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2020-02-10Merge branch 'master' of ↵pjotrp
http://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics
2020-02-10Updatepjotrp
2020-02-09gn: Upstream more crates.Efraim Flashner
2020-02-06gn: ratspub: Patch javascript referencesEfraim Flashner
2020-02-05gn: ratspub: Update to 0.1.Efraim Flashner
2020-02-05gn: edirect binary seems to have been modified againEfraim Flashner
2020-01-30Merge branch 'master' of gitlab.com:genenetwork/guix-bioinformaticspjotrp
2020-01-26gn: copy package-with-explicit-python.Efraim Flashner
The magic '@@' no longer works since the upstream switch to guile3.0
2020-01-22gn: rust-qtlreaper: Enable tests.Efraim Flashner
2020-01-21gn: Update rust cratesEfraim Flashner
2020-01-20gn: Fix module importsEfraim Flashner
2020-01-20gn: Some node packages upstreamedEfraim Flashner
2020-01-19gn: adjust for python-lxml moving modulesEfraim Flashner
2020-01-16gn: Add genenetwork1Efraim Flashner
2020-01-16gn: python2-htmlgen-gn: Fixup packageEfraim Flashner
Re-indented the whole package Updated the package to work with python-2.7.
2020-01-15gn: Add python2-htmlgen-2.2.Efraim Flashner
2020-01-14Disabled tests on python-vcfjupyterYour Name
2020-01-11Bump CTLPjotr Prins
2020-01-09gn: edirect-gn: Use an alternate xtract.LinuxEfraim Flashner
2020-01-05gn: Fix uglify-js import moduleEfraim Flashner
2020-01-03gn: update jupyterhub, the-littlest-jupyterhubEfraim Flashner
2020-01-03gn: Fix kubernetes phase orderEfraim Flashner
2020-01-03gn: Package some node packagesEfraim Flashner
2020-01-03gn: Remove upstreamed rust packagesEfraim Flashner
2019-12-29gn: kubernetes@1.16: Fix version string.Efraim Flashner
2019-12-29gn: kubernetes: Patch reference to mountEfraim Flashner
2019-12-25gn: Update kubernetes packages.Efraim Flashner
2019-12-24update BNW and serviceEfraim Flashner
2019-12-22gn: python24-piddle: Build with python24-setuptools.Efraim Flashner
* gn/packages/python24.scm (python24-piddle)[native-inputs]: Add python24-setuptools.
2019-12-22gn: Update bnw serviceEfraim Flashner
2019-12-22gn: Add php-5.6Efraim Flashner
2019-12-22Revert "Removed python-science and crates-io to build with latest guix"Efraim Flashner
This reverts commit adbf2a07ea0274f718b60ef5ba3a7786360552d1.
2019-12-22Removed python-science and crates-io to build with latest guixpjotrp
2019-12-18wip: singlecellrshiny is not yet completeEfraim Flashner
2019-12-18Update bnw package and service.Efraim Flashner
2019-12-10gn: Remove r-qtl2.Efraim Flashner
This package is now upstream.
2019-12-09gn: Remove python-pytest-timeout.Efraim Flashner
Package upstreamed.
2019-12-09gn: Remove python-ujson.Efraim Flashner
Package upstreamed.
2019-12-09gn: Remove gunicorn.Efraim Flashner
This package was upstreamed.
2019-12-09gn: Remove python-async-timeout.Efraim Flashner
This package is already upstreamed.
2019-12-04gn: Add r-qtl2.Efraim Flashner
2019-12-03gn: ratspub: Update package and definition.Efraim Flashner
2019-12-03gn: Adjust import for upstream changesEfraim Flashner
2019-12-02gn: edirect-gn: Install more files.Efraim Flashner
2019-12-01gn: python-flufl: Fix descriptionEfraim Flashner
2019-11-25gn: seqwish: Link against dynamic sdsl-lite library.Efraim Flashner
2019-11-25gn: boost-static: Upstreamed.Efraim Flashner
* gn/packages/boost.scm (boost-static): Remove variable.
2019-11-25gn: gitea: Update to 1.9.6.Efraim Flashner
2019-11-25gn: Remove sdsl-lite-gn.Efraim Flashner
We can use libdivsufsort from (gnu packages bioinformatics). * gn/packages/bioinformatics.scm (sdsl-lite-gn): Remove variable. (seqwish, graphaligner)[inputs]: Remove sdsl-lite-gn. Add sdsl-lite, libdivsufsort. [arguments]: Adjust for change in inputs.
2019-11-24gn: Add graphaligner, mummer.Efraim Flashner
* gn/packages/bioinformatics.scm (graphaligner, mummer): New variables.
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