| Age | Commit message (Expand) | Author |
|---|
| 2021-12-09 | gn: genenetwork: Define version using git-version....Also, semantic versioning starts from 0.1.0, not 0.0.1.
* gn/packages/genenetwork.scm (genenetwork3)[version]: Use
git-version.
| Arun Isaac |
| 2021-12-09 | gn: genenetwork: Reorganize inputs....* gn/packages/genenetwork.scm (genenetwork3)[propagated-inputs]:
Remove python-sqlalchemy-stubs. Add python-sparqlwrapper and
rust-qtlreaper. Sort all inputs.
| Arun Isaac |
| 2021-11-17 | gn: genenetwork: Add javascript-xterm , javascript-xterm-style, javascript-xt...... * gn/packages/genenetwork.scm(genenetwork2) [propagated-inputs]: Add javascript-xterm , javascript-xterm-style and javascript-xterm-addon-fit
| Alexander Kabui |
| 2021-11-05 | gn: genenetwork: Remove unused package inputs | BonfaceKilz |
| 2021-11-05 | gn: genenetwork: Delete dead comments | BonfaceKilz |
| 2021-11-04 | gn: Update genenetwork3 to 0.0.1-guix-9e0fa5f | BonfaceKilz |
| 2021-11-01 | gn: Add python-pingouin...* gn/packages/genenetwork.scm (genenetwork3)[propagated-inputs]: Add
python-pingouin
| BonfaceKilz |
| 2021-10-27 | gn: genenetwork: Add python-deprecated...Only used when deemed necessary.
| BonfaceKilz |
| 2021-10-06 | gn: Update genenetwork3 to 0.0.1-guix-77c274b | BonfaceKilz |
| 2021-09-29 | gn: Add r-wgcna, r-rjson to genenetwork3....* gn/packages/genenetwork.scm(genenetwork3) [propagated-inputs]: Add r-wgcna an r-rjson
| Alexander Kabui |
| 2021-08-28 | Moved packages into past/genenetwork1 and packages/pangenome to reduce chance of...breaking the main genenetwork packages.
| pjotrp |
| 2021-08-28 | Remove golang module loader | pjotrp |
| 2021-08-24 | genenetwork[23]: updated git checkout and commented out DAG generation | Pjotr Prins |
| 2021-08-20 | gn: Add missing import | Efraim Flashner |
| 2021-08-18 | Remove csv-diff from channel....This is already packaged upstream.
* gn/packages/genenetwork.scm: Remove "(gn packages golang)" import.
* gn/packages/golang.scm: Delete file.
| BonfaceKilz |
| 2021-08-16 | gn: Add toolbar overlay for debugging genenetwork2...* gn/packages/genenetwork.scm (genenetwork2)[propagated-inputs]: Add
python-flask-debugtoolbar
| BonfaceKilz |
| 2021-08-16 | gn: start moving calculated files to build separately | Efraim Flashner |
| 2021-08-15 | gn: genenetwork2: Don't hardcode python version. | Efraim Flashner |
| 2021-08-12 | gn: genenetwork: Remove "#:python ,python-wrapper" from "arguments"...This fixes this error:
guix package: error: /home/bonface/projects/guix-bioinformatics/gn/packages/genenetwork.scm:295:4: package `genenetwork2@3.11-guix-84cbf35' has an invalid input: ("python" python-wrapper)
| BonfaceKilz |
| 2021-08-11 | gn: fix genenetwork2 package definition | Efraim Flashner |
| 2021-08-11 | fixup genenetwork2 | Efraim Flashner |
| 2021-08-09 | gn: Adjust genenetwork2 for removal of python2-genenetwork2 | Efraim Flashner |
| 2021-08-07 | python2-genenetwork2: remove unused Python2 version of genenetwork | pjotrp |
| 2021-08-05 | gn: Update genenetwork3 to 0.0.1-guix-487e50e | BonfaceKilz |
| 2021-08-03 | gn: genenetwork3: Add csvdiff as a propagated input | BonfaceKilz |
| 2021-08-02 | gn: code updates | Efraim Flashner |
| 2021-07-12 | gn: Update genenetwork3 to 0.0.1-guix-7d22039 | BonfaceKilz |
| 2021-07-11 | gn: Add python24-direct....* gn/packages/python24.scm (python24-direct): New variable.
