| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-06-28 | genenetwork-full-system: Do synchronised release | Frederick Muriuki Muriithi | |
| Do a syncronised release of the genenetwork full system (it's not actually full, since gn-uploader is not yet part of the release, but it's good enough), with the following commits for the various parts: * GeneNetwork2: deb8d7241f1ca05865fababc2799ead9a684f8be * GeneNetwork3: 9f27bdc3ca41e09a090093bc36f48851fcc4fc42 * gn-auth: c8658a764cf30605c6e5a1361dcd09ddd422e371 | |||
| 2024-06-22 | rename ratspub.scm to genecup.scm | Shepherd on Tux02 | |
| 2024-06-21 | ratspub: remove definitions as they are replaced by genecup | Shepherd on Tux02 | |
| 2024-06-21 | genecup: fix typo | pjotrp | |
| 2024-06-20 | genecup: use keras without tests | Pjotr Prins | |
| 2024-06-14 | gn-uploader: (javascript-jquery): New dependency | Frederick Muriuki Muriithi | |
| JQuery is needed to get the bootstrap plugins working correctly. | |||
| 2024-06-13 | gn-uploader: javascript-bootstrap: New dependency | Frederick Muriuki Muriithi | |
| Bundle javascript-bootstrap with gn-uploader for styling. | |||
| 2024-06-12 | gn-uploader: Fix indentation. | Frederick Muriuki Muriithi | |
| 2024-05-09 | Fix path to error GIFs. | Munyoki Kilyungi | |
| Co-authored-by: Alexander <alexanderkabua@gmail.com> | |||
| 2024-04-19 | gn: Add hifiasm. | Arun Isaac | |
| * gn/packages/bioinformatics.scm (hifiasm): New variable. | |||
| 2024-04-09 | gn: javascript: Fix failing javascript-xterm build. | Munyoki Kilyungi | |
| * gn/packages/javascript.scm (javascript-xterm): Update hash. [native-inputs]: Move this ... [propagated-inputs]: ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-04-05 | genenetwork2-stable: update hash | Pjotr Prins | |
| 2024-04-04 | Add recent javascript-d3 library | Pjotr Prins | |
| 2024-04-04 | javascript-d3panels: add variable and add to genenetwork2 | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: update hash | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: modify files that use R scripts | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: modify files using R scripts | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: copy other R scripts into destination | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: copy R script into destination | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: patch path to R script - missing bracket | Pjotr Prins | |
| 2024-04-03 | genenetwork3-stable: patch path to R script | Pjotr Prins | |
| 2024-04-02 | genenetwork3-stable: Update commit and hash. | pjotrp | |
| 2024-04-02 | genenetwork3-stable: Update commit and hash. | pjotrp | |
| 2024-04-02 | gn-uploader: update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-04-01 | gn: genenetwork3-stable: disable testing for now | pjotrp | |
| * gn/packages/genenetwork.scm (genenetwork3-stable) disable testing | |||
| 2024-04-01 | gn: genenetwork3: sorted package names and moved python-test and ↵ | pjotrp | |
| python-test-mock into propagated inputs * gn/packages/genenetwork.scm (genenetwork3) [propagated-inputs]: add testing | |||
| 2024-04-01 | gn: Add genenetwork3-production variant | pjotrp | |
| * gn/packages/genenetwork.scm (genenetwork3-stable): New variable. | |||
| 2024-04-01 | gn: genenetwork3: sorted package names and added R to propagated inputs to ↵ | pjotrp | |
| make Rscript available on the path * gn/packages/genenetwork.scm (genenetwork3) [propagated-inputs]: Add r. | |||
| 2024-04-01 | gn: genenetwork3: reformat package list AND fix tabs2spaces | pjotrp | |
| * gn/packages/genenetwork.scm (genenetwork3) | |||
| 2024-03-24 | genenetwork-stable: fix URL problem R/qtl api | pjotrp | |
| 2024-03-21 | gn: genenetwork3: Add python-biopython. | Alexander_Kabui | |
| * gn/packages/genenetwork.scm (genenetwork3) [propated-inputs]: Add python-biopython. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-03-21 | gn-uploader: update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-03-19 | Add javascript-linkify, javascript-linkify-html to genenetwork. | Alexander_Kabui | |
| * gn/packages/genenetwork.scm (genenetwork2) [propagated-inputs]: Add javacript-linkify and javascript-linkify-html. Acked-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-03-19 | gn: javascript: Add javascript-linkify, javascript-linkify-html. | Alexander_Kabui | |
| * gn/packages/javascript.scm: (javascript-linkify): New package. (javascript-linkify-html): New package. Acked-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-03-19 | gn-uploader: update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-03-15 | gn-uploader: Update commit and hash. | Frederick Muriuki Muriithi | |
| 2024-03-13 | genenetwork2: Update commit and hash - get commit with bugfixes. | Frederick Muriuki Muriithi | |
| 2024-03-11 | gn: Add genenetwork2-production variant | pjotrp | |
| * gn/packages/genenetwork.scm (genenetwork-stable): New variable. | |||
| 2024-03-11 | gn: Add python-toil. | Arun Isaac | |
| * gn/packages/cwl.scm (python-toil): New variable. | |||
| 2024-03-11 | gn: Add python-cwltool. | Arun Isaac | |
| * gn/packages/cwl.scm (python-cwltool): New variable. | |||
| 2024-03-11 | gn: Add python-prefixed. | Arun Isaac | |
| * gn/packages/python.scm (python-prefixed): New variable. | |||
| 2024-03-11 | gn: Add python-pypubsub. | Arun Isaac | |
| * gn/packages/python.scm (python-pypubsub): New variable. | |||
| 2024-03-11 | gn: Add python-enlighten. | Arun Isaac | |
| * gn/packages/python.scm (python-enlighten): New variable. | |||
| 2024-03-11 | gn: Add python-addict. | Arun Isaac | |
| * gn/packages/python.scm (python-addict): New variable. | |||
| 2024-03-11 | gn: Add python-typing-extensions-4.10. | Arun Isaac | |
| * gn/packages/python.scm (python-typing-extensions-4.10): New variable. | |||
| 2024-03-11 | gn: Add python-rdflib-jsonld. | Arun Isaac | |
| python-rdflib-jsonld has been removed from upstream Guix. * gn/packages/python.scm (python-rdflib-jsonld): New variable. | |||
| 2024-03-08 | gn-uploader: Use more modern list-style inputs. Fix version number. | Frederick Muriuki Muriithi | |
| 2024-03-08 | gn-uploader: Update package definition | Frederick Muriuki Muriithi | |
| 2024-03-06 | genenetwork2: update commit and hash | Frederick Muriuki Muriithi | |
| Removes use of configs from `gn2.utility.tools` module since they are not up to date. | |||
| 2024-03-05 | genenetwork2: update commit and hash to fetch configs from app | Frederick Muriuki Muriithi | |
 |
index : guix-bioinformatics | |
| Bioinformatics packages for GNU Guix |
| aboutsummaryrefslogtreecommitdiff |