aboutsummaryrefslogtreecommitdiff
path: root/gn/packages/python.scm
AgeCommit message (Collapse)Author
2020-10-27gn: python2-parallel: Remove upstreamed python2 libraryBonfaceKilz
2020-10-08gn: Add new package python-rpy2-2.9BonfaceKilz
* gn/packages/python.scm (python-rpy2-2.9): Add it. Breaking changes are introduced in v3.0.0. See https://rpy2.github.io/doc/latest/html/changes.html#release-3-0-0
2020-10-08gn: Update python2-parallelBonfaceKilz
* gn/packages/python.scm (python2-parallel): Update to v1.6.6; v1.6.4 is no longer available from the website.
2020-09-27Added python testing framework packagespjotrp
2020-08-28New package python-pandas-plinkpjotrp
2020-08-09Remove upstreamed python packages.Efraim Flashner
upstreamed python-certipy, python-pamela, python-cfgraph. python-retrying already upstream
2020-08-09gn: python-schema-salad: Use same version of python-ruaml.yaml asEfraim Flashner
bh20-seq-resource
2020-08-05gn: python-htmlgen: Update to 2.0.0BonfaceKilz
* gn/packages/python.scm (python-htmlgen): [version]: Bump version to 2.0.0. [source]: Update hash. [propagated-inputs]: Remove "python-typing" since it causes errors to be raised when importing htmlgen in python3.8. Also, in Python 3.8 it's already provided by the standard library.
2020-07-19gn: Update python-schema-salad to 7Efraim Flashner
2020-07-19gn: python-schema-salad-7: enable tests.Efraim Flashner
2020-07-19gn: Update cwltool to 3.0.20200710214758Efraim Flashner
2020-06-28gn: Prepare bh20-seq-resource for serviceEfraim Flashner
2020-06-25gn: Update bh20-seq-resource to 1.0-3.ae4cb3c.Efraim Flashner
2020-05-28python-ruamel: upstream works when tests are disabled in python-schema-saladPjotr Prins
2020-05-14python-arvados-python-client: runtime dependencies.pjotrp
2020-05-11replace libjpeg with libjpeg-turboEfraim Flashner
2020-05-07gn: Finish python-pyshex and dependants with testsEfraim Flashner
2020-05-07gn: Add python-pyshexc and dependants.Efraim Flashner
2020-05-06define-public python-cfgraphpjotrp
define-public python-pbr define-public python-pyshex
2020-04-21gn: python-rdflib-jsonld upstreamed.Efraim Flashner
2020-04-21rearrange and deduplicate some packagesEfraim Flashner
2020-04-21gn: python-rdflib-jsonld: Update to 0.5.0.Efraim Flashner
2020-04-21Add missing module importEfraim Flashner
2020-04-19gn: Update bh20-seq-resource.Efraim Flashner
2020-04-12gn: remove upstreamed packageEfraim Flashner
2020-04-07gn: Upstream 2 python packagesEfraim Flashner
2020-03-12gn: remove upstreamed packageEfraim Flashner
2020-03-12gn: Add grocsvs and dependenciesEfraim Flashner
2020-02-10Updatepjotrp
2020-01-30Merge branch 'master' of gitlab.com:genenetwork/guix-bioinformaticspjotrp
2020-01-19gn: adjust for python-lxml moving modulesEfraim Flashner
2020-01-16gn: python2-htmlgen-gn: Fixup packageEfraim Flashner
Re-indented the whole package Updated the package to work with python-2.7.
2020-01-15gn: Add python2-htmlgen-2.2.Efraim Flashner
2020-01-14Disabled tests on python-vcfjupyterYour Name
2019-12-09gn: Remove gunicorn.Efraim Flashner
This package was upstreamed.
2019-10-22gn: Add python2-plotly-3.2.1.Efraim Flashner
* gn/packages/python.scm (python2-plotly-3.2.1): New variable.
2019-09-06tarballPjotr Prins
2019-09-06Add link to sourcesPjotr Prins
2019-09-06Added old pil packagePjotr Prins
2019-09-06Cleaning up genenetwork2 build.Pjotr Prins
Remove pylmm and r-phewas. Added rust-qtlreaper Fixed python-setuptools warning
2019-09-05Disable small files and rpy2 tests (one fails)Pjotr Prins
2019-07-29gn: python-shellescape: Clean up package definition.Efraim Flashner
* gn/packages/python.scm (python-shellescape): Re-indent. [source]: Use pypi uri. [inputs]: Move python-setuptools ... [native-inputs]: ... to here. [license]: Use 'license' prefix.
2019-07-29gn: python-subprocess32: Correctly mark as version 3.5.3.Efraim Flashner
* gn/packages/python.scm (python-subprocess32): Re-indent. [version]: Correct to 3.5.3, which is what the source was downloading. [source]: Use pypi uri.
2019-07-29gn: python-typing-extensions: Clean up package definition.Efraim Flashner
* gn/packages/python.scm (python-typing-extensions): Re-indent. [source]: Use pypi uri.
2019-07-29gn: python-bagit: Clean up package definition.Efraim Flashner
* gn/packages/python.scm (python-bagit)[source]: Use pypi uri. [synopsis, description]: Update.
2019-07-14gn: Add python2 versions of GN1 thirdparty packages.Efraim Flashner
2019-07-14gn: Add python2-piddle-1.0.15.Efraim Flashner
* gn/packages/python.scm (python2-piddle-1.0.15): New variable. * gn/packages/python24.scm (python24-piddle): Inherit from python2-piddle-1.0.15.
2019-07-14python2-pil1: Update to 1.1.7.Efraim Flashner
* gn/packages/python.scm (python2-pil1): Update to 1.1.7. [source]: Use upstream source. Update source snippet. [inputs]: Add lcms, tcl. Remove python2-setuptools. [arguments]: Build without setuptools. Update custom 'link-libraries phase. [description]: Update.
2019-07-02gn: Add python-plotly-3.2.1.Efraim Flashner
Add dependant library python-retrying.
2019-06-27gn: move python2.4 to its own moduleEfraim Flashner