Mungai | |
| This is Intel's Beignet, Intel's OpenCL platform for their GPUs and CPUs. | |||
| 2016-03-12 | WIP | Dennis E. Mungai | |
| Work in progress. Investigate, | |||
| 2016-03-11 | Merge branch 'master' of https://github.com/genenetwork/guix-bioinformatics | Roel Janssen | |
| 2016-03-11 | Added test suite to pindel package. | Roel Janssen | |
| 2016-03-11 | Small compile fixes for pindel | pjotrp | |
| 2016-03-10 | Merge branch 'master' of https://github.com/genenetwork/guix-bioinformatics | Roel Janssen | |
| 2016-03-10 | Add multiple packages. | Roel Janssen | |
| - tabixpp - smithwaterman - multichoose - fsom - filevercmp - fastahack - bash-tap - vcflib | |||
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index : guix-bioinformatics | |
| Bioinformatics packages for GNU Guix |
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