* gn/packages/genenetwork.scm (genenetwork1)[propagated-inputs]: Add
python24-direct.
| Efraim Flashner |
| 2021-07-11 | Added GNU parallel to genenetwork2 | pjotrp |
| 2021-06-07 | gn: Update genenetwork3 to 0.0.1-guix-3881b50 | BonfaceKilz |
| 2021-05-27 | gn: Update genenetwork3 to 0.0.1-guix-cd08b40 | BonfaceKilz |
| 2021-05-13 | gn: Update genenetwork3 to 0.0.1-guix-09f6992 | BonfaceKilz |
| 2021-05-13 | genenetwork2: add python-configparser | Pjotr Prins |
| 2021-05-13 | gn: Add r-qtl, r-stringi to genenetwork3....* gn/packages/genenetwork.scm (genenetwork3) [propagated-inputs]: Add
r-qtl and r-stringi.
| BonfaceKilz |
| 2021-05-12 | Made python3-genenetwork2 the default! | Pjotr Prins |
| 2021-05-12 | gn: Add r-optparse to genenetwork3...* gn/packages/genenetwork.scm (genenetwork3) [propagated-inputs]: Add
r-optparse
| BonfaceKilz |
| 2021-05-10 | gn: genenetwork: Add genenetwork3 as input....* gn/packages/genenetwork.scm (python3-genenetwork2) [propagated-inputs]: Add
genenetwork3.
| BonfaceKilz |
| 2021-05-10 | gn: genenetwork: Remove racket-minimal from gn2 inputs....* gn/packages/genenetwork.scm [propagated-inputs]: Remove racket-minimal.
| BonfaceKilz |
| 2021-05-10 | gn: genenetwork: Add genenetwork3....* gn/packages/genenetwork.scm (genenetwork3): New variable.
| BonfaceKilz |
| 2021-05-10 | gn: genenetwork: Add autopep8 and pylint to python3-genenetwork2....* gn/packages/genenetwork.scm (python3-genenetwork2) [propagated-inputs]: Add
python-autopep8 and python-pylint.
| BonfaceKilz |
| 2021-04-20 | gn: genetwork: Propagate python-rpy2-next...* gn/packages/genenetwork.scm (python3-genenetwork2)
[propagated-inputs]: Use python-rpy2-next.
| BonfaceKilz |
| 2021-02-05 | gn1: make run in a container | root |
| 2021-02-05 | Move packages to genetwork1 propagated inputs...* gn/services/genenetwork.scm: Move some package defs to ...
* gn/packages/genenetwork.scm [propagated-inputs]: ... here.
| BonfaceKilz |
| 2021-02-03 | gn: javascript: Add javascript-font-awesome...* gn/packages/javascript.scm: (javascript-font-awesome): New package.
* gn/packages/javascript.scm: (genenetwork2) [propagated-inputs]: Add
javascript-font-awesome.
Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com>
| Alexander Kabui |
| 2021-01-31 | gn: javascript: Replace javascript-zxcvbn-async with javascript-zxcvbn...Signed-off-by: BonfaceKilz <me@bonfacemunyoki.com>
| Alexander Kabui |
| 2021-01-12 | gn: genenetwork1: Create "useralt" and replace "user" with it...* gn/packages/genenetwork.scm (genenetwork1):
[arguments]: In 'changes-for-deployed-service, copy "web/webqtl/user" to
"web/webqtl/useralt" and replace how "user" is imported in
"web/webqtl/main.py"
| BonfaceKilz |
| 2020-12-15 | gn: rust-handlegraph-0.3, rust-ndarray-0.12 upstreamed | Efraim Flashner |
| 2020-12-06 | gn: python3-genenetwork2: Generate svg graph from python3-package...* gn/packages/genenetwork.scm (python3-genenetwork2):
[native-inputs]: Add graphviz.
[arguments]{generate-dag-svg-file}: New phase.
| BonfaceKilz |
| 2020-12-06 | gn: python3-genenetwork2: Remove unnecessary begin form...* gn/packages/genenetwork.scm (python3-genenetwork2):
[arguments] {generate-graph}: Remove begin form.
| BonfaceKilz |
| 2020-12-04 | gn: python3-genenetwork2: Generate graph from python3-package...* gn/packages/genenetwork.scm: Add new #:use-modules: (guix graph) (guix
scripts graph) (guix store)
(python3-genenetwork2)[arguments]{generate-graph}: New phase after install
that uses d3js to generate a new graph which uses d3js as a backend.
| BonfaceKilz |
